Map Locations of contig_38762 (8122 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_38762

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_53941 2 4154 bp AK250148.1 Available Available None





CDS Structure of MLOC_53941






Contig Sequence (8122 bp)

>contig_38762 8122 assembly3_WGSMorex_rbca.fasta
TATGAACAGTAAAATCAAAAGAAATAGAAAACAAAATAAGAAAAATCTGAAACTTTGCAG
CATCAAAGATGATGAAATTTTGTATGTGTTTACAAGTTTTCATGCCAAAAAACTATTCGA
GGAGCTCTACACACGAAAAATATTTCAATGCTTGAAGTTTTGAGCACTTTTAGCACTGTA
ATCTGAAACTTGTTTGTACATCTTTCTCTACATGATATTTTGACATGAAAACTTGTAGGA
ACCTACAAAGTTTGATCATCGTTGATGCTGCAAAGTTTCAGATATTTTTGATTTTTTTTT
CTATTTTTTTTTACTGTTCATAGAGGGTGCCTTTTGTTTTCGTGGATTGGCTGACGGCTA
GAGTGAATTTGTTGCCGGCAGCGCCAGCTTCGAGCAGAATGCCGGCAGTGACAACCGGGC
GAAGGGTCTCTGCAAGATAGACCAGAGCACTGTGGTTCTCCACACAAGCCAAACGATGCC
CGCCATCATGGGGACCAAAGCTTCCGAGCCTGAGAGGCTGAGAACCACGCTGACGAGAAT
GGCGCAGACATCTATGAGCTTCACAGTGCCAAAGCTATGTCTAGAGCGCCCAGCCACGAG
CTCAAGCCATTCTAGAGTGCCTAATTAATTCGTGCATATTGCAGGGGGGAATTGGCATAT
AAGATAACCCAGTTTGCGTATTCGGGTTAAAAAAGAAACAAGGAAATTTGAAAATCCTTA
TAAGCTCTGTTTTGGGAGCTTATCTTCCTCAAGACATCTTGAGTCTAGAGGAGCTGCAGG
GTAGATATATTTTTAAGCTTACATACAAATTGGAAGAAAAGATGGACTATCAAAGATCCT
TCTCCAATAGCACCAACAAAGAGGGCTTGAAGAAAGCGATTGTCTAATCTCTACTTGGGC
AGAAATCCAATCTAGAAAAACCAAAGTTGAACAAATTTAGAATACATAGGGGGAAAAGGA
TGGAGATTTGAACTCCAGTTAAGTCAAACAAACCTTCACAAACAAACTTGGAGTTCTATT
GCAAGGTTGCTGTCTCTAATTTTCAAACTAGATATATGCACACACTATTACAGATAGGTA
CTACATAGACAAGAAAGGAAGGTGTCATACCTCAAGCAGATTGTGGCTGTGCTCAACTGC
CAGAGAAGCGATGGTGTAGCTGAATACAGGATCAGGCAACAACGTTATCTTGAAGACTCC
AAGGGCATGATGTTTATGAAGAACTCCTGTGTTGATCTCGGGTTTGCAGCTGTGTTTAAT
TACACTGGTCGGTTAAGGACCAGCTCATTGATTAAACGACTCGACCATTAGTTGCAGAAG
ATAAGTTTGTCAACTCAAATGAAGTATATGGACCAAGTGGCGAGTGATCAAAACTTGATA
CGAACCCCAAAAAACAATGTGTATGGGGGCGCCCCTCGATGTAAATGATTAACATAAACA
ATTCATTAGACATGTGACAGCGCCATAGTTACCGCTAACCACATGTGTGTGCAATTGTAC
ATACCGAATTTGTATGTCCTTTGGTTGCAGCTCGCTGCCATGCATCGGGCTCCCAGTGCA
AGACTGACCTGGATAGTTCTAAAGAGAGTTGGTCTCGTACGTTTCTGGTTCCACAAAGGA
AAAGATCAAATGTGTAAGCCAGTGCCAAAGTGAACACGAACAACTAACAAAACCAAGGAA
ATGTGCAATAAGAACATTCCCATCATTTCGTGCAGTGAAGGAAGCAAGCGCTCAGTAACA
CCCTTGTCTACCTGATACGTATATAATTTGACGGGTAATTCTGTGGACATTAAATGGGAG
