morexGenes - Barley RNA-seq Database

Contig contig_38699
Source Contig contig_38699
Contig Data
|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|
morexGenes
Links
Map Locations of contig_38699 (7526 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
	No map location
Predicted Genes from contig_38699

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_53864	3	2013 bp	AK357013	Available	Available	None
CDS Structure of MLOC_53864

Contig Sequence (7526 bp)

>contig_38699 7526 assembly3_WGSMorex_rbca.fasta
AATAACTGTCTTAAGCTTAGTATAACTTTGTATTAGAGCTAATACAAAGTCAAGACAGTT
ATTTTGGGACGGAGGGAGTACGTATTTGATTCCTTTGGAACATGAGTGTACTTGTCACTA
GTTTATTTTGCTTGAACGGTTCGGACCTTATTTTTGTCCCAGGCCATATATGTTGAGCTG
AAAAATGGAACTAGCAGAAGAAAAGGTTCGCACCTTGAGAACGGTACACGCTTGATTTCT
ATCGATTGCAACTTGCTTTCGCGGAAAAAAATGATTATAACGTGTACATTCACATGATAT
ATACTCCCTTCATTTTAAAATATAATTTTTTTTTGCCTAAAAAACTGTATGCAAAGTAAA
ATGAGTGAAGTAATTTTTTTAAAATACGTTCCTGATAACGCCCACATGTGTGTGGGCGTT
AAGGGATGTTGCCCACATGTCGTATGTGGTGTGTAAAGAAAACAGTTCACACGCCTGCGT
GTGGGCAAAACAACTAACGCCCACACGTCCGGCTTCCTGCCTCGCCACCCGCACATCCGG
CCTGCAACCTCGCGGTCCCGTATGCCCCCGCGTGACAGTTCCACTCAATTGTCATGTAAC
ACTCGGAAGACATGGAAATTGACAAGCATGCGGGCACGACCAGTTTCACTGAGTTGTCAT
ATAACACCGTTAAGACATGACAACTCACAAGCATGCTGGCACGGCAGTTTCACTGAGTTT
CCATGGAAAGGACATGATAACTGACAGGCATACGGGCATGAGAGTTCCACTCAATTGTCA
TGGCGAAAAAATGGCAACTGTCAGGCATGCAGACACGACAATTTCACTCAGTTGCCATGG
AAAAGACATGACAACTGATAGACATGCGAGCACACCAATTTCACTCAGTTACCATGTAAC
ACTGAGAAACATGACAACTAACACGCATGCGGCCGTGTGGGTACGGCGTCAGTTTTACCA
CAAGTCGGGTTGGCAGCCGTGTGTGGGCGTGCATAAAACAGATGTGTGGACGAACTCCTT
AACGCCCACACACCAGCCCCTTTCTGCGTGACACAAAAAAACTGTTAAAAAATGACAAGG
TTAGTGCAAACCATAAACGAACGTAGATGTGGACGGTTTGCAAATGTCTATATGTATGGG
TGTTATCTTTTCTCTTAAAAAATATATATTTTGTAATTTCTTAGTGAAATCTTTAAAAAA
ATTAAGACCGAAGAAAGTACGAAAAGAAAGGAATCGCACTGCAAGTACAGAAGACCAATT
ATGGGATTATCGTCTCCGGCCATCACAGGCTATCAGTTCACAATTCAGAGTTGAGCCACT
AGCTAATTGTTCGTTTATTAACCACCAGTGCCGGTACTAATTAAATTATTATTTTTTAAA
TAAATTTATATATTTGATTTTTTAAGAAATCCATTTATTTATTTTTCGATATATGTAATT
GTGTTGACATATCTGACAAACGTTCGTCACAGGAGATGGCAGGTTCAATGTATTTGAAGA
