| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
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Predicted Genes from contig_39022
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_54272 |
1 |
1455 bp |
MLOC_54272.1 |
Available |
Available |
LOC_Os02g53180.2, FRAME:+1, EVALUE:0.0, 13102.m06065 protein 1-aminocyclopropane-1-carboxylate oxidase protein, putative, expressed |
CDS Structure of MLOC_54272
Contig Sequence (5106 bp)
>contig_39022 5106 assembly3_WGSMorex_rbca.fasta
CCCTACACTTCTACTGTCAGACTTACACCCACGACATCGATGTTTTCTCATCGGGATTTG
GAACCAATGTCGCCGATGCATTTAGTGCGCCCGCGTTGGAACAAGTGTCATCAAAACGGA
CCTATAAAAAGGATATTCACAGATGATTTCGGTGCCGGGGTTGGAACAAATGTCGGCGAT
GGATTTGAAGGCGGCGATGACTTCAATGGATGTGGTGCGGAGTGAAGAGCGACCAAGATG
ATGACATATATGTGGTCATCGCTTTTGCATGAAGTCCTTTTACGTTTGCCCTACAAAACT
ACATGTTCGTTTGCGCACGAACTATGTTTTGTTGTTTGAATTTGAACTCATTTATGAGAA
TCGCTGTCAAATTCGCTTATTGGGATGTTTTCGATTTGCGGATCGACGCGGCGGCGCTCG
CAGACCTTGCGTAGCCGATCTGTAAAAGAGCATTTGATGTGAATATCTTTTTTTACAGAT
TCGTTTTGTGCGCTGTGACTCTGCCATCACCCGCGCCAGTCCGTAGAACTGATTTTCCGC
AAACTGAAAACGTGTTTTGCATATCGACGTATGTTATACGGGATAGAGATGCTCTGAGTC
ATGTGTTCTTGGTGGGTTTCTCGGTGATGCGTAGAACTCGATCTTCCTTTTCCCCTCCAT
CCGCTGTTCCTTTGAACTGCTCGAGATAAGTTTAACCCGGTGACTAGAGAAGGGAACTTT
TACCCGGCCCCTACCACGAGGGAGAAAGGAGAGGGAAATGTTACACTAGTACGGAGAAAG
GGAGAGGGGTGGACACGCCGATCATGGTAGTGCGACGACGACGAAGGCGCTCGAGCTGTC
TATCCATGGGTCGATCTGGGACAAGGCCGGGGTCTTGTTGTCCAGCTGCGATGCACCATG
CCGCTAGATGCGTACATGAGCGAGTGCTCCCATGCCCACTTTTAGTCGACCGGCACACGG
GAGTGTGGACAATAAGTGATCTACATGCCATTTAGCTACTGCTGCTGGTTGTTGCTGAGT
AGGACAGACAACGCCCATCCGGTAAGCACCCGAAATTACTAGCTCTGGAGCTAGCTATCC
ATGGATAGATCAAGGTACGTGCCATGTTTCAGACACAACCGACCGGTGTCCCCGGACAGC
AGCAGTCAAGTGATGGATGTTGGAGTACTACAAATATATTTGTTGACAGCAATTCTCCAC
TATATGTGGCGTGGGAAAAAATGCTACATCTACGAATTCTTAGGTGAATTACTTACGTAA
AGGAGATTTCCTTCCCTAACCTCCACTAATCCCCCCCTGATTTTCAGGGTGGGGCCGATG
CGGAATTCAATCAACAACGCCCACCTCATCATCTACGTAAGATTCGGTAGAAAATATACG
