Contig Data
morexGenes
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Map Locations of contig_391078 (2674 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map locationNo map location




Predicted Genes from contig_391078

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_54401 3 865 bp MLOC_54401.2 Available Available LOC_Os02g01940.1, FRAME:+1, EVALUE:2e-61, 13102.m00123 protein transcription factor jumonji, putative





CDS Structure of MLOC_54401






Contig Sequence (2674 bp)

>contig_391078 2674 assembly3_WGSMorex_rbca.fasta
GGCGGGGGCCGGGGGCGGGGGCGCGGGAGGCGGCGCAAGGTCACGTACGCGGACGAGGGG
AGCGGCGGAGGGACTGACGACGACCTAGGTCTGCCGGACCTCCCTTCCGCATCCACCGCC
CAGACCACGCGCGGCCGCGGCCGCGGACGACGGCCCGCTGTGGAGTCGGAGGTAACCTAG
CGCCGTACCACGCTAGCTAGGTCTCCCCTCCCCTCCCCTCCGAGCTCTCCCAGTGCAGCC
ATCCACCCAGCCGCCTCGCCGGAGGAGCGTCTCGGCGCGGCCTCGGCAGAGGAGCCAGCC
GGCCGTCTCGTTGGGCCGTGCTTTTGTTTCGTTCCTGCCTTATTCTCGCCTGCTTCCGGG
AGGAGCGCCGACTGCGGGATCTCAACCCAGGCCACCTCCCGTATCTGACCTAGGGTTTTG
GTGGTCGGTGTGGCACAGCCTGTTCGTCTTCGCTTACTAAATCCATGAGCTAGGGTTTTA
ACAGCCGCTCACAATACTCAACACATACCAGCGGATTTTAGCAGCTCCCCCCTTTAATGA
ACAAACGCTTAACGGTTGTTGCTGGCAGGAGGGCGATGACGCGATGGAGGTCAGCGAGGA
GTTGCCGCCCCCTTCTGATGTGGTGAGTATAATTTCCCCTCAAGCAAGGAGCTGCCTCCC
CCACCGCCTTCTGATGTGGTTGATATGCATACCCATGACTTTGAGCAGCTCCCCCTAACT
TTTCCTTCTGGAAGAGCTTCGTGAAATCCTCAATGGCTGCTTCTTGTTGCTCCTGGGTTG
CAGGAGAACGGCGTGGAGAAGGGCAACAAAGACATGGAGATGCCACCGCAGGATTCTGCC
GAGGTCATTGTTTGTTCTTATGGCATGCAAGTTTCATGGATTGAATTGTTTTAGAAAGCA
GTAATGCTTGCATTGTTTCATCCTCATGCTGGGTTCCTTCATTCCAGGACAAAGACACAG
AAGGGGGAACTGAGAACTCAAGACCAGCAAGAAAGCGTAGGAGAGATTCTGTTGCTGACC
CCTCTTCACTTGAGCCTAGGCCTGCGCGAGTTAGGAAGACGCTGAATCCTGCACCCAAGG
TTACAAGCTTCTTCTACCTTTCTTGTCGATACTACTGCCATCCCTTCAGTTTTCAAGTCT
AATGAGTGGTGGATGGATGATTATGACTGTGTGTGCTCATGTTGTTTGTGCACAATTTGT
AAGAATTTTCCTAGTTGCTTGTATGTTTTTCATATATTAGACAGGCACACACATAATCTA
TTTTAAATTCGCTTTTGTATATACGTAAACAAGGAGCATAACTGGCAATATGCATGCATT
CTCGAAGCAACGCTTCAGCTACCAAAGATGTCAAATACTTTACATAAAAAGTGCCTACAT
TTTCTGAATACCTGCTCACATTATAGCCTTTACCTTTCCCAGTATGTACATAGCACATGA
CATGTTTTTGTTTGTGGCTGGCATTTGCAGGATACAAAAAAGAGAGATGGAACTTCAAAC
ATGTGTCATCAATGCCAGAGGAATGACAATGGAAGAGTCGTGCGTTGTCTGGGCTGCAAA
GAATATATGAGGAGATACTGCATGCTCTGCATAAATCGCTGGTTTGTGCCCTCTAAGCCC
ATTCTTCTGTTGCATTTGCCTGCCTGTTTTCATGGAGTTAAAGCACTTGCGTTTTTTTTT
CACCTCGTATTTTGTAAGTACTTTGTTCAGTCACCATGATGTGTTTGTTAACAAAATGAC
CTGGCTTGTGTTTGTTGCGTGATCCGAACAGGTATCCGCATTTAACAGAAGATGACTTTG
TGAATAGTTGTCCATTTTGTCGCAATAATTGCAACTGCAAGACTTGTCTGCGGAAAAACA
TAATAAGCAAGGTATGCCTTCAGTCTTGTGTTTCAGGCTTCATTTCAAATTTGTTTCCTG
TCTGCAGTATGTTTGATACTCCAATGCCTCTATACACTTGCGTAATCCTGAAGCAACTTG
AGAGGGCAAATGCCATGCATTCCCGTTGCTTTAAATTTGTGTTTTCCACTGTAGTGCGGT
GTATAGTAAAAAAGCTGCCAATGCTGTTATAGCATAACGGTAAGCTCTCCAGGTGAGGGA
GCTGCCTGCCAGGGCTCGAACCCTGGTGGCACAAAAAAAAGGTCCCTCGCTGGTTCCCCT
GCTAGTGGCTGTGCCTGTGGTAATGGTGTGACCCATGGGGGCCCTGGTTGCTGGCCCAGG
TGACGGTGCAGCCTGCCAGGGTCCAGGGCCATCTCTTGGTTGGTTGGCTGAGAGCCTCCT
TAGTGAAATTCTGTGGGGCGGTCTTACCCCACCTGCAGTTTTTTTTTTGTAGTAAAAAAG
CTTCCTTTTTGGGGACTTTTGGCCATTCATGAAGATTTGAAATAGTTAGTCAGCGTAAAT
AATAGCACAAAAATAAATTGCTTGTTTGTTCCTCTTATTTATTCCACAGGTTGACAAATG
GAAAGTATCCCGTGAAGATAAAATTAAATTCTCTCATCGAACTATACACTTTCTGCTCCC
ATGGCTGAAAGACTTCCACCACGAGCAGATGCAAGAGAAAATTGTTGAGGCAACAATTAA
AGGTATTACTGTTGGCTTGTTAAAACGTTAGTTTGTCAGTTTCTTGCTTAAGAACACGAT
TCTACCCTGTCCCTTCGTCGTTTCAGGCATTGAT