Contig Data
morexGenes
Links



Map Locations of contig_385588 (2293 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_385588

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_53689 2 1371 bp MLOC_53689.1 Available Available LOC_Os04g13150.1, FRAME:+2, EVALUE:9e-13, 13104.m01206 protein OsFBX125 - F-box domain containing protein, expressed





CDS Structure of MLOC_53689






Contig Sequence (2293 bp)

>contig_385588 2293 assembly3_WGSMorex_rbca.fasta
TAGGGTTGGGAGGGAGGGAGGGAGGGAGGAAGGGAGACGTGCGTCAGTGGACTGCAGTCT
ATGTTGTTTTCCAAACACCTAGCAACTATGGACCAATGTATCTCATCTAAATCATGGCGC
TTATATTCGTACTTATTTCCACTAGATGTTACTTGATGTTCTTTCTACATCTTGCAACAG
ACTTTGTTATGTGGAGATTTTTTGTTCTGATTGGTTTGCATAAATTTGTCAAATCAATTA
TCATCAGAGGTCTTTATGATCTTTCTTTGTTCTTCTACTGTGAAAAGTGAATCTTGTATG
TAGTTATGCAAGAGATGTAAGTAACTAGGGGACAAGAATAAGGTGACTGTAACATCACTA
AATCAGTTATATGACTTTGCATACTTAACCGGTTGCAAATGTGACTTGAGCAGTCGCAGC
ATAAATGCCAAGCCTTGCCATTTATTCTCAACACACGTAGACTATATTGCAGAACAAGAA
TTCTTGGGGTTGCATGTTGATCTGTTTATGTTAATGGTATTTGGTTTGGTTAGATAATTT
CTTGTTCCACATTTTATCATTCTGTATATTATGCCATTTCTTCCACATATCAGATCCAGC
ATTTACGTATGCCTAGGTATATTGCACAGTATGGCTTCACAATATATGTTGAGGCTTTCT
TCGCTCTCCAAATGCGTGCACCTTCCTCAGATGCTTCCCAACTGTTGACCTATTTAATCT
GTTTGCAGTCTGGAAAATGCAATCAGTCCACTGGTACGCTCAACCTCAAGTTCAAGGAGG
TTCCCATGGAAATTTCCATGTCAGGCATCTCAGAGATGTATTTCCATGAGTTCCGAGGGG
ATGAAGGTGAGGTTGCCTTCCTCAAGTCGTTGTTCAAGAGTGCGTATGGGCTGGAGAAGG
CGGCTATTATGATGGCAAATCCAAGCTTGACGCCGTTTTCACCAGATGACGCACTTTCCA
AGGTGAAGAGTGAGCTCAGTATATCCCCCGGCCATGTGGTGGTGCTTGTGAGTGGAGGTC
CTGAAGGAGGAAGACCGTGGAGTTTTCAGAAAGGAACTGATTTTTCATGCGAGGACCCTT
TTTCAGTAGTTGCGGTCTCGCGGAGAACGGCAAAGTTTAGTGCCACTGGAGCGGCGTAAT
GTGCCACTGGAACGGCAAGCTTGACGGCGTAAAGTTTAGGCGGAGTATGAAGCACGCATT
GTATCGGAAACTTCGGTGATCCTACTTACATTCCAAACTTTGTGTTAAACTTGTGGCCTG
ATTTCTGGGGGCAATCAGAAATGCGATGTACTGATATTTTGCTTGCTGTGTCACCTTGTG
TTATGAGCTTCCCTAGGTTTTCTCCTTAAAATGCTTGTTGATTGATCTGACAAATTAATT
GTCATGAGAGCACTACATGGTCTTTGACATGCGATGTAGTGATCATATGCTATATATATC
TTTGAACTGAACGAACATATTATCTTGACCAACTATGACTCGAAAACACCAAGTGTAACA
CCCAAATTTTTTTAAACTTTTATTTCCTTGATCTTCTTGGAATTTAAATTTTTGACTTGA
CAAGAACTTTGAAGTTTTCTTGCTAATCTCCATGAGAGAAAACTTTTGATCTTCTTCTCT
ACCAAACAATTTCAGAAATATCCTCTTGGCCCTTTCTCAAAAATGAAATGGTTAAAAGAA
TATTTCTTTTATTCTTAATTTAGATTTTTCCCATAAGCCTATTTATTAATTCTTCAAAAA
GAATTAATCACCATTCTGTTTTAAATATTTTTACTCCTCTCCTAGCACTAAGATTTGTTT
TTGAATGTTTCCAAAGATTTGGAAGGGATGGACCCCCCAATTATTTTTATTATCAAAATG
GGAATTTCTGTAATCAGTTTGTGCTCCAATTTTTTTTTCAAAGGAACCTTCTTTTTCCTT
TGGAATCTTTACCCCAAACTTTGGCAGTTTGTAGTCCTTAGTATCCTCAGTCTATTCCAG
CAAAAACTTTGGGTTCTCAAGTTTGAAAAATTCAAATTTGGTTTGACTGAAGTTTGACCC
CAAAAACTCATTTTTGATTCAAACCTGCCTTAAACCCCTCCAAAAAATTTGGAAATTTTT
GCTGCATCATTTCTTCCAATGAGAGTGCTCCCCTCAAAAATTCAGCTCCAAATTCTCCCT
GCAGCTATCCTTTTCATTCTGTCGAGCACCTCATGTGCACCCTGATTGAAACTGTGTGAA
TTAAATTCAGACCAAACTTCAGACAGAGCGCAGCCTCCTCCCCCGTCGCCAATCTCGCCA
GTAGCAGCGCAAT