| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
| No map location |  |
No map location |
Predicted Genes from contig_39557
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_54997 |
1 |
534 bp |
MLOC_54997.1 |
Available |
Available |
LOC_Os06g50070.1, FRAME:+2, EVALUE:5e-11, 13106.m05378 protein expressed protein |
| MLOC_54998 |
2 |
1768 bp |
MLOC_54998.1 |
Available |
Available |
LOC_Os06g50050.1, FRAME:-1, EVALUE:0.0, 13106.m05375 protein AAA-type ATPase family protein, putative |
| MLOC_54996 |
1 |
3169 bp |
MLOC_54996.1 |
Available |
Available |
LOC_Os06g50060.1, FRAME:+1, EVALUE:4e-91, 13106.m05377 protein ras-related protein, putative, expressed |
CDS Structure of MLOC_54997
CDS Structure of MLOC_54998
CDS Structure of MLOC_54996
Contig Sequence (8063 bp)
>contig_39557 8063 assembly3_WGSMorex_rbca.fasta
GCCTGGAGGAGCCTGACGCGCGGGTGGGCGCGCTGGTGCGGCTGCTCGTCGGCAAGGGCA
AGGCCGCCATGGTCGCGGACGTCATGGCCGAGTTCGCCGCCCTCTGCGACCACCTGCTCG
CCCCGCCGCCGCCGTCCTCGACCTCGACCAGGAGCAAGCGCGCCCACGGCCCCGCCCACT
ACGACTAGCGCTTGACGCGCGTACGTGCCATGCTATCTTTTCGGTTCGTACTACTTCAGA
GGATTGTTGGCTGGTGCATGCACATGCACGTACGTACCGCCGGTGTCCATCTGCTTGCTA
TAGTATTGTGATTGTGTAATTGATGACTGTGAGCACTTTCCATGCGCGTACGCGTCACAG
ATCTTCTGTCCAACTGCTTGCCACCATGATAATATTGTAGTCGATCGAACGCAGATGTTT
CTAGTCATGTAGATAAGGCCAGTCAACCGCTCCGAACTAAAACAATTCGTGATTGAGAGG
TGCCCCTGCCCGCTGAACATTATGCAATGCATAGTGCCAGCCCTGTCATGCCCCCAATAT
AATACTTGTACTGTCTGCCTGAGCTGTCGCGTACGTAGAAGAGACCGATTAATAACTGAA
AAGCTTCAACTAAGAGTTGAGACTTGGACGCAATAATCGACCAGGCAGCTGCTACGCACT
GTTGCTTCCTGCCTTGTTGTAAAGAAGGGTTGGCATCATGGCATGGCATGGCATGCAGTT
GAATTAAGAGATTCATCACAGCATGCATGCAATATAATGGAAGACGAAATCCATCCGTCT
CCATCGACCGATGGGTCGCTCGGGCCGACCAATCAACGTGAAGGAGTGATCAGGTTAGGC
ACCGCGTGACACACGAGCCCGTGTGACATCCGGCGACGTCGATCCTGGCGATTGTATATG
ACTTGCACGCATACTAATCCTCAACCAACTGCCGTGGATCTATATATTCTGTGGCCACAT
GCATGCTGACATGTGATACTACTGTTTTTGTTTTCACCGTCGGATTCTTCTGTGTCAAAG
GGCAGAACATATAGGGCAGGAAATGGAGTGGACACACACACACGGCTGGCCTTATGTGGT
GGATTTGGAATATATGAATGAATGGATGGATGAATGAATGATGGATCATGCGTGCATGAG
GATCGGCTTTCTACCTAATCAACTTTGTGGAGGAATACTTGGTGAAAGAAAGGGAAATAT
TAAAGCTACGTACGTACTGTACGCGTCCTGCGTACTCTACAATGAGTGCCGAAAGAGAAA
GGCGCCGGAGGCAGGCAGGCAGTACGTACCCGGCTACGTGTACGTAAGCAGTTGGATATC
ACTAGCGGCTATGATGAACCAAGAACAACACTTTGATCTTGAAGGAAAAAAAAAGGCAGG
