| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
| No map location |  |
 |
Predicted Genes from contig_38903
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_54119 |
2 |
3575 bp |
MLOC_54119.1 |
Available |
Available |
LOC_Os03g19310.1, FRAME:+2, EVALUE:0.0, 13103.m02311 protein glycosyltransferase, putative, expressed |
| MLOC_54120 |
5 |
3759 bp |
MLOC_54120.2 |
Available |
Available |
LOC_Os03g19300.1, FRAME:-1, EVALUE:0.0, 13103.m02310 protein peptide chain release factor protein, putative, expressed |
CDS Structure of MLOC_54119
CDS Structure of MLOC_54120
Contig Sequence (7731 bp)
>contig_38903 7731 assembly3_WGSMorex_rbca.fasta
AATGTCACAGCTGATCATTTTTTTTGCGTGGGCACCTTCTATGCTCCTATAGACTCCACC
ACCACAGAGTTTGATCATCGTTTAAATGAGGTATCTTCAGAGCTGCTCCAGAACTTCTCT
TGTCTTGACCCAAGAAACTCCTTTTCTAGGTTCAACCTGAATAAGCTTGCTAGGCTCACA
GAGATTTATCATGATGATTTCTCTGATTATGAGCGTGAACATATAGAAGATAACCTTGAT
CTATTCATTATCCATATGAGAATAATTGAAGTCATTAGATCTTGTCATGATGTTGCAAGT
CTGGCTAAAATGATGGTTGAACTCGAAAGACATGTGATGTTTCCTACTGTTTATCGCCTC
ATTGAGTTGGCATTGCTACTACCGGTAGTGACGGCAACAGTTGAAAGGGCCTTCTCATTA
ATGAAAATCACCAAGACTGAGTTACGCAGCAAGATGACAGATGATTGGTTTAATAACTTG
ATGGTTTGTTATATTGAGAGAGAGATCTTCAAAAATATTGATCTTGGTAAACTAAGGAAG
ATTTCTAGAATGAGGGTAGGGCATTGCCATTGCCTTGGTCTTCTAGACGTCATTGAAGGT
TTCACTATCAGTATGTTTTAGGTCCTTTTTCTATTGAAACATGCCTATATTTTCGTTGTA
TTTGGTTTTTCATTTGTAAGGTGTATTGATTTTTTTTATTTGCAATCAATAGAATTCTTT
CCTACAAACTTCGTCACACCTTAAATTTTTTCCGTCCTCCGCCATTGCAAACAACGTGTC
TGTTTGGATCGCTTTGTTAAAGTTGCTCTTGCCATTGCTCAAGCGCTGCATCTTTTGCAC
TTGGGAAACGGACTAATTTGTGTTGGTTGGGTGCGCGATTCAGGCACATGCACCTACCAT
TTTTACATGTGCACGTTAGCAGGAGCATATTCTCTATGACAGGCATTCACGAAGACTCCA
AGGCCAGCCGGCGCCGGTCGTCGCCGTCGCCAAAACAACGGAACCTCCAAACCCAACGCG
TCATCGCCTCTCTGATTTAACCAGGAGTGGTACGCCGTCATCATCATACTTATACAGTAA
TACATAGAGTAGAGCGTGTAGGGTGCAGCCGCGAGCGCGTGCATGCCTCTTCCGTCCTCA
GCGATGGCGGAAGAACACGCCGGCGACCAGCATGAGCAGCAAGTGGCGGCGGAGAGGCGA
GCACGGCCGAAGCTATTGTTAGCCGTCCCGATCATCCCGATCGTCCTGTTCATCTTCGCG
CCGTGCGCGCTCTTCTTGTTCACGACCGACCTGGCGCTCCCACGCATCCGCATCGAGTAC
GCCCGCCGCGATGGCGACCGTGACGCTCCGGCCAGTGCGCTAGCGAAAACGCTGCCTCCG
CCGCCGCCTAAGGCGATGGTGGTTGTTCCTAGCGAGGAGCAACAGCAGCTCCCGCCGCTG
