| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
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Predicted Genes from contig_39298
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_54678 |
2 |
1064 bp |
None |
Available |
Available |
None |
CDS Structure of MLOC_54678
Contig Sequence (5806 bp)
>contig_39298 5806 assembly3_WGSMorex_rbca.fasta
TTTGAGGTGCTTTCGTACCCTACAAACAATTTCTTCTTATTTTCTCTGATAGATAGGAAC
TTTCGAGTGATTCTTCATCGCACGTTGAGGGATTTTTGTGTGATCCAATTATATTAGCAT
TGTTGAAAGATTGCACTAGTGAAAGTACGAACCTGAGGCCTTATTTTCAAGCATCCATAT
GTGCTAATATAATTATTGGTATATGTTTTATGAATTGCTACCTTGCTGTNNNNNNTTATT
CAGATTATAAAAATATATTTATGGATGGTGATACAAGTGTAATATGAATGGTATAAATAA
AAACAGCAAGGAATCACATCAATCCACATGATAAATAATTACCATAAAAGAATGAAGTAA
ACTGGAAGAAGCTTGGGCTGCAAGGTAGCTAGAGCATTTGACGATATTTAGTATGCATGT
GTACCACTGGTCCTACCAGCTGTCGTCGCCTACCATCGACTACTTCACCTCATGCAAATG
TATCTGAGATCAGACCTAGAAAGACTCTAAAAACTCATTCCGAACATATAACTCTAGCCT
CTAGAAGGCATCTGGAGGAGGAATTGGAAAGAAGGGGACCGGCATCATCCTCATCGTCTA
CAAGGGGACGTCAACATCAATCATCTTCATCAACCATGTTCACCATCACCCATCTCCATC
TCGTTGTAATATTGAACCTTCCGTGGATCAATACGTGTATTAGTCGTTTGTTCCATTATT
CATCTTCACGTTGTTATTCATATGATGTTTGTTGTTTCCATATGCATGTAGAACCCCTTG
TTCTCGGGGATATGGATGAACCCCGTTATGTATATTAGCTGAAATTTTAATAAGGATGTG
AGATTCTCAGTTGAACGTTTTGTTTAATAGCCTTTGTGAATGTTGTGAAGGGGCCCCACT
CAGATTTTCCACCGCAAGGTCGTGAAGCATATCACTCTTGTCGTAAAGGTTAAGATGTAG
AGGTAATTAGAGGTGGCAGTAAAAGGCTCGGTTCCGCGACTTTGCAGTTTATAGGGAATA
ACGGAGAAATATTGGCAATGCCATGTTGACGGGAAAACCCTTCATTATCTTGTGAGAACC
GACATGGGGAAACTACAATAGTGGTGTGCGTGATACAAAGTCTACCACGAGTAGAACGTA
GTATTTTACTTTTGGTCCACACTCTACTCAAAATCATTATATACTTCCGCCCTCATTTTT
CTTTGAGTTTAAAATTAATTTGCAGGTACATTTTGTAAGTCTTCCCATCTTTCGTCTCTC
AGGGTCAGTGTCAACCTATCATAGTGCTTTCCCCATTGATGTTCTTTCTGATCTCAATGC
ATTTCATCGCTCCACCAGAAATTCCCTTTGCCCCTACCGTACCCCAGCTTGGTAGTTTTC
ACCGCCTATCCAACGTTGAGCCTTGGTATTTGATGGCGGACTTGAAAAATCCAGAGACGC
TTTACGCCCAATTATTCTGGATAATGCTTGCATCCTGTGTCTCTTACGCGAATGCTGGCA
TAGAGTGAGTCGATGCTTATTCCTTGGATGTTGTCATTGTTTCTTATCCGAGAAAGAAGT
TGATGGCCCGTAGGCCTTCCACTTCCGAACGGCATTGCTTCGTCGGGCTTTCGCATATTG
CGGAAAATTCCCCCACTTCTGCCTCGCCTCCCGTAGGAGTTTGGGTCGTATAAGGGACAA