ATATGGGTGCCTTTTTTGCAAAACTGCCATGCAATCTTTAGTTTTGAATGTAAGAGCATC
TCTAACAGGCCACGTATAATAGTTGAAACTATAAAATTTCAGCGACTATACAGGTTTGGG
TTGTTTTTTCTGCCAGAGCAGGTCGTCGAAGGGAGGAGGAGATTGACATTATGCTCTATG
AGCAGGGTGTCACGTCGGCCCTCGCCTTTGGTCAGAAGGTGGAAGAGTGGTGCCGCGAAG
CTACATGTGTTTCGCATTTACTACCGTTCAATTTTGCGTAGTGCGATAGGATAGCTAGTA
GCTCCGGTGAGCTCCAATAGGATAGCTTACCTCTACCCATGTAGTAAGTATGATTGTCTA
TTATGTATGAACTACGAACGAAGTGTGGTATGTTATTTTGTCCGCGAATGCTTTTTTAAA
AAATTATGCAGTTTGATTATACGGGGTCTGTTTCTACAGCGCAACATTTCGCCCCGCAAA
ACCCCAGATCATCTAACTGAAAAACATGTTTGCAGGTCGTAATTATGCATAGTCTGTTAG
AGATGCTCTAAGAAGGTCATTCAAACACCAACCTGCACGGTAGGATCAAAATCGTGGGGG
CAGTTGGGACGTTCACTGGCAGTTCCTACCCGGCTAACGCGCACTAGTTACTAATTCCGA
CATACAGTATAATTAATCAAGGCTAATGACAATATTATTTCCTCGGAAATACTCTACAAA
GCATCTTTCGGTAGCCATTCATATCCAAATCCGAGGGTCGGCGTCACGTTTATTCTTTTC
TTTTTGAAGCCCGTAGCGGTCGACACGATAACTCAGGATTCCCGTCAATCGTATCAGACA
TATATACATGTTGATTGCTGGACAAGAGCAGCTAGCATACCACCAAGATACGAGACGTGC
CCGGAGAGTAGGAGTATATATTAGTTAGTATCATCGTAGAGCTTTCGCCGCCTTTATTCC
TCGAGCAGACAGTGGTGTCGCGTTACAGGTTACACTGCACGTCGATCATAACTCGTATAC
GAGACCAACACAGACGTTAAGACGTGACACGTCTGTACACCACATGCTCCGACGCCCCTA
GTTGGACGGCACGTACGGCGCGCTTGCAGGACGTGTTGTTGCAACTCGTGAGTGTAGATT
CTTAGTACAACCGTAACCACCCACACAAGAGCGCATGCAATGCATGTAAACGTCAACAGC
GGCCGCATGCAGCCGATTTGATTTTTCTACCTCCAAATCCAAATCCATATCCCGAGAGAG
GAGCGCGACGCCTGCCACTTTCGGACCGGCCGCCCATGCCCACACCACGCATGCACGACA
CGACGAGAGGAGAGGAGAGGAGAGCCACGGCCGGCCGCAGCGATGGAGGACCGAGATCGA
TCACGTTGGTTCGATGCTCCGTGGCAAGCGGCCAAGAGGGACGCTCCGGTTCCCAGCCGC
CCGGATCCTTCTTTTCTTCCGCGCCGCGCACGGGTGGCATAATCCCCGACCCCCCACCGC
ATCACGCGATCCCTTCCACCCCTCATCGCCCTTGTGGCCGGGGCGCTGTCGATCGTCGCG
TCGACATATACGGCCGGTCGCCGTCGCACCGTCCGTATCTATCGGCCCGTGCTCTGCCAT
GGCCTGACTCCATGTACCCTACCTACACACAATTATACTCGTACATACCTGCCTGTCTGC
TTGCTAACTACCCGAGTGCTTACTCCAGGTAAGGTAAGGTAAGGTAAGGTAAGGTAAGAT
ACCGGCACTAACACTGTGAAAGGCGTGCGTGAGATAGCAGAAGTGGAGGCAGCGCAGCGC
ATGTGTGAACCCGCTCTGTGTTTTGCGTGGGCTCTCTCCTCTCCTCTCCTCTCCCTGCCG
GTGCCGGTGCCGGTGCTGGGCGGTGGTGTATATAACCAGTCGTCAAGCACAAGAATCATC
CTAGTTCCTTTCTCTCTGCTTCATCAAGCAAGCGAGCGACCCACCGCTACTCTGCTCGGG