ACAACTAATAAAACATAACATGAAAATGGACAAAAAAATAATCAATCAAATACTAGTAGC
AGATAGCGCCTCCATTACTATAGTGGGAGCAGCGGTGCAAGTGCAAGTGAGCAACCCCCT
CCTTTCAACCACTCTCCGGCCCCTGCGTCACCAACATAATTTATATAGGAGCACTACACA
AGCAGAGGCACGGATGTCAGACGACATACACGCATGAGCTAGCTCCTAGATTGTGTCTGA
TACCGGCCGCCGTATACAGGTGCAGCTTGCGTTCGGACCGATCGCCGGAGGCAGACGGCA
GAGCGATGGAGGAGCCGGACTACGTGTTCAAGGTGGTGGTGATCGGCGACTCGGGGGTGG
GCAAGACGCAGCTGCTGGGGCGCTTCACGCGGGGCGACTTCTGCCTCGACTCCAAGTCCA
CCATCGGCATCGAGTTCCAGACGCGCACCGTCGACATCGCCCGCCGCCGCGTCAAGGCCC
AGATATGGGACACCGCCGGCCAGGAGCGCTACCGTGCCGTCACCAGCGCCTACTACCGTG
GCGCGCTGGGCGCCATGCTCGTCTACGACGTCACCCGCCGGGACTCCTTCGGGCACGCCG
CGCGCTGGGTCGCCGAGCTCCGCGCCCACGCCGACAAGTCCATCGTCGTCGCGCTCGTCG
GCAACAAGGCCGACCTCGCCACCGCCGCGCCGGCGCGTCGGGAGGTCGGGGCCGACGAGG
CCGAGGCCTTCGCGGAGGAGCAGGGGCTCTTCTTCTACGAGGCGTCCGCGCTCAGCGGCG
ACAACGTCGAGGCCGCCTTCCTCGGCCTGCTCGAGGAGATCCACGCCGCCGTGTCCAGGA
AGCCGCTGGAGGCGGCGAGGGGCAACGGGGATGGCGACGACGACGTCCTGGTGCTCAAGG
GCATCTCGCTGTCGCAGGAGCTGTCCATGATGGAGACCAGCGCCATGAAAACACCGAGCA
GGTGCTCTTCATGCTCCTCGTGATACCATACGACACGATACCATACCATATGATGTATTC
AGCGATTAATCTTAGCAGAAAATACAAACGTCTCTTCATGCTCTCCACCAAGCGTGATGA
AGACATCAAGCAAGTGCTCTTCATGCTCGTGATATTATGATACCTATAGACTGATAGATT
CAGCAATTCTTGACTGAAAATACAAGCGTCATTGATCGTTTATCTCGTATTGGTGCTCGC
CTCATCCAAGGTGAAAGAGAAGGCAAAGGGTCCCAGGACAAGTGATGTAAATAATGTTCA
GATGATATGAATATGAAAAGAAACAATGGTGTTTGTGAACCGTGGAATGATGATGGAAGG
GCACATTTCTTCAGTACGTATTAGAGTCTGTCTACCCTACAATAGTCATGTTCCAAAAGG
AAAATTACAAGGTGACGAACAGACCAAATGTTCCACAGAAGTATAGAATTCTGTATTTTC
CACACAGAGAACCATGGAACCCAAAACATCAGTGCAGGCTTTGCCAGCTGCAATTAACTT
CAAAAACCAGAGAGCAGCCCCATGACGCTAACCGAACCAATACATATGCTGAATCTAGGT
AGGTAATGCCAGCTCTTACTCCACTGCGGATTTTTCAGAGATCTAGCAAAAGGAAAACCT
TTAAGGTGAAGATGGCTCCTGCGGTTCCGACTGACTGTTCTGAACTATTCGAGACATCAG
CTTAGATATCTCAAAGATTGCGCTCTGTACCTGGTCATCTTCAGGATCCGACGGACGGGT
CCACACAGGAGACTGGAAACCTGACGCCGCACCGCTTGCGGCCTTCTTTCCCTTTCTAGA
TGTTGAAAGAGCTTTCTCCAGGTCCGATTGCCTCAAGGCTCTTGGACTCTGAGGCAGCAA
TCACAAGCAAAAAATTCAGAACCAATACATAATAAAGAACTTGTGTTAATAGCTTTATGG
TCCTATTTCGCTATCCAGACATAAACGCTGAGGGGTTCCCAAACAAAAGGGAACTTTCCT
GATAGGGTGGAATACCAAAGGGAAGTTAGATTCACTGTAGAGAAAGGTATTGAATACTCA
CGTTTGCTCTTGTCCCATCTTTCTCGCTGTTCAAAATCTCTCTGATAGGATAGAATGCAG
CCTGCTTGCACAGTTCTAGGATGTCTGACCCAGTAAAGCCCTCACACAAGCTGGCAATGT
AATCGTAATCAATGTTAGACTCGACGTTTTCTCCCTTCAGTATAACCTGAAGTATCTTGC
