Map Locations of contig_38688 (10257 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location No map location




Predicted Genes from contig_38688

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_53849 3 1509 bp MLOC_53849.2 Available Available LOC_Os02g50860.1, FRAME:+1, EVALUE:3e-130, 13102.m05775 protein ras-related protein, putative, expressed





CDS Structure of MLOC_53849






Contig Sequence (10257 bp)

>contig_38688 10257 assembly3_WGSMorex_rbca.fasta
TGGAAGTTAGCTATCCACGTTCGAGAGCCATGAATTGGCTTTGAGATCTTATGGGTTTCA
ACTCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGGCTTGGTTGTTGTTGTTGTTGTGTT
TTTAGAATTTACAATAATGCATATGCGATGGGTGAATGATGAGAATGCTAAAATGTTAAC
CCCTGGAATATCTATACTTCTATAAAAGACCCAGTTGGTGATGGTGTGTCTGTCATCCAC
CTTTCGTGACCCCTTGGTCATGTAGGAAACCCGTTGGCCCGATACATGTATTGAATAGGT
TTTTTTTTTAAGTTTATGAATATGTATTAAGGTGCGTTTGGATGTTTGCATTGAGAGTCT
TGGCATTGCATTGGGTTGAATACCAATATCATAGTATATTGGTATTGATATTGAATGTCA
ATATTTCTGTTTGGATGCTTAGGTATCCGGAACACGATATGATATTGAGGTTGAATGCCA
AATTATGGTTGGATGGTCAAACAGAGGAATTAGGTCGAATGAGACTTTGCCAAGAGGAGA
CATGGGAGAGGGGAGAAGGCCGGCGTTGGATATTACGGTGAAGGCTGGGCGGAAGGGTGC
CGTCGGCCGCTGGATCTCGAGTTGGAGGCAAGACGAGAGGGAGGTCCGTCAAAGGCAGGA
TCTCGGGCTGGAGGCGGGGCGGGACGGAGGGCCTCCGACCGCCGGAGCTCGGGGTAGAGG
GATGCCGGCCACCGGAGCCCGGGTGGACGACGGCCACGAGTGGGCGAGAGATCTTCTGTC
TCGAGCGGGTAGGACGCCAATACCTAGCGATGTCGAGCTCACACCCTCCGAACTGGGCCA
GGGACTTTTTGCGTTAGGGATGGGTCGCTCGATATTGAACCCGAATGCCACAGTTGAATG
CCAAAGTCACCCAAAGGATGGTAATCGGGACGTTCGGCCCAGATGAATGCAAATGTTCAA
TACCAGGCCTGAATGTAAACAACCAAACGCACCGTTAGTCTGTTTGAATCCGTTGCAACG
CAAAGACCCTCTGCTACTAATAGAAGAGTAGGTGTGACCAATGTTGGCATGTGAGGAAGC
TTTGCTATTACTAGAAATGTAGGTGTGACCAATGTTGACATGTGATGAGGCGATAAAATG
AGACCGTATGCAAAGTATTGCAAGGGAATCTACAGCCGGGCTTATAAATTTGGCCCATTG
AATATCCTTTTTAAGCCCTCCTTTGTGCATGCATGCAATCATGTAATTTTGTGCTTAAAT
TATCTTGTCAGAAGCATATGATTGATGGGAATGAAGAAAGAGGAAAAAAATAAATAAAGA
