| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
| No map location |  |
 |
Predicted Genes from contig_38904
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_54122 |
9 |
4060 bp |
MLOC_54122.6 |
Available |
Available |
LOC_Os02g07740.1, FRAME:-1, EVALUE:0.0, 13102.m00885 protein RNA binding protein, putative, expressed |
| MLOC_54121 |
2 |
2915 bp |
None |
Available |
Available |
LOC_Os02g07750.1, FRAME:+2, EVALUE:3e-145, 13102.m00886 protein cell cycle control protein, putative, expressed |
CDS Structure of MLOC_54122
CDS Structure of MLOC_54121
Contig Sequence (7716 bp)
>contig_38904 7716 assembly3_WGSMorex_rbca.fasta
AGGCGTCGCTTCTTTGCTATCTTCACAAAAGGTATGCTGAATATGCCCTATGCTGATTCG
ACGATATGTTCGCCATCTTTGTTAGCTAATGATTGTTGTTTTCTTTGCTGTAGGTCGTTG
AGATTGTTGATCGATACGATGATGCATGCGTCCCGTCTAATGTTACCGACAAACTTGCCT
ACATCCAGAACTCAACGATACCTAAAACCTGCCAAAGGACGCTGACGGTAATGAGCTTAG
CTGCATGCTTCTATAGGTGTAATCTTTGGGAATGGCATAACAATGATCACTGGAACATTA
TCTAGTAGCAGAGTGTATGATATGCCAGTTAATTCACAAATATGCATCTTCGTTTAAGAA
TCAAAGTAACCCTTGTCTGAAACATTTCTTCATTGTTTGTATGTTGGTCTCCAGGTCCCT
AAGGATATGAAGCAGCCGATTTTTGTGTATTACCAGTTGAATAACTTCTACCAGAATCAT
AGGAGGTATGCACTGTGCTTTCCGAGGTTACCAATATGTCAAAGGCGTTGAAGTAAATAC
AATGGATCTTTGGCTCAAATATGTGCGCCAAGTTTTTGCAGCAGTAGCATTGAAATGAAT
AAAATGAAGAAAAGGGAAAAGCATTGTTGATAATCTTTAGTTCACAAAGGGGTAACGGTT
ATGCAGAGGAAGGCTTGAACAACATAGCTTGAAGTGGGGGTGGGATTTTCGAAGGAAGAA
GAGTGGACTAAAAACTGGAATGAGGGGGTATAGATGAGAGAGTAATTAATTAATCGTGTT
TATTAGACTTCTTTTTGCCAGAAATTGCTTGTATGACTTGACCCTAAAAAACTTGTCTAA
ACTACTACAATAAACCCAACTATCAAGGAAATTATTTAATATTATGTCCACTTTCCGACT
AATGTTGCATAGGCATCGCACATAATTACATGAAGTGCCTAGCCACGATAATAACACCTA
CTGATTGTTGTCCAGATGGCTAAAATGTTGGATATTGACACATCAACATGTCATTTTAGC
AGTTAAAGCTCATTTTTATTTGCTCAAACAATTGTTTTATACTAAGTTCTTTTAGGAGCC
TTATACTTTCCCTGCTTACATATCACATTTTCCACATTCAGATATGTTAAGAGCCGGAAT
GACCAGCAGCTAAGAGATGCTAGTAAGGCAAACGAGACCACTCTTTGTGACCCCGAGAAG
ACCACAAAAGATGGATTGGCTATTGTTCCATGTGGTCTGATTGCATGGAGCACATTCAAT
GATACATATTCCTTCCAACACAAGAGTAGGAACTTATCAGTCGACAAGAATGACATCTCT
TGGAAGAGTGACAGGGATCACAAATTTGGAAGTGATGTCTTCCCAAAGAACTTTCAGAAA
GGTCCTCTTATAGGTGGAAAAACACTCAACGAATCTATACCGGTATGCTTTTGGGTTTCA