ACAACGGAAAAGAGAAGATGGCCGTCTCAGTCTGCCTCGGCTCATCCCCATCCACTCCTC
TGCTGCCGCCGCTCCTCTTCCTCTTCTTCCTCTTCTGCTCCCTCCCGTCGCTCGCCTCCG
CCTGCGACCGCTGCGCGCACCACTCCAAGGCCGCCTTCTACACCTCCTCGCTCACCCTCG
CCGGTACGTGCCCCCACCCATCGACCTGCTCTGCCTCTGGTTTCTGCCTGCGTCTTGTTG
TGTGTTGTTCCGGTTGCGCAGGAGGTGGTGCGCTGGGTTCTGATTTTGTTTGCCTTGTGC
GTGCAGCCGGCTCCTGCGGGTATGGCACGGCGGCCGCCTCCTTCAACGGCGGCTTGCTCG
CCGCCGCCGGCACGGCCCTGTACCGCGGCGGCGTCGGCTGCGGCGCGTGCTTCCAGGTAT
GCCCAACGCCTTTGGATAGGGATTGTCTTCTTGATTCTGCATCTTGGGCATCGGCCTTGC
CCAAGAACTGGGCTGAGCTACCTCTATTCCTTGGCTAATCCGGTGAGCTGATCGCAGGTG
AGGTGCAAGGACAAGAAGCTCTGCAGCGGTGCCGGCGCCAGGGTGGTCGTGACGGACCGC
GCGAGGACGAGGACGAACCGCACGGACCTTGTGCTGAGCAGCCCGGCGTTCGCCGCCATG
GCCCGCCCCGGCATGGCCGCGCGGCTCACCAAGCTCAGCGCCGTCGACGTCGAGTACAAG
AGGTAACACAATAACAGTAACACCACCTCTAATTAAGCTCTCCCTCCTTTTTCACTTTTC
ACCTACCGCGCCATCTGCCATTTTTTTTACACCTTTCAACGCTGCACGTAATAATAGCAG
TAGTACGTAGGAGCAAGAGAAACGAGCCAAAATAGTCTCCACCGAACGTGCCGCCATAAG
TATACAACACAGGACACGATTTGTCCTTGCAGTAGTACGAAGGCTTGGAAGCAGCTCAAA
ATTGTCGGTGTTGATAATATAATACGCATGTGGTGCAGGGTGCCGTGCGAGTACAAGGGC
AAGAACCTCTCGCTGCGTGTGGAGGAGCGGAGCCGCGCGCCGAACAAGCTCGCCGTCCGG
TTCCTCTACCAGGGCGGCCAGACCGACATCGTCGCCGTCGACGTCGCGAAGGTAAGCAAC
GATCCATCCCTCCCTCCCTCGTCCTCCCCAAGGGCCGCCACTGTCGCGTTCGTTTGTGAC
TGAAGTTGATGGGTGGACGCAGGTGGGGTCGTCGAGCTGGAAGTTCATGACGCGGGAGCA
CGGACCGGCGTGGAGCACGCGGCAGGCGCCGGCGGGGCCGCTGCAGTTCAGGGTGGTGGT
GACTGGCGGGTACGACGGCAAGTGGGTGTGGGCCGACCGCGAGGTGCTGCCGCGACGGTG
GCGCGCCGGCGAGGTCTACGACACGGGGGTCCAGATCACCGATATCGCGCAGGAGGGCTG
CTTCCCGTGCGACACCCACGAGTGGAGGTGAAAGCAAATCGGGGATAGTAAACAAACAAA
CGATCGCCAACATGGAGCCGAAGAAGATGCTGCTGCTGGCTCCTCGTTTTGGCCGGGCTA
CGCACGCACGAAGGATCGCAGCACAGCACCACACCAGACAGGGGAGGTGATTAATTTAGT
TTCACACGAGATGATGACTCGTAGCGGTAGCGTCCTGCTGATCCATCGGCAACTTTGGCT
GCCGCCTTTTCTTATTTTCTTTTCTCCTTGTTTTGTGAGCCTTGTGTATATACTCACATA
CTTACATGAGCTGCTGACGTGAATGAAGGGAAGATAAGTAAGTAAATTAAGCAGAGCATA
TCCTGGGGAGTGGTAATATACAGAGGACGGCGTCACGGCGACGATAGGATATGTGTGTTG
TAGCTTTGCTGCTTCAACAGCTTGTCCCCATGTATGACTATAAGAATATCTCCAACCATG
GACTAAGCGAGCATGTAGGCATAGGAGGGCAAGTTTGTTCATGAAGACGCTAAAGTTCAT
ATGAAATAAATTTTATTGTTACAACAACCACTATTATAGTAAAAAAAATCAATTTATTAG