GAAAAGATGCACCGGAGCGACCGCGAACCCTCGTACTCATGCCATATATGTGCTAGATAC
GAGGATTTATGGACAATCTAGACATATGGTATGAAGGGACCGGTTGTAGATCCCTTAATG
TAGCTAGGACTACATAAAAAATAGCAAATCCTTGTGCCCGACCCTTAATTTACTTTTCTT
TACTTTACCTTGCATGTTTCTGTTAGGTTTAATATTTAGCTAATTAACTTGCTTGGGATC
CTCTAAAACAACGTTTGTTGTTGATGAATATGCTCTGCCGGTTACCAGTATCAATAAGAT
TTCAATGTTGCTCTTAGGACTCGTTCGATAATCCACCAGCTCCTTCAAATTTAAGAATCT
GTAGAGCATCTCTCCAGCCATTCCACAAATTGTAAATGTAGCTCCATCCCCTCCGAAAAC
GGAGCAGAGGGACTCCGAACGGTCCCTTAATGTCGCCGGCCATGGAATCAACAAAATAGA
CTAACTGAGAATACACCAAGACTTCAAAAGTTGCGACCTTGTCACTGACAGAGTCAAATC
TCGTTTGCTTCTACACGGACTTCCTAACACGACGAATGCTAATAAAACACGGGCATTCTG
CAGTACATAAGCAAGGGCTAGTTTAACCATCTACCTCTAGTAATTAATTACCAACGATGC
AAATATACACATTGACCGTGCAATCAGCACATCCAACGGGTCTGGAGTGTTTGTCAATTT
GGTGCAGCGCAACCGTGACAATCGCTTCAGGCAAGGGACCTTCTCCTTCATCATTCAGGA
TTTGAAGCATAGCATTTTCCTTCCGCTGAAGTTCCTGCATGTGTAACACACAAAATTCAA
AGCTAAGAAGCAGAACACGGATAAAATGGTGATCCTATGCGTTCATTTTCATACACATTT
CCGAACAATAGCATAACCAAACTCAACATGTCTTAATTCACGGTTTAGGAACATAACACG
GTAAGACTACAATGCTATGATTCCCTTGCCACTACTGGGGAGTGGGCGGAGTAACCTAGA
TCTAAAACACCAAGTAGGGGGTACTCAAGTCACTCTGGATATTATTATTTTTACACAATT
CACGTTCTAGGTAAATTTTGCTATTGCAGACAATGACTCGAATTAATCGTGCCAAAGTTC
TACGAATGATCAAAAAATAGCTTTAGAACTAGTTGCTCCCTCTGAGTTTCCAAAAACTTT
TCATTCTGGACATAGCAAGTCAAACTTTAAGAACTTCGACAGCCAATATCTCTTGCAAAC
AAGATTCAATAATTGAAAAGGTACCTTTATAATATAAAGTAATTGGGTTATAATTAGTGG
AAGTAGTGGTCAAAGCTGCATTCTGGAGAGCGTGCTTATGTCCAAAATGATAACTATTAC
AGTATTGGAGGGAAGTATTATGAAAAGGAAAAATGACAATGAAGAGAACTGCAAGTGTCG
TATTTACTTACATCATAGAACATCCCCGACGCTGTTTCTTTTTCTTCTTTTCTCTTTGTT
TAGTTGGGGGCTGGATTACTACCTTGATAGCAGCATCAAACACAGCTTTGACATTCTACA
TGTTGCACAAGTGTAAGAACTTTCAGCTTACACAAACACTTTGAAGAAGACACAATTGTT
GCAGCAAGGGTATACAGTTCGCTTACAGAAACCTTTACCTGTTGTGTCTTTGAGCTGCAC
TCTATGTAATATAAAGCACCAACTTGCTTACGAAGTTCCTCCCCCTGTGGCAATAGCAAT