ATTTCACCCTGTACCGTAAGATTATTGCAATATGTAGTTGACAAGCAATAATTACTTGGG
TATATTCTGGCCGTCCAATTTAAAGATAAATTGACTTCAGCACAATCATTTTCCATTAGT
TAAACCAATACAGGTTCTTTGAGCAGCCAGAAAGATAACATTTTGTGCCCCTGAAAGTTA
CTTATTTTACTTGCTTTCTGTGCAGCTGAGTGAGCAAGAGGACCTTATTGTTTGGATGAG
AACTGCCGCGCTTCCTACATTCAGAAAACTGTATGGTAGGATATATGTTGACCTCAAAGA
AAATGACACCATTACTGTTACGCTGGACAACAATTACAACACGTACAGCTTTGGTGGCAA
AAAGAGTTTGGTGCTTTCTACTTCAACCTGGCTTGGTGGAAAGAATGATTTTCTTGGGCT
TGCATACCTCACTGTTGGTGGACTCTGTTTCTTCCTGGCATTTGCATTCACCTTACTCTA
CTTGATAAAACCAAGGTTAGTGGCGCATAAGCTCTTGTATACCGGTCATATTAAGTTAAC
ATCTTTCTCGCTGATCTGAAGGCACTGCTGATTTATTTTTTCTGGTCTCAATGCAGAAAA
TTAGGAGACAACAATTACTTGTCATGGAACAAAAACTCTGCAGGCCATTGATACACTCTG
AAAGTTGATTTCCGCATTCAACATCAAACGATGGCCTTATGGTTAAATTGTATCTTGTAC
GAAAATAGCAATTTTTGTTTTCAAGCTGTTGTCATGTACGTGTATCAAGTAGACTTGATT
TTTTTTTTACAAGCTGTTGTCAAGTACGTCTAGTAGACTTGTGTGTATGAGCAACACAAA
AGGATGTACATTATATACTGAAATATAGATACATGGTTCTTTTGTTGAAAATTGCATTCC
CCATGAGTGAAATTGAATCTCTATGGAATGATCTAATCTCTGCTCATAATGTCAGTTTTA
AACTGGTGCATTCTGTTATTCCACTTAACATATTTTTGGAAGTACACTCCATAAAGAATA
ATGATCTGCAAAAGTTGATAAGCTAATCTTTGAAGGGTTACAAGATACACATGTTCTTGT
TCAGACAATTTCTAGACCTAACCTTATGACTAAAATATAACATCAACTGGAGGTAAAACT
TCAGAAATCAGCTCTTCAGAAATGGTTACTGGTCAGTAAATTGTTTTGACTGTTCCTTTT
TCACATTACTCGGAGTAGGTAATTGCTGAGATATTGGCCTTCAGGATATGAAGGATCGAT
GGGATGATCGCAAGCTGCTCCTGCTTGACGTAAAACTGTAACCTTTCGACCGGCCATTGA
TGCAGCACCCTTTAAGTTGGAAGCAAGTTGAATGATCATCAATGTGGATAAACAAAAGAG
ATTTGGAATGGAGTAGTATGCATGCCAATATGAAAAGAAACTAAAAGGGCCATGAATATT
CATCGCAGACCTTCTACAAATTTTCAGTTTGACATGCTGGAAAACATTAAATTGAATCAA
TAATACAAACTCCAACTGGCACAGCAATAAAATTCTAGATTTGGGTAAATAGGACCCAAG
AATCCATGTGACAAGGTCAGGTCCAGGTGTACGCTGAATAGTTCTGCAAGACGGGCAACA
CAAAATACCTGAATGGTTTTAAGGAAGAGACCACTTTGGGTCATAGCTCCAGAACAAGAG
CATGTCATGAGCAACCCCCCTGGCTTTACCACTTGCATTGCAAGAGCGTTCAGGCTTCTG
TACATACCGGATGCACTTTGTAGCACCTACAAATACAACAGAGAATCCTCCTTCACTTAC
ATAGAGCAATTGTTTGTTCAAGACTTGAAGTGTACAGACAGTCTGTGAGTGGGATAAAGG
GTTTTGCTGATGTTCAGGGCAAGTGCAAAAGAGCAAGTTTAGTTAGATGCGTACTGAGGC
ATGTACAAATGATCCATTAACTTTTTTATGCATAACATGCTTCAGAACTTCACATGATCA
CATCAAAGATGAAATGATAATCAAGCCAAATTAGCAACTACTCCCTCTGTCCCATAATAT
AAGAGCGATTTTGACACGACACTAGTTAGTGTCAAAATCACTCTTATATTATGGGATGGA
