| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
| No map location |  |
No map location |
Predicted Genes from contig_38511
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_53613 |
1 |
569 bp |
MLOC_53613.1 |
Available |
Available |
LOC_Os03g01300.1, FRAME:-3, EVALUE:4e-39, 13103.m00046 protein LTPL114 - Protease inhibitor/seed storage/LTP family protein precursor, expressed |
CDS Structure of MLOC_53613
Contig Sequence (7866 bp)
>contig_38511 7866 assembly3_WGSMorex_rbca.fasta
GATGTATATAGACATACTTTAGAGTATAGATTCAATCATTCTGCTCCGTATGTAGACCCT
TAGTGAANNNNNNNNNNNNNNNNNNNTTTAGGAACGGAGGGAGTATTTCTTATTTTGACT
ATATTTGTAAAACTGAACTGAGAACGGTATGCTCGTAATATTGGACTATTATTTCTAGTG
TATTCAATTGTTTGTTACGGTCAAATGAAGAGGCGATAAAATTGCTAGTGTGACCATTGT
GGACTATGGCTTATCCATGAGTCAACAAACACTCATTATAGCTTATATCCACTTGTCACG
GACAAATATGCCATTATTCTGGCTGATCTATAAGCATTATAAAGGATTCAGGTTATGAGA
AGCAAATACTCGTAGCAACTTGAGATAAATATACAACATATGATTTTTACATCTCCCATA
CACTTCCAATGCTGCAACATTAGGCAAAGTGACGTGCCGATTTTATGTGAATGCTATTTA
TAAAACTAAGCCAGCTTGTTAAAAATAAAAAAGGCATATTTTTGCTTAGCAATGATAAAC
AATCTACACTAGAATTTTAATGTTTATGGGAGTACCAAACTTGCAAGTGGCTTATGTGAT
ATGTCCAATGCATTTAAAAAAATAATAGTGCGGACGAAACCAAATTAAGAATATCACCTT
CTTTATTAGTAGGTAGATATAGATTTCTTTTTTCCTATTTTTAATTTTTCTTCTAGTTTT
TTTTTTTTTTTGCTTTCTTTTTTTTTAATTTTTGCGAAAATTTTTCAATTTGCAAAAAAA
ATAAACTACAAATAGTTTGAAATCTTAAACATGTTTCAAATTTGCGAACATTATATTTGA
GTACATTAACATTTTTTAAAATCAAGGAAAAATATTTGAACTCGTGATTTTTTATTTTCT
AAGATTTAAAAAAAACTATTTTGTAAATACTCCTAATTTTTGTCAAAATCACAAATATTT
TTGAAAATCTGCAAAGAAATTATGATTTCCCGGACAATTTTGAAAATCATGAACGTTGTT
TAATTCATGGCCATTTCTCTAAAATCATCAATATTTTATTGTTTTCATACAAAAACATTT
TTACAAAAGCATGAATATTTTTTGATTTTGCAAACAAATTTTTACCCAAATATGTTCCAA
AATCATGAACATTTTTCAAAATCACAAACATTTTTTCATTTCCGCAACATGTTTTTTAAA
ATGATGAACATATTTTGAAATCACGAACTCTTTTCGGAATCCTGGCTATTTTTTAAAATG
CATAAACATTTTCTGGGGTTTGGGAAAAAAACATGAAGATTATTTTTTTCCAGAACTTAT
ATTGAAATCCCAAAAAGAAAGAAACGGAAAAATACAAGGGCAAACCTTCCCGCACTTGTG
CCACCCCAAATCGTGCGCAAACATGGGTGTGCGTTTCGTGGCTATTCGACGTGTGGGTCA
GGCAATTGGACGTCCCTCCTTTGCTTCATACTATTTCACACTAACCATCAAACATGCCCA
TATGGACCATCCTGCGCGGGCCAGCCTGCGGGCATAGAAATTTTGCCCAACATATGGTCG
AGGTGAATGAAAGTGTCGGGGAACAACACCTCATAATTGAGTTATTGACTTTCATGAATA
TCAATTATCAATGTGTGATGGCACTGAGGGGATACTTTGGAAACTGGGAGTGCATAATTA
GAGGAATGGAACTTAATCTGGCTTGAGATGTTGATTGTGATAAAAAAAAAGGAACTACGA
TTGTAGGTGGAGTTACATAGAGTTTTGGAGGAGCAGTGGTACTCATGGTATAAACTCAAC