TTCAAAATTGAGTTTTCAGATGCATTTATCATCTCTTTGATCTAAAGGTCAAGGACATTC
AAAGTTCTAACCGATTTATCGACAATCAACAACATACACAGTTGAGATGTACCTGTGCTG
TGGTAACGGGTATCATCCCAGGGTGGTCCAGCAAATAGTGCTTATCTTCACGAAGATCTG
GAAGCAACATTAGGATTTTAAATATTAAAAGCATATTTAAATAAGGAATGATTTGTCGTA
TATAACCATATAGTGTAACATGGTATTTCGTGTTTGCGTGTTAGGGTTCCTATTCCCAGC
AGCACATGGATGGTATTGACAGTTATAATGATGTTGCTAGGAACAGATGATTAATTTCAC
AGGAAGTTAATCAATCATAGCAAAGCTTTTTCATTATTGCGTTTAAACTCGATATATCAT
GCAGTCCAATCCCTAAACGACCATAAAGCTTACCATATTTATTAAGCTTCACCAGACAGA
CTATTTAGTCAACAACTATTTGGATGATAGCTTCTGTAAACCACAAAGTATCTGGCCCCC
AACTACATGGATGATAAGCTGTCTACACTACAAAGATCACTATCAGTGGATTACCAACCA
AACCAAATTCCAACCACGCCAAGACAAGGAGACGCCAACGAGTTATAGGTAACAGGACAA
AATACACAAATCATGCCACCAATCCCACCCACCGCCCACCTATAAGCAGTCATTAAGCAA
ACAATAAGCTTTCACTGTCAGCACAACTCACCCAGTTTTGTGCCTACCAGCACAACAGGT
ACGCCGGGCGCGTAATGCTGAAGCTCCGGTATCCACTGAAAGGGGAAACAACAAAGCCCA
AGACACTCAAACCTCTTTGACATTTTTTCCAAATAAAAAGGAATAAGTAAGTCCTACTAC
AAAGGATGGTGGTAGAACATTTTGGCACCTTCTTCATGATATTCTCATAGCTAGCTCGGC
TCACAAGGGAGAAGGCAAGCACGAAAACGTCGGCGCCGCGGTAGCTTAGAGGCCTCAGCC
GGTTGTAATCCTCCTGCCCTGGAAAAGATGGCACCATGTGAGCTCCCCGGTCACCCAATG
GATCATTCACATTCACAAAGTAAATTTAATCTGCCACTGTGATGTGCAACTGAGACAGAA
CAAAGCCTACTACAAATCACAGGTGCAGCAGGGCAAAGAAAGCAGTGGAATCAAGAGGCG
AAACTTACCGGCGGTGTCCCAAAGGCCCAAATTCACCGTGGTGCCGTCCGCCACCACGTT
CGCGCTGAAATTGTCGAACACCGTGGGTATGTAGTCCTGCCAAGGCAAATGCCCGTCAGA
GAATTGAGAAATTAGTGTGTCAGGCGCAACGGAAAATCACCCGCGACGCTAATCCATCAC
AAGGAAGACGCCTGGAAAAGATCTTTTGCACAAAATCACCACCAGTACTGTGCTGAAGGA
AAAAAAAATGCCCCAAAATGGGACATCTAAAGCTCGTGGCTTTGGCACAAGAGCCGGTGG
CGGCGACAGGGGGGAGAAGGGTGGGGGAGAGGGGGAGAAACATTTGGAGCTCACGGTGGG
GAACTTGTTGCTGGTGTAGCAGATGAGCATGCAGGTCTTGCCGACGGCGCCGTCGCCCAC
CGTGACGCACTTGATGAACCGGGAGGCGCTGGACGCCATGGCTCGCCGCGCGCCGGCCTC
TCCGATTCCTTCCCCCGGAGCTCGGCTCGAGGAAGGGGGCGGAGGAGGGGTGGGGGACTG
GGGAGCGGAGCGGCGGTGATGGGGGGTGGTGTTTGGTGCGTGACTTCTTGAGGAAGTGAA