CGGCAGCTGACCGACCGGCCGTACTCGCTCGGCCCGAACGTGTCCGATTACGACGCCCGC
AGAGCGGCTTGGCTGGCGGCGCACCCTCGGTTCCCGGCCTTTGTCGCGCCGGGGCGGCCT
CGGGTGCTCGTGGTCACCGGCTCGTCGCCGCGCCGGTGCAAGGACCCGGAGGGCGACCAC
GTGCTCCTCCGGGCGTTCAAGAACAAGGCGGACTACTGCCGCGTCCACGGCTTCGACATC
TTCTACAGCAACGCGGTGCTGGACAGCGAGATGTCGGGGTTCTGGACGAAGCTGCCCCTG
CTGCGCGCGCTGATGGTGGCGCACCCGGAGGTGGAGCTCCTGTGGTGGGTAGACTCGGAC
GTGGTGTTCACTGACATGCTGTTCGAGCCGCCGTGGGGCAAGTACGCGCGGCACAACCTG
CTGCTCCACGGCTGGGACGACGCGGTGTACGGCGCCAGGAACTGGCTGGGAACCAACGCC
GGCAGCTTCGTGATCCGGAACTGCCGGTGGTCGCTGGACCTCCTGGACGCGTGGGCGCGC
ATGGGGCCGCGCGGCCCGGTGCGGGACAGGTACGGGGAGGTGTTCGCGGAGGCGCTGTCC
AACCGGGCGGCCTACGAGGCCGACGACCAGTCGGCGCTGGTGTACCTGCTGGTGACGGAG
CGCGGCAGGTGGGGGCCCAAGGTGTTCCTGGAGAGCTCCTACCTCCTGCACGGGTTCTGG
GAGGGGATCGTGGACCGGTACGAGGAGATGCGGAGCAAGTGGCGGCCGGGGCTCGGCGAC
GACCGGTGGCCGCTCGTCACGCACTTCGTCGGGTGCAAGCCGTGCGGGGAGCAGAGCGCG
AGCTACGAGGCCGCGCGGTGCCGTCAGGGCATGGAGCGCGCGCTCAACTTCGCCGACGAC
CAGATACTCGGACTCTACGGGTTCCAGCATCAGTCGCTCAACACCACGGCCGTGCGGCGC
GTCAGGAACGACACCGGACGCCCGCTGGACGCCGACGACGAGCAGATCGGCCGCCTCCTG
CACCCGGAGTTCAGGGCCGCCAAGCCATTGTGATCAACTGGATCCTTCGGTTGGTTTGGT
TTGGATGTGAACGTGCAGACATCAGAACACGCAACACGTCCTATTTTACAGACAAGGTTT
TCTCTATGACCATGTATGTATGTATGTTGCTGCAGGCACCATTGTGAACTGTACGTCATG
TTAGTAGCATGCAAATGGATGCTTCATTCTTCATCTCCAGCAAGAGCAACAGCAAGCTTA
CAGCTTTATTTCAGACGGCAATGCAAAAAAGGGAAACTACAAGAAAATATATGGTCGCCT
CCATGCATCTGAACATGAGCAAGAAAAATGGCACCTTATCCTAGACACCCAACCTGACAA
ATCAAATTTTGTTTCAAGTCAGATCACTAGCAGCACCTCCTTGCAGTTGAAACACAATAT
TTGCACTGGAATGACTGTTCAATCACCATTTGCAACAGTAATATATAAATGAAAATATAG
GTCAACGATCGATCATAGTTTCATTATATTGCCTCTCTAATCAAAAACATTTCCGTTACA
TTACCTTCTCTAACTACCAAGATCGACTAAAACATTCGTACTAGGAAACTAGCTCTGGTT
TTTTGCATTTCACAGTTATTCCGCACCTTTCGCGCCACTCGAGATCGAGGTGTCCGTTGT
ATTTGTCAGAGTAGTAAAGAAAACCTCTCTTACTGTTAGTTGGGCACTGTCACAGTCTGC
TCGTGCTGATAATAAATGATAGACATGGTTTTTCTTCAGACACTTTCATCAACTTTATCC
AATGATAATGACAAAAAACTCAGTATGAAATCATCTAGGTCGCCTTCCAGGACTGAATCG
GGATCAGACACTTCATAGTTTGTCCGGAGATCTTTGACCATTCGGTATGGCTACAACAGA
AGGAAAACATGTCAGTTTGATCTGAAGAACAATGATAAAAAATATGCCACAAGCTTAAGA
TTTTACATTCAAGAACATCTCTATCTGCACTATATGCTAACTCATTTCACTATTTTAATA
GCCAAACGCTATGATATTTTTCACATTTTTTCTAAAACTTTACTATAAAGCTTCATGGCA
