| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
 |
No map location |  |
Predicted Genes from contig_39182
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_54510 |
2 |
2383 bp |
MLOC_54510.1 |
Available |
Available |
LOC_Os01g59360.1, FRAME:-2, EVALUE:0.0, 13101.m06307 protein CAMK_CAMK_like.10 - CAMK includes calcium/calmodulin depedent protein kinases, expressed |
CDS Structure of MLOC_54510
Contig Sequence (7647 bp)
>contig_39182 7647 assembly3_WGSMorex_rbca.fasta
AAGGATTTCTGGTGCCGTCGACACGACTNNNNNNNNNNNNNNNNNCAGGGAAGCACAACT
GACATCAATAGGCAGAGGATAAGATTCAAACAAACAAAAAATAGAGACAGAGGATAAGGT
TCACACTTAGAAAAAGACTGCACAAAGGTTATGAAATTTGTTTCCATCCAATGACCTAGA
CGCGTCCAGCATAGCATTCGACCGACGCGCCGTACGTAAACGTTTACCTTATCTCTTTGT
CGTTAGGCCATTTGGGCCCGACGAGGGCAACGTTCTTGAGCTCCAGCGTCGAAAAGTGCG
TCTGGAGCGTGGCTCACGCTTGTCGAGCACCTTCTTGGCATGTTGAGATCTTCCAAGTTT
GGATCTGCGAGCGAGCTTCTGGGCAGTGGCGGAGCCAGTATTTAGATATAGCCGCTGATC
ATAGGGGGGGGGGGCAAATACATACACACTCGACTTCTTCAACTCAGCTACAAACTCATC
GGGTAACTATTGAGTTTTCTTTACTGACTCCTGAGAAACAAATATTTAATTTGTAAGTTG
AGCATGTTGATCCTTAGGTTGGACGCCCGAGCTAAGGCTCGCGGGCTACTAGGTTCCGCA
TTTATGTACTATATGAAATACTACCTCTATCAAGGTTTAGAATGCACAGTTAAATTTACG
TGCATTTTCATAATAGAGAAGGTTTAAGGCGCATTGCATTTACTCCTAACAGGTAATTAG
TACTTCATTATACTACTTTTATATGCATACGTAGTGTGTGAATGTTATTTTTTAGCCCAT
CTCACAGCCAATCAATAACCATCTAGGTTTTAGAAAATTTGTAAGCATGTATTCTAAGCC
ATGACAAATGGAGTAATCGTTTATCGATCCTCATGACGAGTGCGGGCACTCGACAAGGGT
CTCAAGGCTATTGCACTTTACGATTAATTAAGGGATTGTTCCATTCCGAGCCATACTTTG
CCACACTTTCACACTTTGTCACATCTTATCTTAAACAACTTTGATCAAGTTAGATCTATG
TTTGATTTTAGCCACATCTAAGACGGAAAAAAAATTAGTTTTGCTAAGTCTCAATCGACT
AAGACTTCGTTATGTCTCAATCGATGATATATGATTTTGATCTTGCATCACGATCTGTAC
AATCTTGTTTCTTTTCAAATTTTCCATTTCATTCTTATATACTATGTCACTTGACTGAGA
CTTAGTTAAATCTCGATCGACTGACACCTAGCCACACTTTTTTTATGAGTAGTAAACTCA
CGTGTAATAGACATAAAAATGTGACAAGATTCCCTTAAGCAAGTCAAAATATGGCTAACA
ATTTAAACAACTCAAGTAAGGCCAGTGTAACGAATGCGGTAAAAATAATAGATAGTCACA
ATCCAAACAACCTCTAAAATTTGATCACACAACCTCTAAATAATATGACAATATATGATA
AAGATAGTCACGATCCAAACAGCCTCTAAATTTTGATCAGACATTCTCTCCGGGGTCTCC
ACCACTGGATATCACCTCGAATGATAAATTAACTTTCACCGGCAAAAAAAAGGAATGGCA
