Contig Data
morexGenes
Links



Map Locations of contig_39355 (5090 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_39355

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_54747 1 807 bp AK374684 Available Available None





CDS Structure of MLOC_54747






Contig Sequence (5090 bp)

>contig_39355 5090 assembly3_WGSMorex_rbca.fasta
GATCCACCCCCATCCCTAGACCGGTGAAGGACAGGGTTTTTTTTGAAAAAATAAAACGTT
TTTATTCCACTTAATCAGGGACCGCGGGTTGATTCCACGAAAACGGAGGGACTTTTTTTG
CAAAAATGCCATGACGGACAACCAGAAACCCTATTTGCTTTATTATTAGGGAGAGATTGA
TTGACATTGTGTCACGAAGATAAACTACTTCAGAAGATAGTTTCTTTCTTTCTTTTGGGG
GGGGGGGAACGCAAAGCCGTAAAAGGGGAGGTCATAAGTGTCTATATTGTAAAATCAATT
GATTTTCCAAACATAGTTGTCTTAGGGGTGACAACGGATCAAATTCAGGCGGACAATCCT
TACAATGTCATATTTCGTATTTACTTTCGGATCCGCAAGTAGAACAATGCGGACAATCCT
TACAATGTCATATTTCGTATTTACTTTCGGATCCGCAAGTAGAACAAATGCGGATTGGAA
TATCGGATTGTGCGGATTCCACATGGTTCAGTAAACGAATATCGAATTGTGCGATTTAGA
CATGAAATGATAGCGGAACGACGTCGGGCCAAAGTGGTCATTTATGATATTCAGATACAA
GGAATATATAAAAACTTAACCTAAAATTATACATAAACAATGAGCAAATATTAATAATTT
TGCATTGCAAGAACACATAAAGCACTAGATGTTATACTCCAAATAAATCACTAACAAGCA
TATTATCTCATAAGCAAAGATATCACACACATTTTGCTTGTTAAATACTTAAAACTTCAT
CCATAAATCAGTTTTGGTATTTAAAAGGCCGGACTACCCGGCTAGAGAAAACGGTTGTCC
AAATGCGTCGTACTACCCCCATTCCAAAATAAATGTCGCAGTTCTAGTTCAAATTAGTAA
TACCATATCGTCTCAATCAGATTTTCATTCGGATCGCATTGTTGTCAGATGTCAAAAATC
TCGCATCATATCCTATGAAGACGGCGGTTTCGGCCGGAAATTTCTTAAACACTTTCACCC
TTTGTCCGGCCTGGTGCGAAAAGATATCATTAGATGGGGCCTCGTTGCTTTCTTTGTGCG
TGTGGGCCATTGGGTGTGAAAGGCCAGTCTAAAGCTGGTGTAAGAGTCAGGGCCGGTCTT
GAAATTTTGAGAGCCCCCCTTGACGAGACTAGTATCTGAGGCTTCTTAGTATAATCATCA
AGATAATAATTTGTGTATAGAGAATGTTACTCGTATATTTCTTTTGACATTATCTGAGTT
TTTTCTTCTGACATTCATATATGCAAAGTCATTGTTGGTGATATCAATATTAATCCCATC
TAACAATTTCATATTAAATATGAACTTTTGTGAGAGGCATTTTAAATTAAATCTCCCAAT
TCTTGCAAATGATAGAACTACGTGGCACAATCTAATATAGGATTAGACATACATTTGCTA
