Contig Data
morexGenes
Links



Map Locations of contig_39139 (4845 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map location




Predicted Genes from contig_39139

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_54441 2 1489 bp AK366997 Available Available None





CDS Structure of MLOC_54441






Contig Sequence (4845 bp)

>contig_39139 4845 assembly3_WGSMorex_rbca.fasta
GGGGGGGGGGGGGGGGGGAGCTCGGCTGCACCTCCAAATCCCAAGGGGCACCGGAGGTAG
AGCAGACCGGCGAGATGATGGAACTCCTCATCTGTCGTGATTCATCTATTGAGGAAGAGA
TACGTACATTCCCAGTACAATTTCAGGTTTCTTTAATCGTCTTGTGTGTTAGATACTGCT
GAAATTCAAAAACAGAATAATTGGTTCACAAGCAGATATTGTGATGCGATTCCTGCAGAA
AATGTAGTAAGAGAATCATTTGATACCTCATTACATTTTGTACGCATGCCATTATTAGCA
ATATGTAATGCACATCCACAGTAAAAAAAAGAGTGTTATATAATGCAGATACCTGTACAC
ATACCACTAGCTACTCGTAGTATATTCTAGCTCGCACGTACGGAGTGCATCCGCAACGGC
CAGTTAGCTACGGAGCTCTAACGATTGATCAACCGGCAGAATCATTTGATGGCCAGCAGC
GACGGCATTGATCATCAGCGGGGACACACTTGACAGTCCGACGGACCATGAGCCATGTGA
TGTGTCTAGCTATGAGGCCGATCGCATATGTGCAGGTGCAGCACACAATGATTTGACGGT
TAGTCTTGGTCTTAGCTAGTCACCTCATCATATGGACGATGATGAGATCTCGCTCGCCAT
TTCTGAGCTGGTTTTTAGATATACAGATCTCGGATCGATCGGATGGACGGCGATGATCAC
GCGCACGCGTACTCTCCTGCCCGTCCACCTTTACTTGTTTGTTGCATGCATGATTTGCAC
CACATGCCACTGTCGGGAAATTATATATATTTCGGGTCGACTACTGGTCCAAGAACCCAA
CCACCCACACACGTATACTTGATCGATATAGTTTGATGGAAACACCGCAAGTTTTCCCTC
ACCTAAGACTAGTTTGTTTTTCCAGAGAAAACTTTCGGTCTTTCCTGGAAAAATTTCGGT
CTTATCATCAAACACCATGACGGTACAGAAAACATGAGAGTAACAAAAATTACACTCAAC
TATGTACACTGTATAATGACGATTACAAGTATTGCAGCCGGACAAAGGCACGTCATCGGC
GTCGTCCCTCCCTCTCTCACCGTGCAGCCAAATAACCCAAATGGGTTATTTCATTGTGTG
TTATGCATTATTAATGACGAAGAAGTTACACTGTATATATGAGTTTTTTTCTCACAAAAA
CGAGAACACATGTTGACAACGAGCACTTGTTTGTCTTGTCATGCCGCACGTGCATTGTGT
TTTCTAAATACTCAAAATCGATTAGAGGGTTATGCCACCTCATCCAAAATCACACCTACC
ATTACTTTATTCCATATTTAGTTAATTCAGAATTTGATTATTATCTCAGCAACCAAAATA
CATGCCAAATAAGTTTTCTTTATTTCAATAAATTAATATATTTTCGGATAAATTGATAAA
AAGAATATTTTATAGAACAACGATGAGCGAATAATATTTTACATCATTGGAAAATGGAAA
TCTATTTAAATACTTTTTGAAAGAAAGATTTAGCAAAATCAAAAACTAAAATATTGAAAG
CAAATAATTAGAAAACGAAAAAAATAATTGATATCTTTTCAAAAAAAATATTGAAAAATT
AAATTTAGCAAAATAAAAATATAGAAGATGAAGGACTGTGTTTATGGCGCATCACATAAC
GGTCCAGATTTACCAACTTCTTCTACAGCCCAGGTTTTTGTATGTTTTCCACAGAGAAGA
TCGACTAGTTAGGTCCTCTTGACTGAACTAATTGGAATATCGGTTAGAAAAACCAATTAC
AAGAAGTAATTTCTTTAAAGCAAACATGAACATTATCTTCCGTAAAATAACATTATATTA
TTTTCTCAGAAAAAATAAATATACTTAAACACCACTTAATTAAACATTTACTAAAAAACT
GAAAATAGTAACAAATGTAAAATGATGAGAATATTTGAGAAACGTTATTGAATAATATGA
GGCTTTAAGGATAAAATTTATATAGGATGAACTCTTGCCTTTGTGGTTGATAGTGTTAAG
GGGCTAGATTTAACTGTTTCTTCTACGACCAAGTTTCTAGCTTTTTCATTAAGTAAGATT
GATTTGAAAAAAAAATCAACACAACTAATCAGAATAAAAGTTTGAAAAAGTACTAGTGTT
TCTGGTTTGTTACTTCAGGGGCTAGATTTAACAACTTCTTCAAAAAGTGTTTTTTAAGCA