GGGAGTACACGCAAATGCTTCATGTGATGTATACCTTCTTCCGGGGTGCCAACTTTGGAG
GATCGAGGATTACCAAGTCCCACAGCTCATTTCTTGAGATAGCACCTTTCATGAATGCAG
TTGCATCTTCTTTTAAGAACGAAATTCTCTCAGCATCAAGCTTATTCAGAAGAATATTCT
CATTGGCAAGATCTAGTGCAGATCCTGATGAATCAATGCCTGAAAATGGTACTAGTCAGA
TTGTCGTTTTTACAAGCCAAACCTGTAGAGTGTCATAAAGTGATACTAAAAAGGACACAC
TGTTGTGGGTTTTCCATATTAATGATACAACTAAGCTATAATTCAACTATGATGAACTTT
CAGAGCATCTGAATGGAGGACTAAAAGGTCCACTAGCTTACAGTACTATACCAGTAACAT
TAGTTGCACCACCCTTGGCTGCACTAAGAGCAAAACCACCACTGTAACAGCAAAGGTCAA
GAACCCTCTGGCCCTTCGAGAGTGTGGATATGAAGTGGCGATTTTCCCGTTGATCTGCAT
AAAAACCTGTCTTCTGCCCCTCCATGGAGACTAGATAGACAATGCCATTTTCCATAACCT
GTACATAAGAAAAGAACACAAGTGTTGGAACTACGAGCAACACAAGTATGCAACATAGCG
GGTAGAGAAGATTGACAAATACTATAAGTGAAGCTATTGCAATGCTACATTCAGTCCCAC
ACAACCGCACACACCATCAGTCTCTTTACACCAGCTGTAGTTGCTAGCTTGCTATATTAA
TTGAATATATGACAAACCCGGTTCAAAAAAATATGGCAAAGGCAAAAATATACATGAATT
GAAGCTAAACCTCCTCGCATTTTTTTAAGCTGAACCATATGTACCGTTACTTGCTAAAAA
TTTGTAAAATATTAAAATCAAATTTCCTTAAAAACATTTAAGTCAGCAGACTCACCTTCA
CAGTTCCAGAGTATGAAGAGGGTGCAGGTTCTGTTTGCTCTGACATATCTAATCCTTCTT
CTTTTAGAATATCACTTGATGACCTCCACTTTATATGGTTAACATCACTAACTTTGCTAA
CAAGGGACTGGATTTGTTGCCTATATTTCTCAACCCAAGCAGCAGATGAAGCAATCACGG
CAACATCAGCAAATATATCCACTATCAGACCAGATAATCTGCATTTCAAACCATTGAATA
TTAATAGTTGCACTACTATGCATGAATACAAGAATGAGACAACAGGCAAGGTTCCGGAGA
GAGAAAAAATGCAAGTCATTCAATGCTCAAGATCAGTATTCTCTGCTGCACATGTTGAAA
ATATACAGGGCAATATAACTACTTATTGTTTACACAAAGATATTAAGATACAAAGTTGAA
CTAAAAATGGTGCTGAATGATGAACTAACCATGCTCCTTTCAGTGATGGATATCAAGGTG
GTTTCTTTGCTAACTAAAGTATAGGAATGGAGAACAGTACATACCTGTCGCCTTCACTAT
TGACGAGACGGTAAGCATTTGTATTAGTTGAGGGGAAACCCAAACTACGCCGTAAATCCA
CCGCAGAACAAAGTCTTTCTTCGAGCAGCCTTTCCATATTTAATGCAGAGGCTGGATCTC
TGAGCAAAACAAGAATATGGGATATTCAGCACAAGCTCACAAAATTTCAATAACCATAGA
ACCTCAACAACTGTGTCACCTTTTTGCCTCTTCTTCTAGTTGCATTAGCCGAACACAAAA
CATAGACACGGAGTTATAGACACCCCACCCGATAGGTTTCTCTGACCCATCAGCTACCAA
AACAACATCACCCGTTTTGGGAGGAGGCCGGCCAATTATTCTATCAACAGCACCACTGTA
CACCATTGGACTCCCACCTCGGAATATCTGAGTCTTGCCCTTCTTTAGTACCACTCTCGC
CAAACCTAAAAAGGGTGCTTAGTTGTTAGTGTATACTCCCTCCGTCCCAAAATANNNNNN
NNNNNNNNNGTACAAAATTTGTACTAACTTAGTATTAAATTTGTGTCACTTAGTATTAAA
TTTGTGTCACTTGTTTTGGGACAGAGGGAGTACTTCGATTCGAGCGAAGGAAAGAAAGAA