GAGGGTCACATGCTCGGCACCTCACTGTACTGTCGCGAGGGCAGAGAAGTAGAGGAGGAC
GAGTCGACCAACCCCTCCCCCGCTCCCTCCCGCTTGTCGCGTTGGTGTGCTTCGGTGGGG
GGAGTGAATTGCATTGCAGCTCTAGGATAGGACCTGTGGATTTATTTATCATGATACGCG
TTTCAATTTCAGCAGGGAACATGAGTGGTACTATTCTCCCTGTGTCGGAAAATACTTGCT
ATACGAATAATAAAGAAATAAATGAGTATATCTGAAACGTACTGAAATACGTGTAGACAC
ATCCACTCCTTCGACAAGTATTTGTGAAAGGGGGAGTATTTATCAACATCGCCGTGTTTT
TCCTCTCCGATTTTCGTTATTGGTTTTTCGTACATGTAGGATTTCTTAAATTCGTACCAA
CTCATGCTCATACCCCGCAAAGAAAAACTCATGCTCGTAGTATATAATTTTTAAGGTAGC
CTGGTAATAGATAAGATGTAAAGATGGACAATAATGCTTATCGTGATAGCTATACGGGGC
ACCGAACTTTCGTCTCGAAAAAATGGCCAACTAGCTGAACTTACTAATATTGGCGCGCTT
ATCTTGTTTCAAAAATTGACACATTATTGTGCGTAATTTCACGAAATAACCTAACCAACA
ACTGATGTGACTCATATATTAAAACTTTACTTGTCGTTTGTAGTATAATGACTACTTTAA
AGCGGAATTGAAATGCTAGGTTTAGAACTCTGTAAGACGGAGATGGCAGCTAGATGATAG
GGTTCGATCTTCTTAGTTATCACCAAACCAACCATCTTTATGTATTTCACTACCGAGTGC
TCTATCTTTCTTATGGAATAAATGAAATAAATATGCACATCTTTTCAAATATATGCTATT
AATTGCATTTATATTGTGGTATACGTGTCACAAGAATTAACATCCTGGTTGAATTGTATT
AACACTCCCGCCTTTTACAAAGTGCTTGGCAGAAAGCAAAGCGATGTGGTGATTATTGCA
GTTTTGCTTTATTATTTGAAGTCGGGAATAATAGACAAATTCATGAATTTTGTCGCCTAA
CGGAACTTACTAATATTGACACACTTATCTTGTTTAGATATTTGACCACATATAGCGCCT
AATTTCATGAAACAGCCTCGCGGACAGTTGACGTAGGTCATACATTAAAAACTTTAGTTG
TCGTTGATAGTATAATGACTACTCTAAAGCAAACTGAAATCCTAACTCTAGAAGTGTGAA
AAATAGAGATGGTGGCTAGATATTAGAGTTTGATCTTCATTCGTTATCATCAAATCTCCC
GCGTTTATGTACTTTGCTACCAATTACTCTATCTTAATTATGCAATAGATGAAATTAATA
TGCACATCTTCTCAAGAATTGCTTTTGTATTGTGTGTATATGTATCTCAAGAATATGTTA
TTAATTGCTTTTGTATTGTGTGTATATGTTATTAAATGACATGATCTCAAGAATTGCAAG
TATATGTTATTAATTGCTTTTGTATTGTGCGTATATGTATCTCAAGAATTATCATCCCAG
TCAAAACGTATTAATAGTGTCGACTTTGACAAATATTGGCAGTTTCATTTATTTTACCTT
TGAATGATTGCATGATTTTGACTACCATGTTCAATTATATATTATAAAAAAGCGGAATAT
GACTAAAGTTTGCAAGGCAGATCAAATGACATGATCTCCGCCTTGTTTATCATATACAAA
TAGAGTATATATTACACATAATACGGCTCACGTGGGCCTACATTAGTATGGTCGAGGAGA