GAAAAAATAGCTCATCACACAGCAAGATCAAAATGGAACTGAACAGATGAGATACCGTGT
CGAGATCTTTAACATTAGAAGAAGGGTATGGAAATGACTTGTTGAACTGCTCTGGGTACC
AAGTCCTTTAACATGCTATGATTAATCAAGGAAGAAAACTCATGTCTCAAAGATGTGCCA
TCACTGGACTCACCGAACTGAGCTGTAGAGGAAACAACGACTTAAGAACCATCAAGCAAT
TTCGGAGAATGTTATTCATTCGCTGCACCTCACAATCAGTAAGAGACTCAAGATTCACAT
AAAGTGTGGCCCATTTGGAATATTCATGCCCCGGTGGAAATTTTGAAATAAAATTCGACC
AATAAAATTTTAACATAGATCAAATCAGAAACACAAAATCAGTAAGAGACTCAAGATTCA
CATAAAGTGTGGCCCATTTGGAATATCCATGCCCAGGTGGAAATTTTGTCACAAAATTCG
ACCAATAAAATTTTAACATAGATCAAATCAGAAACACAAAAGTTCTATTTTGGAGGAAAT
CTGGTAGGTGGACATCTGAATTGCAGACTTTCACAACATGGCACACAGAGCGCACCAATC
AGTCCCGAAAGGTGGTGTGTTTTGTTCGTGATTTTCATCACTGTCCATCCAAATTCAAAA
CAATGCATACAAGAAAATATAGATAGTAAACAACAGAATCAAGAACAAAAACAAGAGCGG
ACGAGATATCTAAAGAAGTTTGAAGGTATTCGCAAAAATTACACACTTAAGAAAAGAGGA
TGCAAAAATGACAATCAAAAGCTGTTCAATGTTTAATTTGGCCTTAGAATTGCAGAATGA
CAGCATGGGCGCACAGCGACCAATCAGTTCCCAAAGATGGTATGATTATTAGGTTTTTCA
TCACCGGAAAAACATAAACAGAGATATAGATACACAAACATCCAGGTTGCTACAGAATTG
TAGATTTGGCAGCATGGCACACGAAGCACACCAATCAGTCTTGAAAGATGTGTGTTTTGT
TCGCGTGTTTCATCATTGTCCAACCAAGTAACTAAACAATATGGAGGAAAAACATACTCG
CTCCGTCCGAAATTACTTGACGCAAAAGTAAATAAAAAAATATATTAGAACTAAAAAACA
TTTAGATACATCAATTCCTTGGACAAGTATTTCCGGACAGAGGGAGTAGTAACAAGAGCT
TCAAGAACAAAAAGAAAAGGCAGACAATAAACAACGAAAGACAGAAGAGGGAAGACACTA
AACAGTGAGCTCCTCATATAGACATCCATGCATGACAAGGGAGGCTCTTTTCTCCCTTTA
TTACTTTTCTTTCTTTAAACTAACCCTCTCAGTCGATCTCCCTAATCTAGCTATCCTCAG
TCAGTGCCTGTGCGGTGCATGCCTCCACACAAATCACAAAGCTACGTAGGCGACAGGCAA
CCACCTAATCATGAATCATCCCGGGAGCAAAGCACAAGCAACACATATGCGCACAAGGAT
CAAGCCTGGCAGGGCGAAAGCTCACATGCGGCAACTGCGAATGTTTTGATAAACAAGCCT
TAAATTAGTCATCACCCGGGGCATGCATTGAATTAAAACCAAATACAACAAAAGGAAATG
TATGTCCAGCATTGCATCAGACATCCAAGGAAGGATCTGAGGTATATGCTCTTGGGCGCA
ACTGCATATGTTTTAAGAAACGTTCCTTGATTTTATCATCATTTGCAATGCAGCAGCATA
ACTAACATACTGGAGTATATTTAAAGTGCTGAAACTCATTCAGAAACACAACATCGACCA
GGAGAAATAACAAGAACCGGACATCTAAGGCTAACTGCAAATGTTTCAAGAAAACAAACA
AAAAAAAGTAGTCATAAAATTACCAAGTCGGCACTGGCATCAGGACAGAACAAAGTAAAC
AGATCACTTCCGAATATGGTGTGGGACTCAAAGCACTCAAAATGAGCCTAATATTATGGA
AATCTGAAAGTTTGGAAATAAGCCCTATAAACCCAAAAAGAGAAGTAGAAGAAAACGAAT
GATTAACACTCACTCTTCCACGCATAGAGAAAATGGTAGTGCCCAAAAGCTCCAGATGAT
