Contig Data
morexGenes
Links



Map Locations of contig_39125 (6093 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_39125

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_54419 3 3119 bp MLOC_54419.3 Available Available LOC_Os07g26690.1, FRAME:-3, EVALUE:0.0, 13107.m02646 protein aquaporin protein, putative, expressed





CDS Structure of MLOC_54419






Contig Sequence (6093 bp)

>contig_39125 6093 assembly3_WGSMorex_rbca.fasta
CTATAGCTGCCAAAACTGCTGACACGAGCCATAGCTGTGGATACCTAACCCTGACGAATT
AGGACATGAGCATTAAATGCACCATGAGGTGTCACACTGGCGGCGTCTCCCGACAAGGAT
CGTCTCTCCTTCTGTTTCGCTCGTCCAGCTACCTCTTATTCTCTTGACACGTCGCGGGAC
GCGTGTTATTAAAGCTGCTGCATGTCCCTCACTGTCGCGAGAGGCCTCTGACCAGACTCA
CCTAACTGCCTGCCCGCTCGACACCTCACTGATGTTGACAATCAGCCTTATGAGGTGGAG
CAGTGGAGATATGAAGAAGTCTTGTCGGACGTGATGGTTGATGGGTCTTCTCCCTCCCGG
CAAGGTGGCTTGCCGGGGGCCTTGTCTTGTAGTTTCTTGGTTTGAGCTTTCCTTCAGCAG
GGTGTTGCCGGATGAGGAGGTTGTTGTCGTCTGTGCACCAGCGAGGGTACTAAGGGACCC
GTGAGGGAGTCCGGGACAAGGGGTCCTCAGGCCGCTTACCTATTTTCATGGCTGAACTCC
CCGCCGTTCTATATCATCATTATTTGGCTATGGATAAATAAAGTGGCGTTGGATTCAAGG
TGGATTCTTCCAAAAATATAGCGTTTACTCATGGTTACGTGGTGATCGGCATATTCCCTC
CTTGACATGTAACTGAAGTTGTGTAACCCTAATATCCCCGGTATCTATATAAACCGTAGG
GTTTTAGTTCGTAGGACAGATTAAGCTTATTAATCCTAGGGTTTAGTCCACAACATCTGA
TCTCAAGGTAGATCAACTTTATACTTTGTACCACATCATCAATATAACAAGAGCAGGACA
TAGAGTTTTATCTCAATCAAGAGGGCCTGAACTTGGGTAAACACGGTCTTCCTTGTCTTT
TGTTACCCATCAATCCAAGATCTATAGTTCGGACCCCCTACTCGAGTTTGACATCGACAA
CCTTTTCTTTAGTACGCCGACATCCTGTACACCATCATTTTCTGTTAATTAACATGGAAA
TTTTCTTCGACCTTTTCTAATGAATGGGATTTCAAGGGACCGTGTTTAAAAAAATATATT
TAAGTGACTCTTTCGGTAAGTGAAAGAAAAAGATAGCATGTATAAAACCAAACACATACT
CCCTCCGTCCCNNNNNNNNNNTCTCAACTTTATACTAGATCTAGTATAAATTTGTACTAA
GCTTAAGACAGTTATCTTGGGACGGAGGGAGTATTAGTTAGATGGAATTGATCGAAACAA
ATCGGCCCCATTACAAGACAAGAGATTGTTTGGCGTTCGGTCGTAATGAAAAAGACATGC
AACACTCTCTCCAAAGAAAAGAATCCTGCTGGATGACAACATCCCATGATATACAAGTGA
TAGCTATAGGAATCAAGGAACGAAAGTGAGAGAAAGAGACACGACTCCGTCGAGTGGATG
AGACCGTAGAGCAGCAGGACATGGAAGGGCAGAAAACAAGGGTTGGCGCATCACACGACT
TATGATCATTCGGGCTTGAGCATTCAGAGCGGCAAAGCAGCAACAAGATAGAAAGCAAGG
TCACCACCACTCGGCACAACCAAGAGGGAATACGTATTTGGGATGAATCTCTTGCTTGGC
GGATTGATGATTTGGATAGAAGGTGGCGACGTTGGGTCGATCATACATATGGTCGCTAAA
TTAAAACAGGAAAAGGAATGCGGGCTAATTAAGACAAGCGATCCCATGGACCGAATTACA