AGTCTAATTACTCTGCTTCCCATGGGATCGATAATCTTACTTTGAAAAGCCTACAACTAA
ACCTTTGTGCATTCGCAGGCCTGGGGTTCCCAAATGAACTATGACTACGGCTTTGTTGGC
AATACTTTGAAACCACGTAGTTACCTGAACCAGATTGAAGCTTTTCGCGAGGCATATCGA
AAGATTGAAGACAAGCAGGCATCACATGAGCAGTTTTCAGAAGTATCTCATCGAGCATCA
TGGGAAGCTAGATGAGCACTTTATTTGTTCAAATTCGTGTATTCCTGAAAATTTTGGATT
ATTTGTTGCATTCGGACCCTATTTATTTGTTTAAATTTGACTTTATTGATTTGAAATGTT
GTTGTATTGGTGTCGAAACATGAAAGCTTTGATTCAAGTTGATGCGACATTGGAGTTTAA
ATGGAGTTTAAATGCATATATATAGAATAAACACATAAGGTCAAATTATTAAGGTCCTCA
AATATAGTCCTATCTACTAAGAGCAACTCTGGCAGCATATTCTCCAAGCTTCTCGACCTA
CTAGGACTGGTATGAGTTCGTTTATGTTCTTCAAACATGAACAAACTACTACTCTTTTCC
CAATGTAATTAACCTTGGGTACCCTCTACCGTAGCAACTTAACTTGTTGGAAATATAAGA
GTAAATGGATTGATTCTTCTTCTCCATGCATCAATTGACAATACTATCAAGATTCGTGAC
CCTTTGCCAAAGTAAGACATGTCGGCAAACAAGGAGGGAGACAAACCATGTGCAATACAG
GCACAGAAGTGGGTCCCAGATGTTCAAAAACTCTCCTCATTGATTGGCGGATCGGATGCT
GCATGCCCGAATACATCCATCTGTGACACCAAAAAGGAAGAGAAAAGGATAACATGCCCT
CAATGATCAAAGATCCATCCTAACGCTGTGGCGGCAATCCATCAAATCACTCCAAGCTAG
CTAGCACCTTACAGCTTAATTAATTAGGTACCATGCCAGTGCCGGGGATTCATTTCGGGC
TCAACAAAAACAAAACGGAGAAGAGTCTCAGGACTCGTCGTCGACGGTCTTCAGATTGAG
CACCGGAGACTCTGAATGCAGTGGGTGTAGCAGTAGTATGTACTGGATCGATGATGGAAC
TCCTCGACCCATCGATCGATCGTCTGTGATGGTGGACGCAGCGCGAGGTCACGAGGCGGC
GGTGTCGACGACCTTGGCTTTGTTGTCGAGCATGGACCACATGACCTGCACGTCCTCGTA
GGCGCACGCCATCACGTCGCCGTAGAGCTGCGCCGTCGTCGACGGGCTCTCCACCACCTC
GCCTTGCGCCATGGCCGCCGCCCCCGCCGCTCCGGACCGCTTGAGGTGGTGGCGCGTGCG
CGGCGTCTTCTTGCCGTCGTTGACGCTGCCGCCGTGCTGGTCGTCGCTCCTGCTGCCGCC
GTTCTGCGGGCTGAGGATGGTGCAGGCCTTCCTGAACGGCGACGTGATGGTGCGCTTCCA
AGAACCCATACTCTATATGACTCTCTAGTATATCTAGCTAGCTAGCTGGTAGTGGTATCT
ACGACGTATCAAAGCAATGGAAGCTTCTGTGTGTGCGCGTGTGTATGCAACTGTGCTGTA
GAGCGAGAACCGGCTGCTCTGCCCGGGCCTGGGGGCCGATATATATCCATGGGGATGGGG
AGAGGAGGGAAAGGAGGGGAGGGGAAGGTGGGGGAGACAAGATCCGGAAGACAGGATGGG
TAGGGGTGCACGTTGCGGGCGAGAGCGCCCAAGGGGCGGTAGGGACTTCCGCTGGACGTC
TCTCATCCGCAGCCGTCAGATCGTCGATCGGACGGCGCGCAAGCCCCGGTAGGTCACCGC
GCAGGGCAGGGTACGCGCCACAAGAGGATTGTTTATCGTTTCCCGTTGGTGATGAGGGAA
GGTGGGTGAGTGAGTGAGAACAGAATCATAGGCGGGCACGTGCTCCGTGGTGGGGTGGCT
CCGTCCGCGAATGATGAGAAGCAAGCGCACATGGATCCGTGGATGGGGATCGTGGCCGAT
GAGTGGACGACGACGACGGGCAGCGTACAGCGGCATGCGCGCCGCCCCCAACCGTTGGGG