GGGGTCTAGTCCCCTCTAGAATCGTCCCTGTCTCCAACACGCGCCAAAGGTTTTGGCGCA
ACCGAGCTCTCGCTCTAGCGGCTGCCTCGAAACTATAGCGCCGCGAACCGTTACAGAGCT
AAAAATCAAACATATAATAAATAATCTCTCTTTTATAATAAAGCATGGAGCGTTTCTGTC
GTCGTCGAACATTTTGTAGAAAACCCTCTACTTTTCCCCCAATAATTTTATACTTGTTAA
GCATTGCAATGTTATGTGAAGCNNNNAGTGGGTATTAGAGCACTAACAATAAACAAGTAA
ATGCATAAACAATAAACAAGTTTTTTAGTGGGGTATATCGACATTCATAAGCCTGATAAT
CAAGTTGATTTAATGTGAAAACTATGTGACAAATAATGCGACAAGTAAGAGATAATAATC
TGGCAAGTACCGATGAAAATAAAAGTTATTGAAACGTGGCGACATGGGATCTAGTTTTGA
AGATCTCGTCGCGAAAAAGTCAATGGTGAAAGCGGATCATTAATTGAGATAACGGTTTGA
AAGATAAATCTTTTTAAATGCATTATAAAAAAAGAATATTTAATGATGTCATGCTTGTGC
AATGTTGCATGTATGCAAATAATTGATGAAAGGAAGCCACCGCATGGGAAAACTTATGTG
CGGCGCCGCTCCTAGTTAAGTCCTACAATAAATAGTTCGACAATACAACATCAAACAACA
CAAATAACATACACTTCAAACAAAATCAAGAAAATCAAACATATAATAAATAATCAACAA
TAAATAGTCTAATTTACAAAACCATGAAGATCAACCACACAAAAAAATATTCAATAATAA
ATAGGTTAATTTTATTACAACACACACAAATAGTTTATCTTTCAATACAATAAATAGTTC
GACACTACAACATCAAACGTACAACATTCAACATGCAAATCATCATACGTTTTGTCGTTC
ATTTTATACCCATCATTCCTCAATGAGATCCTTCTGAAGATCATCATGCGTTTCGCTACG
CCGAATGACATGATAGGAGGCAATAAATCGGCCTACCCTCGCAGCCCTCCACCGCACTCG
CACAGGATGTCCCAAGAACTCATACTGAAGTTGAAGCCCTCCGCCCTCGCAGCCCTCCGT
CGCACTCCGCCCAGTCCGACGCACTCACATTCGCATGTAAAAAATGTGAAGTTGAAGCAA
TACATATCTTGCAAAGCGTTCCATCAAACACCTTGTGGGCGCCGAGCGGCGGTGGGCGGC
TAGGCGTTGTTCGTCGGAGGAATGGCGTGCACGAAGGGCGGCGACAACTAGAGGGAGGCG
GAGGAAGCGGCGGCGTCACGGTGATAGTCCGGGGAAGCGTCGCCGGGTTGTCGGAGCAAA
CGGGATGGTGTAGGCGGTGGCGCGAGCGCCTGGAATGGCGGTAGGTGAAAGTCGCGGCGC
GAACACTCGAGTGTGCAGCGCGCGGGAGCAGGCGCATGAAAGAAACAGCGGGCGATGTCG
TTTCGTCCCTCTCAACCACTTATGCCATACGCGCGTTTTTTACACCTTCGCTGGAGCGTC
CGAAGAGGCCACGCTTAAAAGGAGTATTTTTTGGCGCTTATACCATGTGGCTGTTGAAGA
TATTCCAAGGACGTATTTGCTAGCCTGCATGGAGGATGCATGAGCCTAAAAGTTTTCTTC
CCGACTCACTTTTTGTTGTTTGGTAGAGTGTATCAGCTGAGGAGAGTATGCATCAAGTGA
TGCAAAAAAGGGGCCTCAGCATAGCTGAGCCCAGCAGCCTCGCGGAGGCGAGCTGAGTAG
AGCTATGTCGAGCCCAACACCTTCGCCCGGCCTCGCCTTTTACCCTGGCCGCCTCACACT
CGCCCCGCCGCTCCCCGGTCGCCTCACCTTCGCCCTCCCGCGCCCCTTCCGAGCCCCGCC
GCGCCACACCTCTCCCATGCCCCGGCGACCGCCCCCTCGCCCGGCTGCGCCGCGCCTCTT
CCAAGCCCCGACGACCTCGCCTTCGC