TTCTTTCACTGCGAGAAGGAACCCCAATTTCAAATATCTGCGTGAAGCGCCTGAGGATGG
CCTCATCTAGCTCGGAAGGTCTGTTTGTAGCAGCAAGCACCATCACACGTGCATTCTCTG
CACAACCATAATAATTGTCATGAGATATCGCTCCATACTATCTATGGAAGTTTCTATATG
GTAAGTTGCACATGCATATATAACATATTCACTATTTACAGATGTATCATATGCCAACCA
AAAATCTCATGTGACTAACCCAACTGGGCATCAGAACAAGTTTGGTTGATGAAAATTACA
TTCCTTTCATTCTCCAGGAAAAAAGAATTATCACATGTCCACCTTAGAGATCAAAAGTTT
ACATGTATAGCCACAACTACTTTTTATTATTATTACTTTTATCTTCTGTTAAGATTGCAA
CATCCTTTCCGCACTTGATATTCTGACATAAAAGGATATTTGCTAACTTAATATTGCCGT
ACTACTACAGCTTAAATTAAGCATCATTCACTCAAAAAAAAAAAGCATCACAGATCACAC
ACAAGCATGCAATGCATCGACGTGCGAAGTTCACATAAAATAATACTAACCACATAAAAG
CAACAAAAAAATAAATACATGTACGCAAAAGTAGATTTTGAGTGTCAGTTTTGCGTTAGG
TTGTTAGTCTAATTGCTAGACATTAGTTGCCCCAAGTTTGTTAAAAGCACCTCACCTCAT
ATGACTAGCAAGGACAAGTATATCTAAGATGTAGAACATAAAGTAAACTACTAACAGACT
CCTGTCTGCTCATTTAATTCTTACAGAAATACCTTTGTGACATAACATGCCATTACTATC
TAATTTTATCTTGAGATTTCTAAACTGAGGTGTAAGGTCAAGGGAGAGTACTCTGAACAA
AAAATGGCATGGTTGAAAACATTTTCACTCAAATAAAACAATAATCCAGGTGTCATACAA
ATTATATGAGCAGACCCGTGGATCTATGATCATGAGAATATCACTGGTACTAACAACCGA
ATCCAGTAAATTACTAAGTAAGACAAAAGTAGGCAATAAACAAGTACGGAGTAGTATTTA
TTCAGCGTAATTACATGAACAACACTTTTATGAAGTCAATTTCCCATAAACTTGGACAGC
AAATTTGTTATATTTACTGGTAGTACATTACTTAGGTTTAACTCAACATAACAAAGAATT
AAATTAGCATATAAATAATAGTAACACAAACTAAAAAAATTGCACGGTTTGAATGACAAA
AAATAGATTGTGTTGATACATGCTTTTATGGGGTGGAATCATGCAAGATCATCAAATTGA
TATGTATTGGACTGAGGTTGAGCGAACACATGTAAATTTTTACATAAATCTTAAAAATAC
GAATTATATACATGGTGTGAACATATACATTTTTTCTTTCTTTTGCCAGCACAGTTTTAA
TGGCGTAATATATTTGATAAGAGATGAAATCATGTAAATCCTCGACCGACTATTGAGTCC
AAGGGAACATTGAAGTAAATTGTATATATATCCTAATAATCCAAAGTAACAGATGTCTGT
AAGGTGCAAATTATCAGGAATACCTATTGTTAATAGACTGCTCTATGGTGTGACAGGACA
AACGTGCAACACAGGCTGGATGCAACACGCATCAGCTATACGTCATCAACTCATCATCAA
GCGTGTACGTGCACGGTTGATCGCGTGGCAGACTGTCATGCCATAGGACTTGGTTGCGCA
TGTTAGTGCGTTATAATTGCCGTTCGTTAATACATGCATTTATAGTGCAATTTTAATGAC
ATTACTTTTCAGTACAGACCAATATGTAAAGTACTCGGATATGTGGCATGTGTCTAATTG
TTATCTGCATGCAGACTGCTACTCTAAGAGGCCAGATACGACTACTTTATAACATTGTTC
GTAGATATAAACCTGTATTACAAACAAAAGAATGTTTCTTTCGCCAGAACGGTTCTAATG
GGGTAATATACTTGATAGAGATGAAATCATGTAAATCCTCGACTGACTATTGAGTCCGAG
GGGACATTGAAGTAAATTGTATACAAATCCTAATAATCCAAAATAACATATGTCTGTAAC
ATGCAAATTATCAGGAGTACATTTTGTTAATGGACTGTTCTATGGCGCGAAAGGACAAAC
GCGTGGATGCAATATGCATCAGATATACGCCATCAACTCATCATCGAGCGTGTGTGCGCA