CCCAATGTACATCGTCGATCGGCTTGGGCAAGGTCGGTACCGTCGTCGTGCCGGATCGAC
TACCGATGACCGTCGTCATTGTTTTTGTGCTGGCGTCGTCGAATTTGTGGCAATCGATGG
GTCTTGACGCCGGCGATGGCGTGTAGGGTGTTGTGGGGGACGACCTTTCTATTTCGCCAG
ACATCAATGAGGTGGATGGTCTACGGTGAGGATAGGGGTGCTAGCATTGGGGTGGGGCGG
GAAGATTGTGTGCGAGCGGGATAGTGAAGAACTTTGCTAAGACGACTAAGTTGGAATAAA
ATTGAGTGGTTGGGGAAGTTTTAGGGGTGGGGTTATATTTACGGAAAATTTGGATTTCCC
CCTAAAATTCACGCTTGCTCCTCATATTTTACTTTTAGGAGATTTGCTATAGATCCTCTT
AGTTGCCTATAACAAAAAAAAGCAGAGTACACTCTTCGGCAATAGAGAAGAGAAAGTGAC
AAAAAAACAAGAGGGGGGAGAAAACAGAGTACTATAAGATGGCATTTCCCTGTTTCTTAA
GTTTCTCTGGAAAGAAGAAGCAAATCCAAGCATTAGTTGGTCCATTTCATGAATTTACCT
TATGGTTAAGTATCTAATAAACCATACTAATATGGGGAATGTAGAATGTCAGTACATATG
TTATACGTTGTACAAAAGATATTTTAGGTTGTGGATAAGAAATATGTGCATGTTCGAGAA
ATCCGGGGGTACTAGCTGAGATAAATTTTGAGTCGATAGCGCTTATGGGTCAAAGGAATC
TTGAATTTCCGAAATATGTTGAACAAACCATGGATGAAGGACTATAGCACACGAACTTTC
TAAAATAAACAGAAAATACTAGATAACCTATTTCGTATATGAAAAAAGAAATATATGAAT
AATATTCTACTTGCCTCTTGCATATGACAAAAATGAAAAAAAAATTGGGGTTTTTCAAGT
CTGTGTGCTATAACATGCCCTATAGTCATAAAAAGATGACATATATGCTGCATGTCGATA
TTTTTTGAACGAACTGTGCTGAAAAGGCATTCAATTCCATCATCATGTAAGACGGCACGG
ACGAATTATCATTCTAACAGAAAAACTCCACATCGTTTGATAGGAGCATGGTCACCCACC
CTAAGTAGCCAATAGCTAAGCAAGTGTGTGCATAACGCTAGCAAAATTAATGATATGCCA
TTTATAGAGTTGGGAGGCCACATGAACAAAATCAACCGAGAACAAAAGAAATCCCTTGAA
CCTTATGATAAATGACTGTCAGGAGATGGTCCATAGTAAGAGCAAGATATCATAGATATT
TCCATAGACTACATACCCATTTGTGAAAAATCATTAATATGTCGTGTATTGATAGATGGT
TGAAACAATCAACTATGATGTATGTAATTTATGAATTATTTATAATGGTCTCACATGTTG
TATGGAATATCCTCAATGACCTAAGATCCATATCAATAATTTCGATTAGGGTCATTTGCA
TTTCTGTCCCCAACTCGAACCACCTACTCAGATTTGTCCCTAGTTTTGAAACTTGCTCAA
ATTTGCCCCTTTGACGCTAGGTGTCCTTATAGAAATGCCCTTCGGGTCCGTTTACGTCCG
GTCAAAGGGTTTTGACCGTTTTCTTGACGTTTGCTAGACATTTATGATACACTCATGTCA
CACACACAAACATAACTTGAAAACTAAATAAAATTTATTAATTAATTGGCAAAGATAGCT
ATGCCTCCACATACATGACAATTATGAGTATGTTTTGGAGAGGTATAGTTGGTCATGGCT
CATCGCAAGCAGGTGAAACTAGATGGATATGTCTTGTTACAATGGTTTAGTAGGAGGGTA
AGGTCGACGGGAATATCAATAGTGATGACTCCAAGGAGGTCGGCCTTGATGGCAGTGCAG
ACACAGACAGCGGCATCAAGATCAGCCAACCCACTAAGAAGTGGACAACATTGCTCGGTC
TCCGGCACGTTGATCCGGAGCTTCAGTAGCAGCAACACATTGCTGCACACCGTTATCTTT
AATGGGTTGATTGGGCATGAAACACCAGTCGAAGGCGCTGGTGCAACAAGTGGGGTATGG
GCGGAAGGTGATGTAGGGACAATTGGTGGGTTACCATGCACAACAACACTGAGAAGAAGG
TTGAGGGCAAAGAAGAGGGCAATCTTTGTTAGCGCCATACTTAAGCTTTGAGCAAGCTAG
TTGGTGGTTTCTTTGGTAGAGGTGTTGTGTGAGATGTTTCTGTTTTGTGGTTCTTATATA