GTGCTAGGAGTGTGCACAATGGATGACCATATCCCGAAATCTTCAAGATTTTCAAGCTGT
GCGGAAAGTGCCAAGAGAAAAGCAGGATGTTTTAAGCACGAACTCGAGAGGAGTGTTCAT
ACACAAAGTGACAAAAGTTTCCAACTAACCAACCACGAGTCTTGGGGCGGAAGGCAATGC
ATTTGTGCTCCGTTTGGTGATGTTTGATGCCCCTTTCCTGTCTTTGTCATCAGATGCTAT
GTTTTGCAGCTCAAGTAAAGAAAATTCATGTCCTTCGCTAACACGTAATACGAAAAATCC
GTGTCACCGTAGCTGTGCTTGCTTAGCATTTTGTGTGTGCTTCCTGCCCTGTTCCGTTCC
TCCCTTTTCACCTTTCTCTTGGAAGCTTGCTTAATAGTGCCCTCGACACGCGGTGCACAC
CGTGATCTCAATCATACAAATCATTGGTAAACGAGGCCCCCATCATCGCAAGGGCTAGCA
GCGCCTCAGGAAAGCCGCCGGTGAATGTATGAAAGAAAAGAGGAACTGAGCACTCACCAG
TCACCAATTTACAAAGTCAAATCATGAGGAAAGCACCCGCCACCAATCTGCGAGGTCAGA
TCGTCATGGCAAAGGCGTATCCATCAGTTTACAAAGCGAGATCGTGGCAAGAAGGAAGCA
TTTTATAGTTACCCTCTTGGCAATTTGGCATGCCTTTACTTGCCCCTTACGATGAGTAGA
GACCGATCAATGCCAATACTCCGCTGATGATGGTATGAATAGTAAGGTGAGGGTGTCGAC
CGGGGACATGTACGCACACGTCAAGACGTAACGTAGAAAGATGATGAACTCCAAGCGCAA
CCACGCTTTGTTTAGATATATATTGTTTTCCCCCGGAAACTTTGTTTAGATGATGCATCC
ATTGACGTTTCTATCCGTTACCAATGGGTCAGATGACCTTTTCAATAAAAAGGGGAGGGG
GGCGGATGACCCCACAGCCTAGAAACAATTTATCATATACATTGTGAAGAATTTTTTTTC
AGAAAATTAGAGCAACTCTAACCGATCGACCCAAACGGACGGTCATTTTATCCGTTTCTC
GTCCGTTGGGGTCGACCCGGCGGACACCGGCATCCGCTCCGTATTTTGGGTCGACGCATG
CGTCCAACTCTCGTCCGATCCATTTTTACCGGCGCGTAAAAATAATAAAAAAAGCATTAC
AAAAATATATAGCACGCATTCATTAAGGATTAAAAGCCGGTCACGAAGACCAACGGGAGT
CCACGCGTCCACATTACATTAATTAAACATAAAAAACTAACTATGAGGCAGGCAACCCTA
GGCGGCGGCGACGTCGTCGTTGTCGGGGCCGATGAGGTCGACCAACGTAGGCGCAGTGCC
GACCGAGGGGACGCCGTGTTCCAGAGCGTAGCTGCCTGCGCCTCCGTCGTCTGTCCCGCC
GGCGTGGGCTGTGCTGGTGACGGTGGCAGCGCAACACGGGCACGCTCCACCTCCTCTATC
TCCCGTCGTTCCTCCTCCATCTTCATCTGCCAACGGCCTTCTTCGCGCTCCATCCGCAGG
TGCTGTGACTTCTAGTGCAGGAGGTAGGCTTCCTCCTGCTCCGGTGTCGCGTCCAACCAG
ATGAGCGGCGCGCTGACCCACTCGTGGAGCTCGTCGGGCCACTGGTAGACCTCCGGCTGT
GAGGGGGCACGACGCAGTCATCGGCGGCGGACAGCGTGATGGGCTTCGTGAGCTGCGTCT
CGTACGCGCCCTCCTCCTCATCGGCCTTGCACCGCTCCTCCCCCTCGCTCTTGCGAAGAA