CGGCCGATCACCTGGTTGTGCACGTCATTATGTTACGATTGTCGTTTGTCAATACATACT
TTGACCAAAAAACTTTTAAGTACAGACCAATATCTGAAGTCCTCGGATAGTGGCATGTGT
CTAATTGTTAGCTGCATGCAGTGATGCAGACTGCTACTCTTAGAGGCCAGATACCACTAC
TTTATAACGCTGTTCGTAGATATAAACATGTATTATAAACAAAAGAATGTTTCGTTGGCC
AGAACGGTTCTAATGGGGTAATATACTTGATAGAGATGAAATCATATAAATCCTCGAGTG
ACTACCGAGTCCAAGGGAACGTTGAAGTAAATTTGTACACAAATCCTGATAATCCAAAAT
AACAGATGTCTGTAACGTGCAAATTATCAGGAGTACATTTTGTTAATGGACTGCTCTATG
GCGCGGCAGGACAAATGTGTGGATGCAACACGCATCAGCTATACGCCATCGACTCATCAA
TGAGCGTGTGTGTGCACGACTGATCACGTGGTTGCGCACGTCAGCACGTTATGATTGTTG
TTTGTCAATACATACCAATATGTGTAGTGCAATTTTGACCAAAAATCTTTTAAGTACAGA
CCAATATGTGAAGTCCTTGGATAGTGGCATTTGTCTAATTGTTAGCTTCATGCAGACTGC
TACTCTAAGAGGCCAAAACACTTTATAACGTTGTTAGCAAATACTTATGAACCTGTATTA
TAAATATATACAGTGTGTTATGAAAGCAACAAGGGAGAGTGCTCACGATCGGTGGTGAAA
CCGTCCCATAGAGACATGAACTCCGTCTTCATGTTAGTCAAAGCTTCATGGTCTGTGTTC
CGACGCTGTCCCAAGAAGCTATCGACCTCATCGATGAAGATAATGGCAGGCTGGAGCTTG
TTTGCCAGACTAAAGACGGCAGACACTGGCACAGGGTTACAGAAAATGAGCATCTTCACA
ACAGATATATACACGTCACGGAGCAAGATTTTTTTTTTGTCAGTACAGGAACAAGATTGG
AAGCAGGAAGGATGAATTCCAGCAAACAGGATAGAATCTTAGGAGGCGGCTTACCGAGCT
TCTGGGCGTCACCGAACCACTTGCTCATGAGATTGGATATCCTGACGTTGATGAAGACGG
CGCCCGACTCCTTGGCGATGGCCTTGGCCAGCATGGTCTTGCCGGTCCCTGGCGGGCCGT
AGAGGAGCACCCCCTTCTGCGGGCTGAGGAGCTTGCCGTAGGCGAAGAGCTCGGGGCGGC
GCAGGGGCAGGATGACGAGCTCGTAGAGCGCCTGCTTGACCTCGTCGAGGCCGCCGACGG
ACTCGAACTCGACGTCGATCTCGTCGGGGTTGATGACGTCGCACGCAATCACGTCCTGCG
AGCAATCCGGAGATTAGAGCCCTGGATTGGATTGGATTGGATTGGGTTCGGGGTGGAGGG
ATTGGAATGGGTGGAGGGTGGAGGGCGGTGACGCGCTACTACCTCGTAGGGGGTGGTGGA
GATGAGGGGCCTGCCGAGGCGCTTGGCGATCTCCTTCTTCTGCTGGAGCGCCTTCTTGGA
GGACTCGCGGTTGGGGTCGAGCTGGCGGAGGCCGGCGAAGAGGACGAGGCAGCTGAGCGC
CGCGCTCGCCGCGTACAGGACCAGCTCCTGCACGAACCGCGACGAGGAGTCCGTCGACCT
CATCGCCGCCGGCGGCCGCCGATTCCCCGACGCCCCCTCTCTGCCCGTCGTTGCTTGCGG
GGGAAGGGAAAGGGGGGGCGCGCGGGGGCGAGATGCGTGGGCGAGGGGGGTTGGATTCGT
CCGTGGAGGAAGGGGGGGGTGGAGAAGGGAAGACGGACGGGAGAAGGGATTGGGATTTTA
GGGGGCGGGTCGGTTCGGCTTGGCCTGGCTTTCGTTCAGCTTGGAGGAGGGTTTGGTCCG
GGTGGGAATGGGATGGGAAGGTGGATGACGGTTCTGGTCGCTGTTACGCTCAGTCTCTCC
GTGAATAGATTGGTTGGGTCCTCACCTGGCCAAACGGACCGGCCCGACACGGCCTGTGGT
AATCGGGCTGCCACGGCACGTTTATTAGTCGAGTAGTGTCATGTCGGTCCGTGGGCTGCG
TCTCTAGGCCCAAGCACGATCTGATTATTAAACGGGTCAACATGTTGGCCCGATTATCAC
GCTGGGCCGCAATTTTTTAGCCTTATGGGCTTATTTTAGGTTTATTGGACCGTATTCTTG
TATGTGTGTGTGTGTATATATAT