GAAAATTTAAGTAAAACACATACTGAACAATGTAGCTGCATGGCAAAGTTTGTACGATGC
AGCTTCTTTCTTGATTCTTAATCAACAGCATGTGAGGACGCAAACAATTTAAAAGGGCTG
ATGAATGAAGTGGAGTAGATAATGCAAGCTAAAGTTTTAAGTTTATCCTTGCCAAAGAAG
TTAACCTAATCTTATTAATCTCGAAAGACGGAAGCCTCACCTGTAGCACATACGATCTTA
TTTGGTTTCCCCAGCTTATTTCAGAGAGTGATTGCGTGTGCTCTGCATTCATCTGTGCTT
GACGGGTAATCTCAAGCTGGTCCAATCTAGATTGCAGCACAGCCATTGCTGATGCCCTAT
TCATATGTTGTGACCTGCATTTTTCTTAAACAAGTTAGTACACATATGTTATACGCAAGC
AAAGGATTCAGGAAGTCCCTATTGGTTACCAGTTAAGAGATATATGATACAGTGCTGGTT
ATATTCAACAGATTGATAACATATTTTTCTTGAGCTATGATTAGATATTTGAATTCAAAA
CGCATCAAAACTACCTTTCATTTTGACAAGTTGCCGTTGTACCAGTTGGGATGTGCACAA
TTCTAACAGCACTTTCTGTGGTGTTGGCATGCTGGCCGCCGGGTCCACCAGAACGGAAGC
GTTCTATCCGAAGATCCGATTCATTTATCTGGTATCGGCTAGAGGACTCACCAAGAATAG
GTATTACAGCGACAGCAGCAAAGGAAGTGTGCCGCCGCTTTCCACTGTCAAATGGAGAAA
TCCGCACTAATCTGTGAACTCCTATTTCAGATTTGGCATATCCAAATGCATACTCACCGT
CAACTTTGATAGTAGCCCTCTGGAATGGCAGGTATTCAGTATAAGATCAACAGTTTGCTA
AAATCGGCCTCAAATGAAAAGTTAACAGATAGTAAAAAGAAATGAGAGCTTAATGTGCAC
ATGGCTTGATTTCACATTCGTTGTCATCTCTATAAATGGATAAAACTGGTAGTAATTATG
AATAAAGTGGTGAACTGACTGGATTCAGTGCTGGGAAGCGATGAAAAAATAAACGGGCAA
ACCTTGATTCCTGCTAGTTCACCAGGCATTTCTTCTATTACAGTGACTCTGTATCCCCGT
CGCTGAGCCCATGATTTGTACATGTTCATAACCATGGCAGCCCAATCCATGCTCTCAACG
CCACCGGCTCCTGCTTGGACCTGGTTATGGGATCATGCAAGGAATGCCACTAATAACATT
ACTATAAAGCTTAAAAGAAACATTACTGTTCCAATTTTTGGGCTACTGTACAGGCTACAG
AGTTATAGAGTGAGCACTGCACTAAGAAATAAGAATTGCTTAAGATAACGAGACGAACAT
ACCTCAATGAAGCAAGGGTAAGGGTCATTATCTCCAGAAAGCAATGCGTTGAGTTCTTTC
TCCTTTGCTTCTCTTCTCATATCGGCCAATGCTCTCATGGATTCCTGCACAGGATAGTTA
ACCGGCTATAAAACAAGCAGCTAGTTTGCACCATGAAGGGTTCCAGCAAAGATCCATGTA
AGTGTGTTTGGAGCTCAATACAATGTAATTATGTACAAGAAGCAATGTATTCACCGTCTC
AAGTTCATTGTCACCCTCGTCACGTGCAAGCCTCAACATATCGATGTGCTCCATCAACTG
TTGCTCGAATTGATTCACTGACTTAATCTTGCCCATGAGCTCGCCTTGTTCACGACTAAC
CTTCCCAGCAAAAACTGGATCCTCCCAGAGGTCTGGCTTCTCCAATACCACAGCCAACTG
CTTCGACCTCTCCAGTAACCATTTCCACTGCGAAAATTAAAACCCAATTCAAGAAGCTTA
ACAGAAGCAAGTCCACACAAAGACATTCCAACATCTATACACAGCCACTCTACCAACAGC
TACGCAAAAAATGTGGTAAGTCCACATAAACACATTCCAACACCTGATCCTGCGCCACTC
TAGCTACCTGGAACTATGCAAAAATGAGCTTGAACAGAGATCGTTGCACATGCGCACAGA
CATACGCGTGCACCTGAGAACGAACGGTAGGTGTTTGTCGATATGCCCGAAAGAAACAAG