TAAGTCTAGCAAAGCTCGTGGCGTGGGTCAGGTGCGCAGCGCCTAATCTGGTCATTATCA
ACTTGTAAAGTACCAAGGCACAACTTCATCCGTACGTCATAGGTTAGGCACTATAGAATA
CTCTTATGATGTTGGAGTAGTTGCTAACGTAGACCATCAGCCTACCATATTATAGATAGA
TAGATACCCAACTAGAACTATACTTATCATACGGTAGCGTCTCCATCAGGGCATATTGAT
TAGCAAGAAGCGATATTCTTGGAGACAACTTATAACTATGTGTGCGTCGATCAGGTAGCC
TATACGAAGTTGCGGCGCGCACGCTGATCCGACTAGCTAACTCGGGCCTATTTCGGTTGC
CTTGGTCCCGACTTGTACGTCCAGACAGCTTTGTTCCATATTCCATGCTGACCAAAGTAG
TTATAACTAATTAAGCTGTGTCGTAATCTCGTACGTCCCGGCTAGGTCATAGCCTTCTCT
CTGTCTTGGGGATGGGCTCTGGGATGCATATGCTCTTGGACGAACAATACATTTAAAGTA
AATAGCAAATACAAATTTAAAATGTTGTTACTGTAACAAGCCTGCTTTATAATTTTCGTG
CAAAACGAGATAGCAGTGCTCCGTTCATGAAAAAAACAAAATTTAAGTGTAAGATTTAAT
GTATTTGTTTTTCTTTGTTTGGCTAGGTCTCAGTCGAGTGAAACTTAACCAAGTCTCAAT
CAAGTGTTATTTACCAAGTCTCAAACAAGTGCTATAACAAATACTTCCTCCGTCCCAAAA
ATAACTGTCTCAAGCTTAGTACAACTTTATACTANNNNNNNTACAAAGTTAAGACACTTA
TTTTGAAACGAAGGGAGTAGAAAAGAAGTAGAAAAAACTTAAATGTATTTCTTTACATAA
ATCTTCATGTAAGATCTCACGAATATAGTATTGACTAACACTCAAGCCTCAGTCTATTGA
AATTTAGCAAAAATAATAATAAAGTTAAACAGGTCAAAATATTTAAGTTTTCTTCCTTTA
AAAATACTTAACATTTTTTTTTTGATTCGGAGAAGGATATATGCTCTCGAAAGCCGAACT
TGATTTCCGTCTCTCGCGCGTCTATAAATTGGGCCCTCCATACCGGCCTCAGAGCGCACA
CACATTCTCTGCTTCTGCTAACCAGCAGCAGCACAAACACACATACAGATTGCGTGAGTT
AGAGTGATCAGATCGAGAGCGATGGCAATTCCAGCTAATGCTGCCGCCACCTCGTTGAGC
TTCCCGGTGATCCACATGGAGAAGCTGGAGACAGAGGAGAGGGGAGCGGCCATGGAGGTC
ATCCGCGACGCCTGCGAGAACTGGGGCTTCTTCGAGGTGCCACTGCCACACGCCCACACA
CACACACATAGAATTCTCCTTTAGCAGAATTATAGTAGATTGATTTTGTCGAAAGCAGGC
ATAAGTAAGATTCTTGACAAGATTAACTGACCTTGCGAACAGCTGCTGAACCATGGCATC
TCGCACGAGCTGATGGACGAGGTGGAGCGGGTGAGCAAGGCGCACTACGCGGCGTGCCGG
GAGGAGCAGTTCAAGGAGTTCGCGGCACGGACGCTGGAGGCCGGCGAGAAGGGCGCCGAC
GTGAAGGACGTGGACTGGGAGAGCACCTTCTTCGTCCGCCACCTCCCCGCCTCCAACCTC
GCCGACCTGCCCAACCTCGACCACCACTACAGGTACGCAACGCCTGATTACTTAATTAAT
GAACTACTGCTACTTAATTAGTAACTAACTAATAATAACATAAGAGACCAGCTTCGGCAG
GAATGGACTAAAAATATATCCAGCAGATATAGTAGTGCTGCCAGGATTTCACCAGGAGAT
