| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
 |
No map location | No map location |
Predicted Genes from contig_38752
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_53930 |
1 |
1665 bp |
MLOC_53930.1 |
Available |
Available |
LOC_Os01g50200.1, FRAME:-1, EVALUE:0.0, 13101.m05225 protein UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed |
| MLOC_54083 |
6 |
1482 bp |
MLOC_54083.4 |
Available |
Available |
LOC_Os08g32930.1, FRAME:+2, EVALUE:6e-70, 13108.m03423 protein expressed protein |
| MLOC_53997 |
2 |
2144 bp |
MLOC_53997.2 |
Available |
Available |
LOC_Os03g19930.1, FRAME:+2, EVALUE:0.0, 13103.m02388 protein adenylosuccinate lyase, putative, expressed |
| MLOC_53969 |
13 |
3463 bp |
MLOC_53969.5 |
Available |
Available |
LOC_Os04g53994.1, FRAME:-3, EVALUE:0.0, 13104.m05577 protein kinase, putative, expressed |
CDS Structure of MLOC_53930
CDS Structure of MLOC_54083
CDS Structure of MLOC_53997
CDS Structure of MLOC_53969
Contig Sequence (5714 bp)
>contig_38752 5714 assembly3_WGSMorex_rbca.fasta
GATGACTTGAGCAGTGTTTTGCAAACAGGTGGGTTACGAGCTGAATACAATTGTAAAGTG
AAACCGGGTGTGAAGTTTACAACGTCAAAACGATGTCCCAAGTAGATCGCTCGCTTTTTC
TTACAGTTGTATGTTTTACGCATGTAATCCGTTGGAAAACGGCAGTCCAAGCACGGCCTT
ACACTTTGACTTTTTTTAGAAAAGGCAATTTTATGATCAAAATAGTGTAAACAATGACCT
ATAATAATAAATATTTTTTGTCTTTTTTACCCCGAAATCAATGTTGATTTTTTTCTAAAA
GTTTATATGCTAGTACAAAACAAAGTTAAATTTAATCTAAAAATGCTTCAAAACTATTCT
GATTTAATTAATTATTAAAAAAATTCTCAAACGGAAAATGTTACTTGGCAAACGTTTGGA
GGGAGTTCCCAGTGAACGTGCCAACGGCCATCGGAAAACACTAATCTTGAAGCAGACCAA
GTTGACATAGTCGGTCGAAACCAAGCGATCGCTGGGTATGCTTCCTCGCGAACGTACTCA
TTCATAGGACCATATCCTCTCACCATCACACCGCCACTATTAGGAAAACTTATAGATAGA
CATTTACTAGTAGTGCGGATTTATAACCCTCGCTAGTGCTACTTAGTAGTAGCGTATGTT
TATACACCTCGCTACTACTAAGTTGACAATAGTAGCGTAAGTTTATATCCCTCGCTACTA
CCAAGTAGTCTCTACCATGCTTTCCGAGACATGCCATAGTAGTAGCAAGTGGTATAACAC
ACACGCTACTACTAAGTTGATAGTAGTAGTTTATACCCCTCGCTACTACTAAGTATAAGG
TAGGTGAATGTCCCATATCCTCGGCCGAATCCCTCCTCTTTCCCTCACTCTCCCCTCTCT
TCATAGGCTCTTCCATCGTGCTCCTGTCCAAGCACACCTCCTCCTTCATGGTGCCGAACG
AAGCCGCCTCCTCGCATCGCTGGCGTCCAGGAGCTCGTCCGTCTTCCCCCTCGCCTCCAT
GCCACCACGACGGAGCACCTCACCACCGATGACTAGCCCCGATGCGCCCTCCATCTCCTT
CCTCTCTCCCTTGTTTATGTTTTCCCTCTCCCTTCTTTCTCCGATTTTACTCACCTCCCA
TGCCCATGCATGCGCAGGTCGTCGACATGACCAACCATGAGCTCTCTACCTTGACCGCGA
