morexGenes - Barley RNA-seq Database

Contig contig_385428

Source Contig contig_385428

Contig Data

|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|

morexGenes

morexGenes Home
BLAST Search
Keyword Search
Samples and Analysis

Links

James Hutton Institute Home
BioSS Home

Map Locations of contig_385428 (407 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
	No map location	No map location

Predicted Genes from contig_385428

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_53661	1	335 bp	MLOC_53661.1	Available	Available	None

CDS Structure of MLOC_53661

Contig Sequence (407 bp)

>contig_385428 407 assembly3_WGSMorex_rbca.fasta
GACTCTGCTTTCCGACTAGAGCATAATTTGCATCTCTATGATCTGTGTTTGTACGAGCAT
AGGTTGTGGAGCATATATGCATATGTAAATTCTAGCACGGCCTACACATATACAACACCT
GTGCCATATTTATAATATACAACAAGCGGACCATTGTCTTGCTGTTAATTATCGGAAAAG
TTTATTTTATTTAGCACTGCAATGGATGTCTCGCAGCTAGTGGGTGGAAGATTCCTGTAT
TTGACATTAAGACCCACTGATTGACAATTGCAATTTTCAGTTTCTTTACTTATATCAATA
ACAAAATAGCTGTGGTATCTTTTCCATGTCACTACCATCATTTTCATCGGTTTTTGCTAG
TAGAATAGGATGACACATATTCTTAGTAGAGACACTTACTAAAGAAC