GTGCCTACTGGACATAACCTATGCTTAACCCAAACAAGCAAAATGGGCGATGCTTGATTT
ATTGATTTCAGCGTTGTGAATGGAATCTAGCCAACTTTTTGGACAAGGCCCATCATTCCA
CTTTGTGGTGATGCATACCACTCATTCGTGACACTAATTTAAATGAATGATGAACCGTTT
TTAGGAGACTGTAATTATCATCGTTTCAAGCTGTTGTTACCATAAATGATCTCCGGGGGT
AGTAGAACTTTTAACAATTGACAACCTCTGACTTGGAGGGTTATGAGCAAGTAAAAGTAG
CAATATAGGTCCTCATAACTGCAGGCCATGAAACAATGACCAGGCATCTCTCTACACATA
CATTTACAGTTATTTACCACTCACTACAACTGTATATCAAGCAATGAGCGTCCAAGCTCA
GGAAATGGACGCACTGGCAAACGGCCGACCCATAACCAGATCGAAACGCAACACGGGGAA
CAAATGCGCAGCTCACTTGGTCGTTTCAACAAACAGCTCGTCGCCATGGCGCTCCCACTC
GCCCCCCGCACGTAGGACAGAAGTGACGGTCACAAACCTCGCTGCGCGGGACTGGAAACG
AGGGCCGCGGCGGAGAGAAGGGCGACAGCGAAGCCGCTCGACAGAATGCCGGCAGAAGAC
TAGGCGAGAGTAAAGGGCGTGGACCTTTGCGGTCGGCGGCGAGCTCCTCCAGGGCGGAGG
AGGAGGCGACTGCGGAGGCTGCGACGGAGGAGGAGGGCTTCGCGAGGCGCGCCCTGACGA
GGGCGGGCACAGACGCCGGAGCCGCGGCGCCGCAGGCGCGGAGCATCGCGTAGCTCTGCG
TTGGCGCTGGCACTGACTATAGCTGCCGAAGTTCGCCACCAGGTAACGAGGCTTGTGGAT
TGGTACTTCAAGTTGCGCATCTGTGTGTCACTGCGACGTGGGGCCTTCATCAAAGCCAGG
CCGTAGGCCCAAAGCGCTCGTATCACTTTTATATTAGAGCATCTCCACCCATTCCGCCCT
CAGCGTCATGTTGCGCGAGCGCTTTTTTATCCGACGCGAGCGAGTTTTCAGTCGCGTCCC
CAGATTTCGATCCCAGATGTCAACGTTTTTTTTTCTTTTCTGCTGTCAAAAAAACGTCAC
GAGTTCGACGATCATCATGTCACAAGTCGACGATCAGCATTCCATAGTTCGACAATCAAA
CACACCAATAGTTCGACGATAAAAAAGAAAGGATAAAAACCGGATCAAACGGCCGGCTCA
GCGTGGTGCGGCTCCTCTGCCGCAGGACTGGTCGGGCTCGTCGGCGGCGTAGTCGCGCTG
TTCGTCGTCAACGTAGTAGGGCTCGTCGTCGACGTGGTTTCTGCGCTCGGTTCCGGTTCC
ACCTCCACCGCTTCTTCCTCTCCCTCCTCCTAGGCGTCGTCGAGCTCGTCGTCAATGTCA
TTGGCGATGTCCATTGTTTCATCATGCACGACGAACTTCGGGTGCGACACGGCGGCGACG
GAACCGCTCGTGATGACCTCGTCCATGTCGGCATCGGTGTAGTTAAACTACAACGGCGAA
GGGGGCACGAATGAAAGGACACCACGACGTAGAGATGGAGCAGGCGAGGATGCTGACGAG
TACGCCAGCGGGGAGTAGCTATAGTGGGTGTTGAGGCCGGCGTTGAACGCGGGTGAGAAA
GTGCGCCGGTCGTGGCCGAAATCGGTGAAGGAGGAGGGAGGAACGTTCCATGCGGGAAGG
TGGTGTTGGGATTGAAGTCGCCATGCGCGTCGACGTCGAAGTAGCCAGACAAGGGCACGT
ACCCCGAGGGCGGCATCGTCAGCGAGAGGGTGGCCGACGCAACATCCTGGCGACCCCTCC
ATGCGGCCTGTGGGTTGCGGCTGGGCGGATTCATCATCCCCGCGNNNNACGCCTCTTCCT
GATCGACCGCGGCCGCGACCGCCGCCGTCCCCGCCTTCGTGGCGCCACTGATCTTCTTGG
CGTCGAGCATCCTCCACCGGTGTAACGACTAAGATGCGACCCTTTCCTATTTTTTGGGCG
ATGCCCAAAAAGGGAAAGAGGCGCATCTAAACGTTT