TCCGGCCATCGCGTTCGTACGACGGCGTACGTACGCGAGGAGGGGCGGGCGGGCGGGCTC
GTGGTCACCATGTGGCAGGTCGGGTCGGATTCGGCGCTACGCTGCCGCCCCCAGCATGCA
GCCCGGCCCGCACCTCGTGATCGACATTCATCGTGGCCGGGCATGCATGCATGTCACTGT
GCGATCGAGTTCGCGGTGATGCAACGGCCATGGCTACTGTTCATCGTGGAGGTTTGGTTC
CATGTTCCTTTCCTTGGCGTCGTCCGTCAACGCTGGCAATAAAACCGGCGCGTGTTTGCC
TGCCGGTGCCGGATCTGGATGCGTGAACGGTATGCGCTCCTAGCTACTAGCTGCAAGTAC
ACTTCACGCGGCCGGCGGGTGTATATTAAAGTTTTCGGCGCGCGCGCACCGCGAGGGGTT
TGAATACCGGCCTCCGTGACGACCGGCCACTGACGGTTTTTCAGTGTCCGGTATCAATCA
ACTACTCGTACTTAGCAATGACAGCGCCTAATGTTAACTAAAAGGGTGCCTGATCTTGCA
CGCTAACAGAGGAAAAAAAGATCTAGAGTTTGACTACGGAAGATATGGAGTGTTTACTCT
GTAATAGTATATGCACTACGTGGAGCTTTACAAAAAAAGAAATACGTGGTGCAGAGTTCC
AAAGAAACGGTGTATATACCTGCACCGATTTCACAAAAAAATAAATTTGTCTGCGTATTT
AACATTTAAGGGAGCTAAGAAAAAAAAAATTAAGAAAGATGGTAGCTTAAAGTAAAACCA
AACAGCCACGCGATGGCCGGTTAAGTATTGTTGCTTAAGTATTGGCTTTGAGCATTGACA
TCTACTAGTGTTACTTTTTTTAGGGGAACGACGTCTAGTGTTACTAGTGAATGTATATTG
CACGTGACGTAGGGCGGTCGCGTTGTCAGCTCGATCCGGTGATGAAATACGTACACACCT
TCACACAATTAATTAAACGGAAACTTTCAAACTGGAAAGTAGTCCCCTCAATAAGGCCCT
GTTTGTTTCAAAAGTCTCGAAACTTTTTTAGTCCCAAACTTAAAAGTCTCTATTCTCTAC
CCGTTTGTTTTCAGAGACTAAATAAAGACTAGAGGTCATTAAATGACATGCAAAAAGACC
ACATTACCTTATTTAGTAGTTATTAAATGACATGCTAAAAGTAGGGGCATTATTGGAAAA
AGTGTGAAAAAAGTTCAAAAAGACCCTTTCATAGGGACTTCTCCAAATAGTCCCAAATAC
CTCCTTTTAGGCCCTAAAAGTCCCTCCTGTTTGTTTTACATGGGACTTTTTGAAACTTTT
TTTAGTCCCCACACCAAAAAGTCCAGGGAAACAAACACCCGCTAAGAACTGGAAAGAAGA
GAAAGGTCAACTAGTGTTGGTTTCGTTATTATCTTGATGATAGAGCAGTGGGTGTCGGCC
AGGGCTTTGCCTTCTTGATAGACAAAGAAAAGTCAACTAGTTAGCCACGCTGAAAAACCA
ATTTGGTCAAATGCATGCATGTACAAAGTCTGACGGTGTGAAATATCTTGCATGCATTTA
TTTCACGGAGCACAACAGTTGATCCAACGTCACAGCCGATCCAACACATCAGAAGAATGA
GTTCTTTTCTTCATTTGGCGCAAGGAGAACGAGTTGCGTGCGGAAGTACAATTTTGAAAA
GAATTTATCCATTGACACAACATCAATCTATGTTGTCCTAAAATTTTAAATCAAAATTTG
GAACATAGGTCCGGATTTGTTTGTACAAATTTGACACTGGCTAGTGTATACTACAAATGA
GCATTAGACTTGGCACATTATCTGTATTGATAACAATTTTTTTGGTTTTGTATCTCGAGT
ACTCCCTCCGTTTCAGTGTATAAGTCATTTTACGAAAACGAAATAATTCCAAAACACTTA
GGCACGGTGCATTAACTTTCATCTTTTTTTTTATTTTTTGACATGAATAAAGGAATCAAC
CAATAAAAGACGTGGGGTGTGTATGTTTTTAATGATTTGAGACTAA