AGAGGATCCTCGCACTATCGTCTTGCTCTGCCCTGGATTCGGTCCCTCTCCAACAGCCGT
CACCGAATCTGGTCTCCCGCTGCCCGTCCGCACCTCTGGTGACCCCTGTCGTTGCTGCAT
CGAACCATTGACACAACACACGGGATTGAGATTTTTTTTTTCATTTGTGAAACTAATAGT
AGTAGCGCGGGTTCTAAAAGCTTGCTACTGTTATTGCACGTTAGTAGTAGCGCGTGTTAT
AAAAGTTAGTTGTAGCGTCATAGCAATAGCGTAGGCACCCGCGCTACTGCTACAGGGAAA
ACCCGCGCTACTGCTAGGCTTTTTCCTAGTAGTGCGCCCTGCAGCTATGTTCCTATTTGG
ACATCCAATTTCCCCCTTCTCGTCGGCGACCACGATACAGGAAATGGTGGCACAGACCTC
GCGCGCAGCAGGAGGCGACGATGGCGTGGCACTATATCCTTTGGGAGTGGCTCTAGTGAG
GTAACTTGACTAGGATGCAGTTATGGCGACGCATCCTCATCGGCGGTGCCCGCGAGCTGG
TTTGCTCGATCTAGCACGCGCGATGAGAAGTCGGCGATGGCGTAGGTCCAACAAGGTCGT
CATGTTGGTCCATGGGGAGCTCGAGCAGGAGGAAGAGGGGTGGCTTTCATGGGGATCTCA
AGCAAGAGGAAGAGGCGAGGAAGGAGAGGGAAAAACAAGGAGGCACTGTCTACTCCGGCT
TTCTCCCATTGCAGGGAGGAGAAGAGGTTGTCGAGAGGCTTTTCCCGGCGGGGAGATGCA
GTTTGTCGGGTTCGGCAACCACTACGTCTTGGTCATCTGCAAGGTACTAAGTTTTTGTGA
GGTTCCCATCAGCGGGGAGATGCTCCTTTTTGCCAATTTGTTTTTGATTGACCTCAAGTA
ATCCACACACACTAGATTCTATCAAGTTTTTGAGTACTGAAGGCTAATGCATCATCCCAT
CTAGTTTTTGTTATGAAATTCATGGAAAAAAATCACTCTACTATGACACATTTCAGTTTG
TGTCGCGGCAAAAAAAAAATCGTTCTTACCATGCCAGTTTTATTTTTGATTCCATGGCAA
ATTTACTCTACTATAGTATTCTCAGTCCGTATCATGGCCTTTTCATCTTGTAGTTGCATA
TCATGGCAACAGTTATTTGAACAAATGAATGGCGAATCTAACATTTTTTCCTGACATGCA
CATCAATGTTTTGTCCCCTTGCGGATTGTCCATCGGGTTAAATTTGAAATGCACCACATC
TATCAGTTTACCGTCAAAGCTATCCATTGTCTGACCTCCTATAGACTCATGGGGTAAGAT
AGCCAATATGAGAAGAATCTGATAGGGTTCTGGACCAGTGAATTTTTTTTTTGGACAAAA
TATTAGCATATGGGAAGCTTGGAGTGGCATGTATGAAAAATTTCTCTATTATTGCATATT
ACAGAATTGAAGAAACTAAAATCACACCTTAAAGACATAAGGCTCACTCCTTATTTCCAC
GATGAATTAATTATAAATGATGCTGCACACATCAAGCATGAATCCACGCATCCACAAGCC
CCGCCAACGTCGCCTCAGATTCTCCACCCTCGAGCAGAGCCTCTTTCGCCCGCCGCATCA
CCGCTAGAGTCCGTTCCCGGAGCACCCTCCCGCCTTCCGAATCCATCATCCACCTCACCT
TCTTGGCAACCTCCTCGGCCTCCACCACCTCCTTGTCATACCCTTTCATTGTGACGGCCA
GCTCCATCTCCTTCTCGAGGAACACCGCATTCAGCCTCTGCTCCGCGTATAACGGCCACG
CCACCATTGGCACGCCAACCATGATAGACTCGAGCACAGAGTTCCACCCGCAGTGCGTCA
CGAAGCAACCCACGGCATGGTGTGCTAGCACGTCACCCTGTGGTGCCCATGACTTCACGA
CGAGGCCCCTGCCCTTGGTTCGGTCGAGGAAGCCTTGTGGAAGCAGCATATCCAGGTCCG
GCTCTGTCGTCGTCGTCGTCGTGTCGTCGCCGCCTGGCGGGCTACGGACGACCCAGAGGA
ACCTCTGTCCACTGGCCTCCAGTCCAGTGGCCACCTCCATTGTCTGCCTGGCGCTGAACC
GGCCTAGACTGCCAAAGCACAGGAACACCACGCTGGCCTTGGGCTGTGCGTCCAGCCACG
CGAGGCACTCGTGGCCGCGCTTCACGCCCACCTCCTCCGACTTGATCAGTGGCCCGATGC
AGTAGACCGGTGGCGTCGAGAGGCCGGCTGGGGCGGAGAGCCCGGCGAGGATGGTGTCCA