AATTAACTTTTCTGAAAAGATCGTACGCTACGTCGGGCTTCCCCAGCGTTACCTCAAAAC
AAACCTGGAATGCTACTAAGCACTGGAGGGATTTGTGATTTTTGTTAAATTAAATAGAGT
GAATTTCGGTTTTCATCCTATATTATCTCTTGATATAATATTGAACATATCATATCAAGG
CCACCGTGCGGCGTGTGCAGAGCTGGAGCATGAAGAAGATTGGGGATGTATCCCGCCAAC
TTCTCATCGCTCGCGAGCTGATCGCACACTTAGATGTAGCTCAAGATTCCCGCCTGCTCA
CCCCGACTGAGGCCTGGCTTCGACGACGGTTGAAAGGGGCCTACCTGGGCCTCGCCTCGC
TGCAGCGGTCCATCTCACACCCTGCTGGCCTTGCTGAGGCGGCCTATCGGCACTTTTCTA
ACATCCTTGGACTGTTGTGTCGCGCACCTTCACTCTGGACCTCCCCGCGGTCCACACCGT
CCCTTTCAAGCTTTTCGGCCTAGACACGCCGTTCTCGGAGGACGATATCCGACATGTAAT
CAAGAGCCTGCCGCTTGGAAAGGCACCGGGCACCGACGGCTTTCTCACGGAGTTTCTTCG
CAGTGCACGGGATGTGATCAAGATTGACATTTGCACCGTCTTCGACAAGCTATACTCGCT
CAACGGTCGCGGCTTCTAGCGGCTCAACGAGGCGTTCATCACACTTCTCCCTAATAATCA
AGACGCGGCATCCCTCTTCGACTACCGTCCCATCAGTCTCATCCACCTCGCCGCGAAGCT
TTTCGTGAAGGTACTCTCCCTCCAGTTGGCACCGCACTTGGGCACCATGGTTTCGACGAA
CCAAAGTGCGTTTATTGTCGGTCATAGCATCCACGACAACTTCCTTCTGGTACAACAAAC
GGCGCGACTTCTTCACAACCTCAAGGCACCACGGATGCTACTCAAGCTCGACATTGTGAG
GGCATTCAACTCGGTGTCGTGGCCTTTCCTCCTTGATACATTGCGGCACCTGGGCTTCGG
GGATCGCTGGCGCGAGTGGATCTCCATCTTGCTCTCCAAAGCGTCCATGAGGGTCCTCGT
CAACGGCGTCCCCCGCCCACCGAAAAGGGCTCAACTCCATCATCGCATGATCCACATCCC
TCGTCGCCCTCCGAAAAGGGCTCAACTCCATCATCGCACTCACTGCATGGGTGATCTGGA
AGCATAGGAACGGATGTATCTTCGATCACCTTCAGCCATCCACCACGAGACTATTGAAGT
GCATCCAAGAAGAGGCGTGCCTATGGGCTAGCGCCGGTGCCAACGGCTTGGCAATCATGA
TTTATGCGAGATTGAACTCTTTTGATGTATTGGGGACGAGCAACCCTTACCTCTCACTGC
TCCGGTTCTTTGGGCCCACGTCGGCTTGTGTACGTGTGTCTCTTGTAACCTAACCGAAAA
CTGTACCTTTTCACCTATTCTATCAATGTAATGATACGCAATTTTTGTGTATTCGCGAAA
AAATTAGACGGTAGTTGACTGAAAAATAACAAAGTCTCGACGGACCGGCATACATAACGT
CCTTCTCCCCGTTTGATCTGGCCCAATTTGCCCATGTATGTGATTTGACTTGACCTCGCC
GAAGTTGCCTAGCGATTTTGCGCCATGTTATGTTTTTTTGGGGCATCGCTGCTCTTTGGG
GCACTCGCCACTTAGCTTTTTCTAACGTGCGGTTTTCTAGTGCTTTTTTTGTTTTTTTCT
CTTTTTAAAAGTGTTTTGTTCATATTCCTTTTACGTTCCTCAAAAAAAAAAACGTAAGCA
TTTCGTAATATTAGTTTTCATATACTTTAGAAAGGAAGTTTATGGTTTTAATCCTTTATT
TTGTCATTTTTGACACTAATTATCCTATTTAACGGGATTTCATTCGTTTTACCACATTTA
ATAAAAGTGTTGTCACAATTTATCCAATTTATTAAAAAATTGTGAGCGTTCTCCTCGATG
GATCTCAATTGTAAGGTCCTTCAGTTCTAAAAAGTACTATTTTGAATACCTTTTACACGC