ACACACGGCACGCATGACTGGGCACATACGCATATGCAGCTGCCGACACATAAATAACAC
GACCATTGCAGCGGCCAACTGAACTGTCGAGAAGTTGCAAAAGCGGCTTTCTCTTTGGAT
GGATGGACACAGCACAGGTCGCCATTGCTTCAATCTTGCATGCACATCACATGGATAACT
CGTTACGCGTTGCTCCTGAAGGAGCCGAGGGCCTTGATGGCGCCGGCCCTGAGTATGTAC
TGGTGGTAGAAGGCCGCGATCGCCGCGCCGATCATGGGGCCGACCCAGAAGATCCACTGC
AACATACAAATCAAGCCACATTCAAGATGAGATGAAGGCAACAACTTGACATGAAGAGGA
ACTGAAAAAATGGTGGGTTTGGAGACGTACCTGATCATCCCAGGCCTTGTCCTTGTTGTA
GATGACGGCGGCCCCCAGGCTCCTGGCCGGGTTGATGCCGGTGCCGGTGATCGGGATGGT
GGCCAGGTGGACCATGAACACGGCGAAGCCGATCGGGAGGGGCGCCAACACCTGAAGAAA
GGAAGACACAGCCAAACATAACATGCATGAGACCCAAATTACTTTGTGAACTGAACTGAT
CGGCACTCCCCGTGCCGGGTCGTTTTCAGGTTGCTGGTTCCTCAAGCATGGCATGGTCAT
GCGTGCTTGCTTCGGCCGTCCGCATCATGTGACTGCTGGAGGACACCCAAAGTCGTGAAG
GGCCGGCCACTTGCCGCCCCCTTTCGATTCAAAAGCAAGGAAACTAGGTGGAGTAGCAAC
GAGCGTGAAGGCTCCCTTTTGCCTCTGCCTCCGGGCACATCGCACGCGGGTGGACGTGGA
TTGGGCTCAGTGCGCGCTTCACCGCCCCAAAGGAGTCCAAAGCCATGGCATATTTTGACG
GGATCGGCCAAAGCGGCCGAACATCACGTTTTGTCACCACGAAACCGCACTGGTGCCCTC
GCCAAAAGGGATGCTCGCACCATCCGTCACAACCTCACACTAGTCACCGGATAGAAGCAC
CCAAGGCCAGAGGGATGCAGTAACTCTGAATTTAGCTGGCCACATGATGCCAAGGAGAGG
TAATTTGTGTTACTGGCCAATAATTGATCATGGAGGGGGTGGGGGCCTGGGCAATAATTC
ACCAGCGCTGTCGTGGACGAAATCGACCACGTGTTATCACACCCAAACAGCTCAGCTTAC
TGTTGGGGCCACATGGGCCAAGGACATGGATGGGACTTAACTGGAATATAGTAAACATAC
TTATTACAGTAGTAATTGTCTGGCCACGCGGAGGTGTACCACACCACTAGATTCATCAGG
ATCCTTCATTCTTCCGTCAATTGCAGTGCCAGTACAACTGCTACGATTCACATTTACGCC
TACGGGGAGACTAATGTCACTGTTAAGGATAAACACTTTTTTAAAGCATCACGGCATCAC
TTATTTTTTTTCAAAAAGAAATACCTGACGTCCTTTTTGTTCATTCTAATGATATATAGG
ATAAAATCATAAAGGAGTACATCATTCTTCCCGTTTTGTTCATCTTAGGAGGATACGATA
TTCTTGCTTTTCCCCCTTTTTGTTCATATGGAGTATCATTCTGCTCGTTTGGACGATCTG
TCCTCATGGCATGCTATCTTAAGCTAAGCTCTAAGAAAAAAAGCTTTACTTTTTTGCTCA
AAACAGAAAACTTTACTTTCTCAAAAGAATTGTGTAGCCCGGAGCCGGAGGTATCATGCT
TACCGGGACGTGAGAGTCGCGTGCGCTGCGCTTGGGGTCGGTGGCGGAGAAGACGGTGTA
GACGAGCACGAAGGTGCCGATGATCTCCGCGGCGAGGCCGGTGCCCTTGGAGTATCCGGC
GGCGAGCGTGTTGGCGCCGCCGCCGTACCTGACGAAGTAGGCGCTCTGGAAGGCCTTGAC
GAGGCCGACCCCGCACATGGCGCCGAGGCACTGCGCCACCATGTAGAGCAGCGCGCGGAC
CAGGGAGACCTTGCGCGCCAGGAAGAGGCCGAAGGTCACGGCCGGGTTGATGTGGCCCCC
GGAGATGCCGGCGGTGCAGTAGACGAGGACGAAGATCATGCCGCCGAAGGCCCACGCGAT
GCCGAGCACGCCCACGCCGCCGCACGCCGCGTCGGCGGCGCTGTTCACCGCGGGGTCCGT