TTAGAATAATATATTACTTAGACGTGACAACACTGATGTTCCACGAACGTTTACTCGCAC
GGCATAACCCCGACCACTCAAGACAAAACAATAACCACCACAACCAAGTCTCAGATAACG
ATAGGACACGACATAATAACTAAGCAGCAGGCTTTGCCTGCCTCTGCAACAGAATCGACT
TGTTTAGTCAACCTCCTCAATCTTGGGGCCAGCGCCGCCAGAAGCAGCCGGGGTGTCGTC
GTCCATGCCGCCCTCCATGTCGGCACCAGCACCCTGGTACATCTTAGCAATGATGGGGTT
GCACAGGGCCTCCAGCTCCTTCATCTTGTCCTCAAACTCGTCCGCCTCAGCAAGCTGGTT
CGCGTCCAGCCACTGAATGGCAGCATCGATGGCCTCCTCGATCTTCTTCTTGTCGTCGGC
CGGCAGCTTGGAGGCGATCTTCTCATCCTTGATTGTGTTGCGCATGTTGTAAGAGTAGTT
CTCCAGGGCGTTCTTGGACTCCACCTTCTTCTTGTGCTCCTCGTCCTCAGATTTGTACTT
CTCAGCCTCCTGGACCATCTTCTCAATCTCCTCCTTGCTCAGCCTGCCCTTGTCATTGGT
GATGGTGATCTTGTTCTTCTGCCCGGTGGTCTTGTCCTCAGCAGACACGTTCAGGATGCC
ATTGGCATCAATGTCAAAGCAGACCGTGATCTGGGGAACTCCCCTCGGTGCAGGAGGGAT
GCCGGACAGCTCGAACTTGCCTAGGAGGTTGTTGTCACGGGTCCTGGTCCTCTCACCCTC
GTACACCTGGATGAGCACACCAGGCTGGTTGTCCGAGTAGGTGGAGAAGACCTGCTCCTT
CTTGGTGGGGATGGTGGTGTTCCTTGGGATCAAGACCGTCATCACACCCCCGGCTGTCTC
CAGACCAAGGGAAAGAGGAGTGACATCCAACAGCAGCAGGTCCTGGACCTTCTCGTTGCC
CTCTCCGCTCAAGATGGCAGCCTGGACAGCAGCTCCGTAGGCAACAGCCTCATCAGGGTT
GATGCTCTTGCAGAGCTCCTTGCCGTTGAAGAAGTCCTGCAGAAGCTGCTGCACTCTAGG
AATCCTAGTGGAACCTCCAACAAGGACAACATCATGCACGGTGCTCTTGTCCATCTTTGC
ATCCCTCAGACACTTCTCCACAGGCTCCATACACTTCCTGAAGAGATCCATGTTCATCTC
CTCAAACCTGGCACGGGTGATGGTGGAGTAGAAGTCTATGCCCTCAAACAGCGAGTCAAT
CTCGATGGTGGTCTGGGCAGTGGAGGAGAGAGTTCTTTTTGCCCTCTCACAGGATGTCCT
CAGCCTCCGAAGAGCTCTTGGGTTGCCACTGATGTCCTTCTTGTTCTTCCTCTTAAACTC
CTGGACAAAGTGGTTGACCATCCTGTTGTCAAAGTCCTCACCACCAAGATGAGTGTCACC
AGCTGTGGCCTTGACCTCAAAGATACCCTCCTCAATGGTGAGAAGAGACACATCAAAGGT
ACCACCTCCAAGGTCAAAGATGAGGACATTCTTCTCACCAACACTGGAAGCCTTCTTGTC
AAGACCATAAGCAATGGCAGCAGCTGTTGGCTCGTTGATGATACGGAGGACATTGATGCC
AGCAATGACACCAGCATCCTTGGTAGCCTGCCTCTGAGAATCATTGAAGTATGCAGGTAC
AGTGACAACAGCATTCTTCACAGTGGTGCCAAGGAAAGCTTCTGCAATCTCACGCATCTT
AATGAGGACCATAGAAGAGATCTCCTCAGCTGCAAACTGCTTCTCCTCACCCTTGTACTG
GACATTGATCATGGGTTTGTCACCAGGTCCAGCAACAACCTTGAATGGCCACAGCTTAAT
ATCACTCTGGACAGTAGAATCGGTGAATCTCCGGCCAATGAGACGCTTGGCATCTGCACA
AAAGTTAGTGTCAGAAATTGCATAAACACCAAACAAAAAAGTTAACAACAACCATTACAT
GAATAGCTCAATCTCATACTACTTACTTAAACTGAGGCAAAGCAGACAACAAATGATTAA
GGGAGAAAACATGCCACACATATTTAGGCTAAAATAAAAGCAGATGTATTAAGAGGACCC