ATACTTCATGGCTGATCGGCCAGCAGAAGAGCAAAGCAGACAGAGGTATGCAGTGACGAG
TAGAACTCGTTCAGGCCATTGATTTTGATTCTGCTTTTATATTCTACTCCCTTCGTCTTA
AAATTCTTGTTTTAGATTTGTCTAAAAATAATGTATTAAGATATTAAAACATGACTATAT
ACATTTATATCTAGACAAATTTAAGACAATAATTTTAAGACGGAGGGAATACATGTGAGT
AAACTGCCTGCTTGTACAGTTGTACTGGGTAAGGATCCTCTGCGGTACTGTATGGTACAG
TAAAGTCACTATCATGTGGGACTTGGTCCCATATGTCATCCGCGGTACAGCAGAGGATCT
CAACCCTACTAGACTTCATACCGTTCCACAAGCCGTAGGAAGCACGCGAGAGACTCATCA
AAAACACACTCGTTAGTTCACTCAAGTTACATACCTGTACATTTTCAAGCCTGAAACCGC
GCACAAGTTCAGGCTCTAAAATGTCCAACTTACTCAACTGATGTATACATACATACTAAC
TAATTCCCCTGGCAGTCAAGGGAACCAGCAGAACCAGAGAAGAAGAAGATGACAGCGTAC
GTTCCATTCCCGGAACATTTTCGGTTCCCACGGTATATATATGAACATTTTCTACTCGGC
CCCTTGTGAGAAAAATGTGCATGAGCTCGTCTTCGTCGTCGTCGTCGTTGTCGCGGGCGG
CCTCGCACGCGCGCTCGATCGCTTGCTGCTCTTCTGTTGCCGATCGACCGCCTGCTTCCT
CGACCAACCCGCCGTCTCCTATAGCACGACGTCGCGCCGCTTCTTGGGGTTGGCCCCCTC
GGGGGCCCCTTTCCTCATCATCGCCACGAACTCGCTGTAGTCGATCCTCCCGTCCTGCAC
AACCACGACGAGTTTTCAGACCACCATTTGGCCGACGAACGCATCCGTCAACCATCAACA
AAGAAGACACTCGTTACGTTGTCGGCGTCGACTTCCGATACGATTTCCTTGATGTCTCTG
CCGTCCTCCAGGAGTCCCTTCTCCCGAAGGGCCTGCTCGAGCTCCTCCTTGGAAATGTAG
CTGCGGCAGCCATGGCAAGGCCAAGAATGAGTTCGCTAGTAATGTCTGTGGATCAGGAGA
GAATGTGAACTTGTCACTCAGGTCACGTACCCGCTGTTGTCCTTGTCGAAGTACTGGAAG
GCCGTGTAGAGGTGCTCTTCCCGGTCCATCCTGTTCATGTGCATCGTCGCCGTGATGAAC
TCCTCGTAGTCGATCGTCCCGCTCCCGTCGGCGTCGGCCTGGACCAGGAAAGCTCAAGAC
GCGCCGCTAGCTCCATGGACCTGGAAATGTATACAGAGAGAGAGAGAGAGAGAGACTTAC
GGCTTCCATGAGCTGCTCCACTTCGGCCTCCGTGAGCTTGGTCCCCTGCTTTCCCAGACC
CTTCCGGAGCTCGTCGACGGTGATGGTGCCGCTGTTGTCCGAGTCCATGCTCTTGAACAT
CTCCTTGAGCCCCCTGATCTCTTCCTCCGACAGGCATCCGGCGATGACCTGCATGCCATG
CAGAAATGGGTCCGTTCAGAACATAAAAATGGAGGTTTCTGAATAATAATTCAGAACCAC
GCGGACGGACCCTTAGCGCAGCTTTCTTGAACTGGTTCATAGCCTTGAACTGCTTGAGCC
TGTTCATGACGGCGTTGTCCAGCGGCGTGTCAGGCGCCTCTCCGTCTTCCTTGATCCAAG
CATGGTCTGAACACCAAAACAATAGCATAGCATTTGATCAGAATTCAGGGCTCGTAAACA
AAACCGCTCGCAAATACACAAGATGGGCACGCACTGAGGACGTCGTAGGCTGATATCCTC
TTCTTGGGGTCAGAGTTGAGCATCTTTCTGACGAGGTCCTTGGCGGCGGGCGAAATGCGT
GGCCACGGGTCGCTGGTGAAGTCTACCTGCCCCCGCAGGATGGAATTGAAGATGCCGTGC
TCCGATTCTGGTACGACAAAATTCCAAGTCTCACCACCTTAATTGGTGCGTTTCGTTTAG