CTGGTGCTTGTACCCGATGACCGTGGCCACGGTGATGTAGAGGAAGAGCAGCGTGGCGAT
GAACTCGGCGATGACGGCGCGGTACAGCGACCACGACGCCAGCTCCGCCGCGTCCACCAG
CGGGGCCGGCGGCGGGTCCGTGTAGTCCTTGGCCGCGAAGTCGCCGCCGCCGCCGGTCTC
CATCACCTCGTCCTTCGCCATCAGTGTGTGTGGTTTCTTCTCGCTGGAAAAAAATGGAGT
TGGAGCTTGTGTGTGGTGGGGGAGTGACGGGAGGAAGGTGGTATTTATGGAGCGGGGGAG
AAGAGGTAGGTAGTAAAATACAACGAGGCGAGGGTGTGTGGTGGACGAGGCTCCGCACCC
TCTCGTGGTGTCCTTGATGGAACTGAAAACTGAACTATTTTCTTCGTCTGAATTTTATTT
GTACGAGTAGGAGGACTATATAATTTGCTGATAAGACCAAATGGGGCTTGGCTTTTGTTT
TTGTTGCTGCAGTGAAGTGAGGTGGATAAGCTATTGGGGCATGTGCTGCGACGCAGGTGC
AAACGCCAGATTCCAGAATTCACGGATATCTCTTTCCTCGATTGGAAGTTTGGAGAACTT
GCCGACTGAGCATTGTGACAAAATCTACATGATACGGTGTCTTTACTGCCATGATCCGGA
CCTATTTTCACCTTCACCACATCTTCGTGCCATTCGTTTTACAGTTTTACTGAGCATTCG
TTTTACAGTTTTTCATTCGTGTCTTTACTGAGCATTCGTTTTACAGTTTTTCATAAAGGA
AATTTACAGTACGGCAGACGAACAGCAGACGCACAGACAGAATTGATCCTATAAATATTA
TTAAACTTCCACTCACCTTTTTTAATTAGTAGTTCGTGCCATTTAAACACCATTAGAGTT
CCATATAAACACAGTTCATACGAGCTTAATAAAACGGAAATTTTAAACATAGTTCATACC
ACGCGACATAAATATAATTCAAAAAACATACTTTTAACGTAAACTAGTTCATATTTATAC
TTAAACTACTTGCCACCGCAGTTCTACTCGCCGTCACCATCACCATCACGGACTTGCCAA
CGCCGAGGTGGTGCTCCATGAGAGAGTTGGAGAGCCCATACGTGAGGTGGTACTCGTTCA
ATGTGCAACATGTGCTGCCGCAACTTCGTCGATGGTGATGGCCGCCTTTTTCGCCTCGAA
CCAGACGCGCTCGACCGTCGGGAGGCGCTAGATGGCTGGATCGATGATCTCACTAAGGCA
ACGGGAATTGCTACACGCTCGCGTGCGTGCTATTTGCGCGATTGAAAGCACAATTTTTGT
CTAAGGTGGTTTTGATAATTAATCATAACATATGTGTCATTATCCAAATATATTTTAGAA
AAGTTCAAAGATGCATTGGCTAAGGATCGTGAGGAGAACGCGTGGCTACTAGGAAAGAAA
TAGGATTGGCCAAGCGACTCAGCATTTTATATTTGTGAAAAATCATATTTGAGTCCATAG
AAAAGTCAATACTACTAAAAGGGTGAGGTATCTATGATGAATTGGTTGCTCATATGGTTA
GAGATAGTTACCAAAAATACCCAGTCATTCTCCCACAAAAGTTCTCTCTCCAAAGACTAA
ACATCAAAATCGGTGCCACCAAGATTTTCCATTCGTCTCTAATGGTTTTCCACTAGACAG
AACCTTTGCCATACCCTAAAATCTCGGTACCACCTGAGGGGGTGTAAATTAGGGGTAGGC
CCATGGACCTGCATCCCAGGGCCCATCTAAGACCCCACATGGACATCAATGTTGCCAAAG
CTACCAGTGAGTCACGGTCTCACTCGGGTAAACAAGTTCTCACTCGGTTTGCACAAAATC
ACTCGGTTCGTCTTTTGTCAGCCAGGCGTGCCCCGACACTCCAACTACAGCAAGGCGTGG
ACGACGAAGAGACTGCAACAGCCATAGAATTAAACTACTACATGAAGTGCAGTTAAGACG
GGTGTTACCAGTAACGTCGGAGTTAGAGCTGCTGTTATTAGTAACTTCCGTAGTTATTAG
CATTAACTCACCCTTGTAATGACGCTCGACAATTCATGGCGCACTCTATATAAGCCGCAC
CCGAGCTCCTAAACAAGGGTTCAACATTCTGTAATCCCACACTCCCCATAAGCAAACACT
AGTCTCCAGGCTCGAGATGTAGGGTCGTTACCA