TATCCAATAATAATCCATCATAAGCAAAGTTATGTAAATGGGTATATAGTAACTAGAAGC
TCATTACGAGCAGCCAGTGTCGCAAAGTTCCATTCCCCCTCATTTTCTGCCATGTTTTGA
GACACAGAATCACAAAAATTGACCAGGTGTCAGATACCAAATGGCATTTAGTAATGGACA
ATGCATTAAACAAAGCAAAAAAAAAAAAAACTGGCATGCAATAACAGCCGAAAGATGGTG
ATCTTGTTTATAATAATCACAGTGATTCAGCAAATGGGATTGTTTGCATCACAGATTGCA
AGGCAACAAAACAGGTTCATCACTGAATTCAAAAATTGTGATCACATGAAACAAATCAAC
TATACAAAAAGCAATTGGAGATCAGATGGTAGTGCATGTTGTAAATTGATCATCACAGTG
AATGCAGAAATGTGGTATGGTTATGATATCATCACTTCTCCAACCAAGTCATATATGACA
AACAAACACCAGACAACAAGGATAATCTGCTATGAACCATCCAACAAGTACCAAAAAAAA
TGGAAGATTGAGCCGCAGATTGTTCAGATTGAAAACCATGAAAGCTATGCGCACATTTAG
CTTGCTGCCCAATTTTGTCACATCTACAATTAAAGGGGCAAAAAAGGAGCAAATCAAAGG
AATTCGCCCCAATTCCGCTTCACAAAACTTGGTAGCAAGCTTGTAGGCCCAAAGCCATCC
ATCATAAATTCAGCAGAGAAGCGCTTGGATATTATTTCATCATCAATCTGCTAGCTCCAA
AATAAAATAGGAACGCCAACAGAACCTAATTCAAAAGATGATGCCACACAAATTGGCAGA
GAGCAACATGCAGTTTAGAAGAATGATAATCAATGGAGTGTGCACTGCACAGTGAACAAC
AAGCATATCAACAACTAATTGGGATCTCATAAACAATAGTTGCAATCCACAGTCCCCTAG
TAGTACTTCCCAACATAATAATTAATTCAATACTACATTGTGTTAAAATGTACCGCAACT
ACTATGAACTAAGAGGACGTAAGGCATAACTCGAAACAGCAAGGGACAAAACAGCATGAA
CAATGTAGATTCATGCTAAACCAATTGCGCTTGGCAAGACAAAGCAATCAAGCTCTATAA
CAACATTAATAATATAGATCTAACATGTACCAACTGAGTCACATGTCAATGAAGTGTTAA
ACAACTCATAGTCCAGATCAACTATAAACAAATGGATCCAAGTGGGACCAAACAATTAAC
AAGATCCAACTGCAGACAGTCATATATACTAATACCGACAGATCTGACACCTCAATACCA
ACCAGCTGACAGGACAGCAGCCACCTCTAGTAACTAACCGATGCCAGCACAAAAATCTCT
ACGGCTACGAGCACGGATCTAAGCGGCCAGGACCAATGATATATCAAACACACTAGAACA
GATCTGAGCGTGCGAGGAATGCAGAAGCAATGAGGTGGGCGCTCACCGAAGACCGTGTTG
ATGGGGTTCATCGCCACCTGGTTCTTGGCGGCGTCGCCGATGAGGCGCTCCGAGTCGGTG
AAGGCGACGTACGACGGCGTGGTGCGGTTGCCCTGGTCATTGGCGATGATCTCGACCCTG
TCGTGCTGCCACACGCCGACGCACGAGTAGGTCGTGCCGAGGTCGATGCCGATGGCCGGC
CCGTCGCCCTTCGCCGCCATCTCTCTCGCGCGCTCCGGGGAAGCTCGAAGCTATCTGGCT
AGGGTTTTTCTTCCGGTGGAGGGCGGAGCGGCGGCGGGCTGAGGAGCGGGGTGGGGAAGA
GGACTAGGGTTTGAAGAGGGGGGAATTTTGGAGGGGGAACCGGGGATTTTATGGTGCGGC
GGAAGAGGGCTCGTGAAGCTCTAGAAGGTTCCTGGGCTGCGGGTCGGGATCGTTGAGGCG
TCCAGATCTGATCCTGCGGATGATGGCGCACCGGGCGGATGCCCTTTTGGTTTGGGATGT
TTATTATTTTCTTACTTAGGCCCTGTTTGGAACCATCNNNATTATATAATCTGGTTTTTA
TAATCTATTGTATTTTCAAACAGGACAGTTTATATTGTAGATTTTATAAACTAGATGACC
AGATTATTATAATCTCATAATC