TGGCGCGGGGCTCCAGCGAGCGGAAGGTGTTGACGATGATGCCCTGTGATCGGAACAGGT
TGAGGCTCACGTTTAGTAACGCATTGTAGGTCGCGCCGTCGCGATCCATGAGCGGCTGGA
TGGAGTGCGTCGCCGGGAAGGAGGTGATCCCTGGGACGTGCACGAGTTCTTGGCCCATTT
CCCGGAAGCTCCTCGTGCTTTTACCATGCAGAACCCGGAGGTGGAGAAAGAAAGCCAGGA
TCTGGGCGCCGGAGGTGTTGAAGAAGTAGGCGGGTATGCCGAGCTCCTTGGCCACGTCCA
TGGCGGCGCTGCAGAAGAGGTCCAACACGAGGACCTCCGGGGAGGCGCCGGCGAGGAAGT
CGTGTAGGTGCGGGTTGGAGAGGCGGGCGACCGCTAAGGCTGGCATCATGGAGTGGTCGG
AGTCGAGGAGCTTGACCTTGGGTAGACGGTGGAAAGTGATGGAGGGGTTGGCCGCGGAGA
CGCCGGCGAGGAAGGGGCCCGTGGCGCCGGTGTCGTACGGCGGGTCCATGAGGACGACCG
TGACGGATAGTCCGCGAGCAGCGAAGAGCTTGGCGAGCTCGATCATGGAGACGAGATGCC
CAATGAGCGGGGACGAGTAGAGCATCACCCGCGGCTTCCGGGCACTGATCGTCATGGTGC
CGTCCATGTCGACAAAAAAGAACTTTGGTTCCTGATCCTGATCGGTAGTGTGGCTAGCTT
GTGGAGTGTACGTTGGTTTGTGTTTGGAATGTCACGAGGGAGTTGGATGACAAGTGATTG
ATGAAGATGACCAAGAGGAACCTGACATTTATAGAGGCCCAACATGGATAGCAACCGTGT
TTGTACTTGCATCCCTCACTCCAACATGGATGGCAACGAACCTTCTCAGGCGCTTCAACG
AACCTTCTAGATGCTCACTTTATGTGTATATGGAGATCATCCGATGAATCGAGTTAGGCA
CATATATTATGATGCTACAAAAGGGCAACGTCATCAATGACGAACGGAATCAGGCTTTAC
GCCCGGACGTATCTGCTAACGTCCCATGAGGAGGTCAGTTCAACACTGAAGCCGAATACT
AATTATTAGTAATCACCTGCTGCTACCTTTGCTAATTAGTACTCCCTCCGTTCCTAAATA
TAAGTCTTTCTAAGGGTTTCATTAATGGACTATATACGGATATATATGGACATACTTTAG
AGTATAGATTCANTCATTTTGCTCCGTATGTAGACACCCAGTGAAATATCTTAAAAGACT
TATATTTAGATACGGAGGGAGTATTAACGTTCCATGAGGAGATCACTTCAACGAATGGAG
TAGTGCTGTCCAAGAAAATATTATGGAGTAGCAGCGGGCCGGTGAACGTACGCCATCGCT
TGTGTGTTAGCAGCAGTACGTTTTCTATTTAGATGGAAAATAACAGTAGTACTTTTTTTG
TTTGTTATGAAAGACCTGTTTTGATCGACAACCATACTTAATCATTTCTCGCAAAAAAAA
TCAATACTTAATCAAAATTAGCAAAATAGCTTGTGCGTTGTAACATGAGAAAAAATAACA
CACGCTCTAAACCCAATAACCATGACTCAAGATCACAATAGGTTTATGTCCTTTATTTTA
GCGGGGTATCAAATTTGTGTTGCCGTTTATCCTCCTTCTCAACCTTGTCGACGATGGTCT
CAGTATTCGCATAAACCAGAACGTGTTTGAATATGGTCAATCTTAAGACGTCTCTTTCTT
TCACTTCCTCTGAGAAAGCTGTTATTTTTTGGTGCAAGGTTTTTAGAGGTGTGCATATGT
GATTATCGATGTTTTCTTTCCTCTTTATATGTTTTTAGTAGGTGTTTATTTGCAACCCGG
ATCACCGTCAGTACAAAAGTAAAACAAACCATGGGCTATACATTATAAGATTGCTTACAT
AATAATATTTAAAAATATTTAACAGGTAAAAATAATATCACATTCCGATCCTACACTTTT
TTTGTAACCAAATTTCCTATATAACATAAATATGACCCGCGGGTGAATTATCTGAAAAAT
CGGTGGGGTTTATAAAAAAATGCTAAAAACAGTTTGGCTGTGACTTAACTGTGTACTGCA
TGGTAGTTCATAGGAATTGAGCTTTTATTTTTTGCAAAATTATCTGACGAACGAGAGAAG
CACTCCGTACTTTACTAATAGGTATAGATAATATTTGTGATATATTCCTTTTTTTTGGGG
GGGGGGGGGGACAA