ACTGTTGTTAATTACTCCTAGATTGGAAGATGACTCGCCTGCCCAGAAGGGAGGGACACC
GCAGAGAAGGATGTAGAGGATGACGCCGACGCTCCAGATGTCCGCCTCCGGCCCGTAGTT
CCGCTTCAGGACCTCCGGCGCGATGTAGTAGGCGCTGCCGACGATGTCCTTGAACACCTC
CCCTGCGACCAACGATGGCGCCAGGATTCTTTTTTTTTTCATTTGCTATTTTGCTTGGAC
AGGAAAGGAAAGAAGAAGAAAAATGCATGCGCGCGTGCGTGCCTTGCTTGAAGAAGACGG
AGAGGCCGAAGTCGGTGGCCTTGAGCGGCGCGTCCTCCTCCTTGCTGAGCAGGAGGAAGT
TCTCGGGCTTGAGGTCGCGGTGGATGACGCCGAGGGAGTGGCAGGTGTGGATGATCTCGA
CGATGGTTCGGAGCAGGGATGCGGCGGCGCGCTCCGTGTACTTGCCCTTGGTGATGATCC
GGTCGAAGAGCTCCCCGCCGGCGCAGAGCTCCATGACGAGGTGCACGGACTGCTTGTCCT
CGTAGGCGCCCTTGAGCTCGACGATGTTGGGCTGGCCGGCGAGGTGGTACATGATCTGCA
CCTCGCGCCGCACGTCCTCCACGTCCTCCTTGGTGGACAGCTTGCGCTTGGCGATGGTCT
TGCAGGCGAACTTCTGGCCCGTGGCCTTGTGCGTGCAGAGGCTGGTGACCCCGAACTGGC
CGCGGCCGAGCTCCTTGCCGACGGTGTAGATGCTGCGTACGTCCTCCATGGGGCGGCCGA
GCACGGGGCCGATGGCGGCCGGCGGCTTGTTCTGCGCGGGCGCGGAGGAGGGCGATGCGC
CGCCGGCCTTGATGGAGGCGCCGGCGCGGCGCGTGGAGGGGTCGCCGGAGGAGGCGGGGA
CGGGCTCCGCATCCCCTGATCCCGCGCAGCAGTTTCCCATGGCGAGCCGGCGGGTGGGCG
CGGCACGCGGGGGAGCGCTAGCGGCGCCGGGGAGGTCAAGAATGTGGGGGATGCGGAGCC
TTAGGGGAGGTAGGCGGCGACGCAGCCGTGGAGGTTGTATAGGGAGCGGTGGGCCGGGAG
CAAATACCGGGAAACGCAACGGCCTCCCCTCCCGCTCCCCTCCTTTGTGTAGCTTGCCCG
TTTTGGAACCGGAAGGCCTTCCCTTGCTCCTATCTTTTTCTTCTTCTCTTCATTCTTCCT
TGACCTTCCTTGAGACTTGAGAGGAGACTCCCGTACGTCCTGGTGCTCCTGCGCGGGCTG
GGGTTGACGAAAACTAGAAGAATGCAGAGGGGCCTTTCCAAATGCAACTGATCCGTGCGC
TCTTTCTAGCTAATTAGCTGTTCTGCACTAGCTACCGCCCAACACCAAACCTGAAATCGA
TCATGAAGATCGTCCGTCGAGCACGCATGCGTCCAACGTTTGCCCTGCATGCATGATCCC
CCTCCCACGCCATCACTTCCGCTGATACGCTTCCGTCGTTGCGCCCCACTAGCTAGTTGC
ACACGATCACACCATCTCCAACCCTTTCGGTTAGGGGGATATATAGGAAAGGCAAACGGA
CCCAAAAGTAATAGGCATTTCATCCGTGGAATTTCCACTAGAAACAAATCAGATGGCGTG
AAATCCAGCCAAAATGTGCTAAAACCATTTATTTATTTTTCTTTTTTAGTTGCCAAAACC
ACTGTTATGTGCAGTGCGAGCAGTAACACGCAAGTAGCCCTTTCACGAAATCTGAATGTC
TTCCAAAAAATACTGTTTTTTGTTGTTGTTGAGGATATGGTGTGATTGATTTATTTATTT
ACGTGCGCGTCTAGACCGCAGTTGACTTCGCCACGTGTCGCTCATGCTAGCTGAAGTTGA
TTCTTTAGATGGACTAGCAAAATGGCCCGTGTGTTGCAACGGGATAAAAAAACATAATCT
TCAATGATGATGATCATATTATGTTCACACATCATCGCTTGATTTTAAAATTTTATGCAT
AAATGCAAGAAAATGTTTCTTCTTTTA