GGATTATCTTATAGAGAATGTTTAAAAATAAAAAGTTTGCATAGACAGATAAAATGTTAA
TTGTTTAAAGAAATACAAATGAATGTTAGCTTTATGAATTTCTATCTGAACACCTTTAAA
ATTAAATACTTACTTGGAAAAAATGATTATTGATTGTTTTGGTACATATGTAAAAAAAAA
TAAAAAATCTTAGAAATGTAATGAAAAATATGATACTTCTAAGGGTATAAAGTTTAGAAG
GCGAACACTTGTGGTATTTTTTATTTAAACTTCATTTAAACACTTGCTTGTGTTCTTTGA
GATTTAGCTGTGTTCTTCTATGACCGAGTTTCTGATTTAACATTTAAACATTTTTGGAAT
CTGAACAGTGAGGAGATACACGATTGTGTTTGTGGTTGCTCGGGCAAGATTTGATTTCGC
CTTCAACATTTATCACCCTACAAACAAAAGGTGTTCAGGATCAGACATGATCAGTTCCGT
TGCGTAAGAGGAACCAAAGCGTGCAAAAAGGCCTACTCCCCGGCTGGACCCCTCCCATTA
AAAGCAATGTTTTAAATAACGAGCTATGGCAAATAGCGGCAGGTCTGGAAATCAACTATA
ACGGAGCTATATTGGGCTATAGCGGCATATTCGTACGTGATACCATTTAGCGGCACCCTA
CTGAAAAGAAATAGCCGGCTATTTAAAACTATAATTAAAAGGCTTTAACCCATGTTACCA
TCTCTGCTAATCTCCTGACGGAGCCTCTGCAGGGAGGCTTAATCACACCCAAGATCACTA
GGAACGGTAATGCTGCAATCATGCGATGCAACAGCTTGCATGTTGATTAAATTACTGTGA
ATCCCCACTTGTACGCACATTGATTGTACGATCATGCCTGAGCTTAATTATTCTACACGA
ACCGGGGCGATTTCCCTTGCTCACATGACCCTAACGTAATGCAATCTCACCTGGGAACCT
GGAGCAGCCAGCGATTTGGGCAGTTGATTACTCCGGCAGTGCATCCCCAGTGCCTTGTCA
AGGGTCAAGGGCCGCCATGGAAACTCGCCACAGGATCCCCAAAGGAGATCCACCCCACGC
GCACCAGCTCATCATTGTCGCCCCTCCCATCATCCCCGGTTAACCATCGCTCCGATCCCC
CTAGCTATTTATACCCGCGCACCTGCGCATCATTTGCTCATCACCACCGCCGGCGACCAC
CCTCCTTCCTCTCCACCATCCTAGCTCCTACACACGGACACACAGAGCTCAGATAGTTAG
TTAGTTAGAGGATAATGGCGCCTCAGAGCCTTGATCTTGGCCTGAGCCTTGGCCTGGGCC
TCGTGTCTCGGTCATCACAGCCGAGCTTCTGGTACTCCGGCGGCAATGCGCCGGTGGAAC
CGGAAGTGGGTCCTACTCCGACCGCGGTGGCGGCGGTGGAGGAGAGGAGGTGTTCGCCTG
GCAGCCCGGCGTCGAGCGGCAGCGGCAGCGGGCTGAAGCGCGGCGCCGAGAGGTCCGCCG
GCAGCGGCGACGAGGACCAGGACGACGACGGCGGCAACGCGCGCAAGAAGCTCCGGCTGT
CCAAGGACCAGGCCGCCGTCCTCGAGGAGTGCTTCAAGACGCACCACACCCTCACTCCGG
TACGTGTCTCTCGCCTCGTTACACTTGGCACGGTCGACCGTCATGGAGATCGATGACGGA
CAAGGAAATGACATGGATTTCCTCGCGTTTGCAGAAGCAGAAGCTAGCGCTGGCAAACAG
CCTCGGGCTGCGGCCGCGGCAGGTGGAGGTGTGGTTCCAGAACCGCCGGGCACGCACCAA
GCTGAAGCAGACGGAGGTGGACTGCGAGTACATGAAGCGCTGGTGCGAGCAGCTCGCCGA
GCAGAACCGCCGCCTAGAGAAGGAGGTGGCCGAGCTCCGCGCGCTCAAGGCCGCACCGCC
GGCGCACAGCGCGGCGGCAGCGGCGGGGCCACTGACCACGCTCACCATGTGCCTCTCCTG
CAAGCGCGTCGCGTCCACGTCCTCCGCCTCGGCCTGCACCGTGCCCAGCTTTTCCGCCAA
TGCCGCCGGCTCCGGCATGCCAATGCCATCCCCGGTGGCGGTGCCAGACCACCGGCAGTT
CTTCTGGGGGTTCCGGGACACCGGAGCGGCGTACGGCGGCCCCGCCGGGCTAGTGAAGGC
GGTCAAGGCGGCCAGATAGCAAGAGCAATCCCTGTGATGCCGCCATGATCAGCATGCCAA
GCAAAGCTAACAGAAATGGCGGCATTATCACAACTCACAAGTCTAAGCAAGTTTAGCCGA
GAGTTTCATCCTTTTTTTCCTGCATCCCTGAGGGAAATGCAAGTTAGTTAGTTATAGGAT
CGCTCGATCAATGAGTTCCCACATATGGATTATAGTAATGTACGCACGTGAAAAGTTGAT
GGAATAACATGAGAAACTAATTCATACCAACTTAATTTTCTCCCGTCATGCGTAAACCGA
TATAACAGTGACCCCACACACAGAAAACCGGATTTTTTTTCTATGTTTTAACTTTTTTTC
TAAACATGAGCACAAAATGAACCAGATCTGAAACCATTTCACGATCTGACCCTTTTAGAA
ACGCTACAAGCCGTGGTGTTGCTGCCCCACTATGCAACGCCTGTC