GATGGGTTGCTTGTATGAACGCCTGAACCAGTATCGTAGCAAACCGGTAGGAGCAGCAGG
AGAAGATTTGATTGAAGTAAAACCTGAAACGTATCCAGTACTGAACGTATCAGCGGCAGA
TTGCAGGCCGGCGTCTGACAGGGAATTGTTGAACATCTGCACCTGCAGCGTTCCGTCCGT
GGCCTTTGATTAGGTTTTTGATAACAGAATTTGGGAGATTGGAAGACAGAGCTCGTCGGT
GTACTTCTGCTGTTTGTCCAGCATCCACAGATCATGATCGAGGGCGAGGGGAATAGTATA
TGGATTGTCGCCATCTATAGAGAACTTACGATCCTAGCGATCAGACCTCGTGCACTCGTC
ATGGGCTACATGCGCTCCCTGCCTAATCCCTGGGCCATTCCATGTGCCACCTGCTAATGC
TTGGGGCCCCTTAGACTTTGGTCCCGGGGCGGCCGCCCCTCCCGTCCCCCTCCCCTCCTC
AGGACCAGGGCTGGTGGGAGAATCTATAGCCGAACATATTAAATATGATCCTTTAGTCAT
TTGTCGGTGTGTCCGGTCAATGATTGAACATGCCTTTTATTGTCTGTTCGTATTGCTTTT
ATTTTATTTTATTTCTCATATGTATGGTGACTTACACATGATTGATGAATAGTAAAAAAG
AGAAATAAATAAATAAATAAATGGTCCGGATGAGTAGCGTGACTCACCGAGCGTGTCCAG
GCGCGTCCACGAGTCCTCGTATCTTTTCTATATTTGAGATGGATACGAGGATGCACGGGT
CCGATCAATAACTGAATGGGTTAGCGGACGTATGATTGATCGTTTAAGGCGTTGGAGTAG
ATGCTCTAAACACCTTTGGGTCAAAGCCCATATGTTTTGGGCTGGCATAACCCAACTGGC
GACAAGAAAGCTCACGATGTGTACTTTATGTTCCCGCTTTGTAATAAATTTAATGAATTC
TGCAGTAGCATTAGCCGTTCTTTATTAGGTTCCCCTCAAAAGCCTTCTCAAAAATACAAA
AAAATTGGATTTCGGGAAAAACTTTTGTTTGCCAGTACGACTACACGAAAGCATCCAACA
GCACGAGCTGTTTCCTCGTTTGTCAAATCAACAGCGTTTGGAGTGAGATTTCGTTTCGGC
GAATGGAGCCAGCTGTGGCTGTACTGTAAACGGTCCGTTCCAGAGCCGTGGGAGGCAGAG
TTCGTTTTCCTCTCTAGCCCCTGACGGCCCCTCGGGTGGAAGCCTCCTTCATGTCTGAAC
TGTCTTGGCTCCAGCCACGCCAAATGATCGTTCAATGGTCCATACCAGTCTTTGATATCG
TCGGCTTCTGAAAAATTCTACCGTAGGCCGTAGCAGTAGCAGTAGCAGCCAGGCGTGCGA
AGCCACCATCCTCAAAAGGAGACGGAGACCCGGCCGGATCGTGCTCGGCGCCAGCCGCTA
GCGAACGGGTACATGTTGATGTTGGACGCAGACGTCAATGGCGGGGCGAGTGGTAGCGGC
AGATACATCCGCTGTGGTGTGGTGTCGAGAGGCGGACCGACGGCGGTGTCGAGAGGCGGA
CTGTCGCAAAATCCCCTAAATCACGTTTGAAACTCCAAAATCACGGGCCAAACACAACCC
CTCCCCCCTCCATAAGCCGGGCTGGATGACCCGTCACTAATCGGTCGTAAAAATCTGACT
TCAGAATGGGCTCTACCGTCACGGCTGATTGATATCGCGGATATAGAAAGGCCCGAACCA
AACGCGTCTATCACGTCGGAGGACGATGCTAGCCCATCCGACCTCATATATATTTGTCTT
GATCCCCTCCTCCGATCATATCTAAGCCAATATACTTCCCTTCCCTACGCTCGCCTCCGT
