Contig Data
morexGenes
Links



Map Locations of contig_38669 (3000 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_38669

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_53826 2 2987 bp MLOC_53826.2 Available Available LOC_Os03g45300.1, FRAME:+2, EVALUE:0.0, 13103.m04879 protein transposon protein, putative, unclassified, expressed





CDS Structure of MLOC_53826






Contig Sequence (3000 bp)

>contig_38669 3000 assembly3_WGSMorex_rbca.fasta
CGCCGCCGCCGCCGCCGCAGCCCCCCTTCCACCTCCCTTTGCCTCGCCGCGCCGTATGCG
GCCCGATCGACCCCGCCAGCCCCTCCCCGCCCGCGAAAAGGGGGCAGCTTGATCTCGCCG
CCGCGGCCATGGAGCGGGCGGCGGCGGGGAGCGAGCAGGGGACGCCGGACAGCGAAATGG
GCGACGGGGACGGCGACAGCGTCGGCTACGGCACGGAGATGGAGCTCGACCCCTCCTCCT
CGGCCTACCCGGCGCGCCCCAGCGTGCACGACGGGGTGGACCCGTACGAGGGCATGGAGT
TCGACGACGAGGAGGACGCGTGGACCTTCTACAACCTCTACGCGCGCCGCGTCGGATTCA
GCACCCGGATCAGCGTCATGCACCGCTCCCGCCGCGACGGCTCCATCATGTCGCGCCAGT
TCGTCTGCGCCAAGGAGGGCTTCCGCACCTACCGCGGCAAGCACGACGCCGCCCTCAGCC
CCGGCGCCGGGGAACACGCCGGCCGGGGCGCCGCCGGCCGCCGCACCCGCGCCGTCACCA
GGGTCGGGTGCAAGGCCATGATCCGGGTCAAGAAGCAGGACGCCGGCAAGTGGGCCATCA
CCAAGCTCGAGACCGCGCACAACCACCCCCTCGTCCCGCAGAACCAGGCGCACTGCCTGC
GCCCGCACAAGCCGCTCTCCGAGTGCGGCAAGCAGCGCTCCTCCTCCTCCTCCTCCTACG
GGGTCCGCCGGAACGGAGGTATGTTCCTCACCATCGAGCCTCCGCCCCCCACGCCGCCCG
TCCCTCAGACCACCAGCATCATCGCCGCCCAACCATTGGCTCCCCATTACATTTCTGCGG
ATGGCATCGGAAATGCCACTCGGGTCATCCTGGATTATGTCAAGCGCATGCAAGCCGAGG
ACCCGGCCTTCTTCTACGCCATGCAGTTCGTGGAGGGCCATCCCGTGGGGAACGTCTTCT
GGTCCGATGCCAGAGCAAGGACGGCGTACAAGGACTTCGGGGACGCCGTTTTCTTGGACG
ATCACTGCAAAAGAAGCAAGCATGAGCTCCCCCTCGTCACATTCACCGGGGTCAATCACC
ATTGCCAGCCGGTCCTGTTTGGGTGTGCGGTCATCAGGGATAACTCTGAGGCATCGTTTG
CCTGGCTGTTTGAAACACTTCTCCTGGCAATGTCTGGCCAGCACCCTGTCTCTCTCACCA
CCGAGTATGATGGCGCCATACAGTCGGCTGTCCACAAGGTTCTTCCTCAGACCAGGCACC
GATTCTGCAGCTTGCACATCTTGAATGAAGCCCAGTGCAAGCTATCAGATTTATTAACTG
CGTTCCCGTCCCTTTATGATGAGCTTGTCAGTTGCATCAACATGTCTGACACAATTGATG
AGTTCGAAGCAAATTGGGAGGCATTGATTTCCAAGGTTGGGTCTGGACACAACGAGTGGC
TTGATTCAATGTACAATTGCCGGCGGCAGTGGGTCCCGGTATACTTGAGGGATACATTCT
TTGGAGACGAGCCATCAAGGCAGGGGTGTATGAGCAGGAGCTCGTTTTTTGAGTCTCACA
TCACTGCTAAAACTAATTTGCAGTCGTTCATTCAGCACTATGAAAAAGCTCTCGACAGTT
GTTATGAGAGGGAGGTGAAGGAAGAATTCGAAACAAAGTATTCGCTTCCAGACATCAAGA
CATCATCTCCTATTGAGAAGCAAGGAGCAGACCTGTACACAAGGACACTGTTTTTGAGGT
TCCAACAGGAATTGGTTGGCGCCTCTGTTTGTACTCTGGAAGTGGCAGAGGAGGATGGTA
AGGCTTGCATGTATAAAGTGACAACTTCTCAAGGAAGTGAGAAGCCCCGTATGGTTCAAT
TCAATTCTTCTGATAGTTCTGCAAAATGTACCTGTCAGATGTTTGAATATCTTGGTATTG
TCTGTAGGCATATTCTTACCGTCTTTGGTGCACAAGGTATATCTACGCTTCCTTCTCAGT
GCATCGTAAAAAGATGGACCAAAAATGCCACAGATAGAAGTTCAGACAAGAAACCTGATG
AAGTTATTAGAGTTAAAGAGCTCAAGGAGGAGCAAAGAAGTACTGTTGAAGATGGCGAGC
AATCTCAGACATGGCGTTACAACAGTTTGTGTCGTGAAGCACTTAGGTATGCTGAAGAAG
GAGCATCATCTACAGAGGTTTATATTGTGGCAATGCAGGCTCTTCAAGAGGCTGCTAACA
AAGTAAATATGGCCAAGAGAGCGATTGGACAGGTAGCACCTTTGGCAGTAATGCCAATTA
CAGCGCAGGCACCAGAAAGTGCTGGAAAATTCTATGATGGTTTTGGTCAGCAAAAGAAGA
GAAAAAGGAATTCAAACAACTCAAGAGAGAACTCTGCACCGAATCAATTTATGCATATGC
AGCAACCTAGTAGTTACCTCTTTGTTGGTCCCAGTACATCAGGTGGTTCACAAGGGCCTA
GTCAGCTAGTTGCTGCAATTCCTGTTTCTTCCTGTGCACAACATGGGCAGACATCGGGTG
CAAATAACTCAACCGATGGCAACATGACAACTACTTCTGTAGCTGTTGACAAGTTTCATG
GATTCTCTGGCCGAGATGCACCAACAACAGCACCTTCTTCAGGAAATGTTGTGCAAGCAG
GAGAAACTAAATCTTCAGGGGTTCCTTCACAGATTAACGAGGTCATTAACTGTACTGACT
ACCAAAACTTTCATATTCATATCGTCCTGTATTATGCTTTAATTCTTCATTGTGTGCTCC
ATTGAGTGAGGTGTTGCTCACTTTGTTTGCTGGTTATTTGGACTAAACAGGGCAGGTCAT
TGTTAGTGATGTTGTGCATTTTCTCAATATGTGCACATGTGTCTAAATCATCAGTTATAA
AATATGGAAGGGATAGTATAATGTATGCAACGAAACTTGCAAAACTTCTACACTTGATTG
TGAACATCGTTTAGGAAGTTTAAAGAATAGGGACTTGTAAACTACTCCCTCCGTTCCTAA