CGGTTGCCAGCGCCGTCTGGTAGGCGGCCTTCGCCTTCTGGTCTTCTTCGTTAAAGACGG
GCGGGGGTGGCGGAGGGCCTCCCGGCTGCACGTCACGCATGTCATGCCGGCGCTGCTCCT
CGTGCTCGAGCACGAATCAGACCTCCTAGTTGGGAGAGTCGGCCGCATACGTCGGGTTGA
GCCGCTGCTTTGGCGTCAGTTGACGCCGCCGACGACTCACCTCCTTCACATGCATGTGTG
CCGACACTGGGATCCTCTCTAGATCTAGGTGCCAGTTGTGCGGAAGGGTGACGTCGGGGT
AGTGCATCGGAACGCGATGCTCCCGGTGCCACCGCGCTTGGTGCACCGGGACGCTGATGC
GTTCGCGAGGCCGGCGGTGGTTGGCGGGGGCCTTGCCTTTGTTTTGGAAGCAGCCGACCA
TGGCTAGGGTTTGGTCGCCACGAGGCGGCAAGACGAGGACGGGAGGGTTCTGAAAGTAGA
TGGCCGAACCCCATCATACGCTCGGATTAAAAAAGGCCGACCACGGTCCCTGACTCGCGG
GTTCGAGGAGGGCGACCATCATAAATTATGTTGACCATGGTTGTCGAGGCGAACACCGAA
AGGGCGCGCCGCATCCGCTTCGCGTCCGCGATGATGCATGGACGCATTTCAGTTCCAAAT
TTGTTCGAAAATAGATCGACACAAACACGACGCAGACGCGTTTTAAAAATGAATCGACGG
GTTAAACCATCATTTTTATCCGCGAGACTCTAAACAGACGACGGTAGACGAAATGGATCG
GACATTGAAGTTGCTCTTAGCAATGATCCCACATATTCTTACATCGATCGATCATGAGAA
AGGTCCAAACGGGCTCCCGGTGCAGCTGGCGTGGCGGCACGGCCGGGGACAAAAGCGTCT
GATTTTTCCTGTCATAAAACGCACAATTTTCCTTCTTGTTTCTTTCTCCGGCCACCGTGA
CCATATTTTTTTATGGACCGCCGTGATTAATTATATGGGCGAACAAAGGAGCGAACGAAC
AAGGCTTGGGTTTACTTGGAGCGATGTGCATGCATGCCAGCTGGTCGTGTCCCTGGCACT
GACGGATCCGCAGCGCTTTCCGCGGATTCGTGCGCGTGTGCGTGCCTCTGCCTGCCCCAG
AACCGCATATAGTAACCGCTGGTCGACGTGGCATGCTGGAGTGCGCGCCATGCCGCGGGC
AGCTGGTCGTGGGCACCGTCGGCGCCTTCTTCCACGGACGCGTGTCGCAACTCACGGGAC
ATGTGGTGGGATGAACACGGATGCCGGGGGCTGCGCGTTGTGCCGAAAGCAAAGCGTTCC
TTGCAGAGCAAGATTTGCGGCGCCTGCCGCTGTGTCCCGGATAGCGCCTCGTTCGATTCA
TACTCGAGTCCCGACGGGTCTCATCATCGCGGTCCCTCGGTATAATTTCACTTCCCCGTG
CTGTCTGTAAGCCACTTAATCCTGCAACTACATTAGTACTTCGGCCGAACCGACGCGCCG
CTCGTCCCTGGCGCGCGCGAGCCCTTACAACATTTTTTCCATCCGCACGCTTCTTCGGTT
AATGGATGCAACGTTTTTGTCTAAATATGTTGCAACCTGTGTTATTTTTGTTTTTTACTA
TATTTTGTCTTAGTAAAAAAAGCTGCATATACGTTTGGTTGCAACTCTAGTTTGTTGGAT
TATTTTGTTACAATCGATGTTTTTTACTTTTTGTTACAACCGTGTTAATTTTTGCTACAA
CCGTTCACTAAAAAGTTGCATACACGTCACCTAAATTTTTGTTACAACCGGCGTTTG