CACATCAGATGCACACCCCAACCCTACAAATCAATAACACTCGACGCCCTGGTCGATTTC
GAGTACGGAAGACAGAGGGCAACAAGTGTCGTACAAGATTGGACCTTGAGACGCTTCTTA
ATAAGCCTGATGGACTGCGCGACGGCGGCGGCGTGGCTCCGCCAGTCGCTCTCGGCATCG
GCGAGGATCGTCCACCCCTTGTCGGCAATAGAGTCGACAGTCAGGCCGTCAACCGTCCTC
GGCGCCTCCACCACGGGCGCCGGCGAAGAGAACCACCGAGTCGGCTCCAGGAGGGGGCGT
GATCTGACGGTGGCAGGAACGCCATGAGTGGGTCCCAGGAGGGAGGACATGGCAGCTCCA
TGTGTGAGGAGGTGGTGGGTAGGATTCGGCGTCCTGGAGCGGAGGTGGGAGACGAGGACC
GCGGCCGTTGATCTGGTTAGGAGGCGGGAAGCCATTCCCGTCTACTCCGACGCTGGCTGC
GGGGAGGGCTCGACAAGTAGTGCTAGCTTGTATTTCCTGTTGGATGAACCGGAATAACGA
AAGACGTTTTCGCTGGCGGAAGGCGACTCTCTATGGAAAATGTTTTTTTCTTGGCCCAGC
CCTATTTTCGGCTGTTTTTAGAGAGAAGTTATGCCTCGAACCAAAGTCCTCTTCAACCGT
TGATCCGATTTTTTAAACTGTTTTTTGTGCTGATTTAGAAGTTTTGAATGCTTGCCAAGT
TTATCGTCGAATGACATTCATGTAAGTTTGTGACAAAAAAAACTCTACAAAATATCTAGT
GTAATGCCTTGAACCTGCAGGGTAAAAATGCACAATATGGGCAAGCATTTTTTTTGAAAG
AAATGTTTGCCTATAGTATGTACTCCCTCCATTCCTAAATATAAGTCTTTTAAGCGGTTT
TAATAGGTGTCTACATACGGAGCAAAATGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNTCCGTATGTAGTCTATTAGTGAAATCTCTACAAAGACNNNNATTTAGGAACGGAGGG
AGTACAAACGTTAGGGTAATGCCTATGCTAACTAACACAAGCGAGGTTCCTTATATCGAA
GCCATAAATAACAAAAGTGCAACACCGCATGCCAACGATGCTTGTGCAAGTTGGAAAGAG
TGAAGGACATGACGTATGGAGCTTATCAATTCCGTCATATGATCACTGGCAAGTAGACCA
GCCTCCGAGATTTCAACATTTATCGCGTGTGCACTTGGACTAGTCCTCTCACCTCACTTT
CACCTCCAGCAGGGTGATCCACTTCCCTCCACACTATTCGTCATGCTTATCGACGTGGTC
AACAATGTGTTGGGACGTGTCGCTGAAACCAGCGTGCCATGGCGCCTCACCCCACGCCAC
CTGACGTGCGCATGCGCCATAGTTGACGTGTTGCATACACGAGTTGAGCGTGTGTGACTA
TAAAGGATTTGTGTGTCCAACCTTGTTTGTGCACACTTGGATCGATGTCGGTGTCAAAAC
CGATAGACCTCGGGTAGGGGGGCTTGAGCTATTAGATCAGATCGATGGGTAACAGGAGAC
AAGGGACTCAGTGTTTTTACCCACGTTCAGGTCCTTTCGATGGAGGTAAAACCCTACTCT
TGCTCTTATTTGTATTATGGATGTATCAAAGTAAGAAGTGGATATACCTCGAGATCGTGA
GTTGTGGTCTAAACCCCTAACGATGATGATGAAAGAATCTATGCCTCTACGGACTAAACC
CTCCGGCTTATATAGGCGTCGGGGGTATGTCGGGTCATACATGGTCGGTTGCCATCTATG
AATGCATGTTGAATCTATCAACAATCTTGGAGTGCACGTTAGGTCCTCACAGAAGTCTCA
TGTCCCCATGCCATAAATTTGAGGCCTCTGGAGTACTTATGCTGGTAGTGGTTTTGGTAA
TTAATCACAACNNNNNNNNNNNNNNNNTAATGAGTTTATTCAAGTACATTTCAAAAAAAA
AACAAATATGCTTTGGCTATAGGATTGTGTGGAGATGCCCCTTTGATACAAGGAAGGAAT
AGGATTGGTTAAAGCTTCAAGCAAGAAGACTCTTCATTTTATACTTTGTGA