CACTCAAGTTCCCGTCCGACGATCTTCAGGCTTGTCCAGCATGTTGGGGCAGCGGATCCG
AGACCTACATTTCAAGATCCGTCGACCATGATCTCACCCCTCGCGAACCCGAGGAGGAGA
TGATTGTGTGACTTATGCTTCGTCGCTTCCGGGAGGAGATCGTGTGACGACAATAGTCAG
ACTTCTTTCGTCGAAAATTCATTCCGTCCGCCCAAATGACGCATGATCCGTCACTAAGGG
TGCCAGCGCTCCCTCATCGAAGGTAGTGTAGTCCGTCAGGCGGTTGCGTTCAAACGCGGT
GGCTGACACGCAACCCCTTCGTTGGAGCGTCGAGCTGGAGACACATCATTGACGTCCTCC
GGCATAAACATGACGTGGTGTGCCCGTCGTGTGAGGCAGCGGGCGCGGGAGGCGACGACA
ACCCTCGCGAAGGTGCACATTGGCAAGGCGGAGTCGCATTCTCCGGTGCCCTGTATGATG
CATTAGTACATGTGTCGCAACCACGTTATGGTGGACGTCGATGGCTCCTTCCAAAACGAA
TCCATCATCGATCTTATGTCCACTGATACCGTTAGGGTTGCAGGCTCCGGTGAGGAAGAA
TCGGGCATGGGAGACAATGGAGACTTTGACTTTGGTGAACGGGCTTGTGTTCCATGTTCT
ACTCAACCTCACTCGTGACCGTACCAACACTCCGGCGAGTGCAGCCGGTCACTGGACATG
AATATAACAGAGTCGGACGAGCTCCATTTACTATTACGTTTACGTTTCATCTAACAGTAT
AGATTTGACGTATTTAATTCATATTGACCGATTGTATAATTAATTTTTTCAGCCTTAAAC
GACAGTATCCATGGAGACGCTGTTCGCAGAAGTTTGGGGAATTTGAGGAATCAGATTTGC
CGTTTACGAGCATTCGAGGGATTGGATTTACCAAACCCGATGGATGCCCTTATGGATGAG
ATGGAAAAGAGAGATACACGAACCGGAACTGTGTGCACGTTCTTGTTATTATTTCGGGGT
GGTATTTACATCCATCCGTGCATTGATACGGCTGCAAACACGCAACAACACAACAAGTTG
GGTCCGTTGAGCACCACGATCCCAAGCGCAACACTCCAAACAGCAAAAGACCACGGAAAT
TCATTCCAAAACCCGCATTTCTAGGCCAGTCACCGGTCACCTCCCCTACCCACCCCGAGC
ACGCGCCCATCACGGTCGCGGCTCGAGACCACCTATCGTCGACCGCGCGCCGTCACTGAC
AACTGGGGCCACCATGCAGGCACCCCCCGCTCGTATCACCTTGGCGCGCCTCGCCTCTTC
CCGCCTCTGCCACAGCCCGCAGCTAACTTACCGGTGGTCGGGCCCAGTGCTCGGTCTCGT
GGCTCTCGTGCTTCTTCTCCTCCTCCGCAGCCGGCTCGCCGGAGAAGGCCCCCGCCGCCG
CGGCTGCCAGCGCCTCCTCTCCCCACGTGGCTGCTCTTCTCCCTGACTTGAACCTTCGCA
TTCCCGCGACGCTCGGCTCCTTCTCCTCCTCCTCGTCGTGCCCGTCCTCCTCCAGCGCCA
TCTTCTTGCCCGCCGCGCCGCCGAATCCCCGGGAGGCGCAGCCGCCGCCGCACCGGAACA
CGGCCGCCACCCCACGCCACCATCTGCGCTGGCGCCGCCGCCCGCACCTCTCCCTGTCGG
ACAGCACCTTCCCAATGCAGGACACCTTGGGCGACCGCGGCTCGTCGCCGGTGCCGGTGC
CAGAGCGCTTGTCGGGCAAGATCCGGCCCTGCGACGGCGGCTGCCCGGGG