AAGATTGCTTGCTCACATCGAAATCCAAATTCTTTTCTAAAAGAAACATCAGAATCCTGA
TTACGTCTAGTAGTAACCAACACGACTGGAATCGCCTTTTTTAGCAAGTGACACTTGTTT
GTCTCGTAACAAAAGCTGCCTTTTTCGTGTCGTCGTTTGCAGGCAAGTGATGAAGGAGTT
CGCGTCCGAGATCGAGAAGCTTGCGGAAAAGGTGCTGGACCTGCTGTGCGAGAACCTCGG
CCTGGAGGAGGGCTACCTGAAGCGGGCCTTCACCGGCTCCAATGGCCCGACGTTCGGCAC
CAAGGTGAGCAGCTACCCGCCGTGCCCGCGCCCCGACCTGGTGGACGGCCTCCGCGCGCA
CACCGACGCCGGCGGCGTCATCCTGCTGTTCCAGGATGATCAGGTCAGCGGGCTCCAGCT
CCTGAAAGACGGGGCATGGGTGGACGTGCCGCCCATGCGTCACGCCGTCGTCGTCAACAT
CGGCGACCAGCTGGAGGTGATCACCAACGGGCGGTACAAGAGCGTCATGCACCGCGTGCT
CACCCGCCCTGACGGCAACCGCATGTCCGTCGCCTCATTCTACAACCCCGGCGCCGACGC
CGTCATATTCCCGGCCCCAGCGCTTATGGGTGCTGCCGAAGCCGCTGGGAAGAACGAGGG
CGAGGAGGGCACCGCCGAGTACCCGAGCTTCGTGTTCGAGGACTACATGAACCTGTACTT
GCGCCACAAGTTCGAGGCCAAGGAGCCGCGCTTCGAGGCCATGAAGGTGGATGCCGCGCC
CATCGCCACCGTGTGAGCCCGTACGCGCTCGGACCCGGACAAGAGTATTTCTAGCCGTGT
GTTTTCTTTTCTTGTGGGAGTGACATGCATCCGGCCGGTTAACTTTATTGCTTCTTAAAA
TCATGGACTATGTTACTCAACGAACCGTTTGATGGATGACCATGGCAAAACGAATGCTTT
CCGCAGCAGTTTATATGTCAGCGGTATGGCAACGTATTGTCAATTTTCGAAACAAAAAAT
TTGATGGCCATATAATTTGCCATATGTTTTCGAAGGAATTGTCATGTGTGTTTGAAGAGC
TTGCCATAACAAACGCTTGCAGATGCCATGCTAGCCAGGAAATGCTCACTGGCTATTGTG
GTCGAAGGGCATCTGCTACCCAGCAAATGCTCACTAGCTATTGTTGTCGAAAATCATTAC
ATCGTTTACTACTAAATGAAGAATCTCTCATCGCCCTGGTTACATGAAATCTTGTTGTTA
AATGATGTTTTGGATAGCTCGTGAGCGACTTGGTTGGCATCCCTTTGACAGTGTTCATAA
GGTATGACTACAAGCTTCACTGATAAACTGTTATGGTCTACACTAATAATTGCTGCAAAG
AGAGCTTTGGCTCAGTGGTTGGCATGCGGTCGTGCAGCCTAACGATCCGAGTTTAATTTA
AAAAAAAGCTTGATGTATGATGAAAACAATCATAAAAAATAATCTTGATACTCATTTAAA
TAAATCTAAGGGCCATGTTTATCTTGGTACTCATATAAAAATGGCCGTATGCATCCTTAG
TTGGTGCACAGGCCGGGAAGTAAAAAAATCTCTCCCATTTTTAGGCCACCATCGGAGATT
TTTCACTCCGTGCCTCGAGGGTGACTTAGGGGTGATCCCTCTCCTGCCACCGGCGTAGAC
ACCTCCTCTTCCCGCCTCCCTCGCCGCTGTATCAGGCTGGCGCCGGGCAAGCCTATGGCG
CAACCGAGGACTGCGGCAGCGAGGCCCTTGCTGCTCCGCCTTGCGGTGGAGAGCGATTGG
ATCTGGGGCGACGGTCCTTCCGGCAAGGCCCCTCCATGTTGCGGCAAGCGGGGGGGGGGG
GGGGGG