GTATAAAATTGAGTGGGTTATTTACGTCCCCCGGTATGTCAAGCAATCATTGATGACTCA
TAATTCTATACCATACATACCTTATATCTAGTATGAAATTATCATGTGTTTTCCAAGACG
AATGCAATATTTACATACTTCTTTGTTTAGTAACATCTATTTAGTTCAAATGATATAGAA
AGGAAGCATTTGCTTATTTCCTATAAAATTTTGATAAAGTAGGAAACTTATAATAACTCT
AAATTTGTAGGCATATTGGTGAGAAATTAATGAAGGCCTATCGTAATTTTGTATGGATAG
GAGTAATATAAGATTTCCTTCTACATTGATTCATGGTGTGACTTTTTCCCTATAAGAAAG
GTTGACTTAAATAGCACCTAAGATTTATAGCATTACTCAAACTACTACGTAATAGGTTGA
CGTTGGCGCGCACCAACATGTCGGTACGTTTCATCAACTAGTCACGAATCGGACGACTCC
TTTGTGTCCAGTTGAAATATCTTTGCTGTAATTTTTTTCTCCTGAGTGCTGGTTATTATG
CTAAGACAAAAAAGATAATTGAGCATGCGATGTATGTTCATGAAACAACTCTAACATAGA
CCCTTCTGGAATAATAAGAGGAATGTGATCGTATAACGACTGAGAACATGGTATATTATT
ATCAAGAAACTTTTGTGAGTTAAAATTTTGCATGTAAATGGTGTCATGAACTCCTCATAA
GAAGTTTTGTAAGAAGGGATTATTTTTAGAATGTTTGATCATGAGAGTAAATAGAGATGA
TGTCATTCCCGCATTATCTATTGTCGATTTTTTTGCATCACTATTTCTTATTATAATTTA
CTCTTTATCATTGATAATTTACACCATGTTACTCAACTTTAATGCCTTTCCCCTTCAGTT
TGCATGCAACACACATAGAGATGGTCATCGCAAAAAAAAACACATAGAGAGGGAAATTCT
TAGGAAATTACCGTACAACTGAAAAATAGGGCAAAACAACACAAGAAAAGGCATTTCTTC
TTGAGCTCCAAAAATTCTAGAAAGTTTCTTGAGTTTTTTTGCTAAGGGGGGCACAGGGGT
CCCATGGACGCCTTTCATGCGCACCTATACGAGTGGGGCATGTGGGCATTGCCTCTTGAC
GTCCATTGTCCATAAATTCCCTTCTGACCCAAATGTACACGCGAATTAATCGGGAATTGT
CGCCGCTACGAGGCGAAACCGAGGCAGGGCACTTTTGTCCTCCGACGGGGTGATTCTGTT
GTAGATCCATCCCTTACGGAGGAAGAACTTAAAGCCATCATCATCACTATCTTTGTGATC
ATTATCTCCATCAACATCTTCATCAGGACCGCCATATTCATCAACTCCCTTGACACCATT
TTTCTAATCTATGAACTTTTATGTGAGATCTTTTGTTGAGTATAGAGTGTGGTATTGATT
AGTACTTGTTGTTGATGCTTATAAACTTTATTGGTGAAATATTCAGATGTTCAAATTGTT
ATTCATATATTTATCTCCACTGATCATGATCCATATGATGTGTTATGAGTGGTCCGTTCC
GTTCTGAAGGGCATGTGATAAACCTTGTTGCTAGTAATCTTGTGAAGTTGAATCTAGTTC
TATATTTTGATCTTGTGTTGTCGTGTAATTTTCTAATGGTGATGTGTGAACGTGACTACA
TATCACCCCACTGTTAAGGGCCTAAAGGAGTGCATCATGTGATTAGTTTTTTCATGTATA
GGTTTCCGGAGTGACAGATAATACCGTACTCTAAGTTTATTACTGTTTTTGAGGGGTGTT
GGAACCCTAAAGTTTATTACTATGGTTAGATGGTATATTAATTTTTCTCTTATATTTGTG
GCTTACATAGAGGGTATAATTATAAGCATGTTGTTTGTTAAATCAAGAACGACACATTAT
TATAGGCTCCACCGCACAACAAACTACAAAAATAATGAACAATAACTCAATGAATCTTGA
TGAACGTAACTGAGTGAAACTGTTATGTGTCCTCGAGAATGCATTGATCCCTATAAGTAA
AACAATTGATTTTTAATTATAATAATTAAGGATTGGAACACTCGTTGCACCGTTTCACTT
TTGTTACTATTTGCTTTCCTGCGATTACTTGCTTTCAAACAAACCATCAAACCATTTTTG
CATCTTCTACAGTGAATTCTTGCTAGTTTCTATCAACCAATTCCTTCTTCTCCTCATTGA
GTTCGACACTCTTACTTATAAACTGCAATAGATCCCTTATGCTTGTGAATTATCAGAAAG
ACATAGTGAGTTAGTTATTTTATCAAAGGAGACCATAGTCCCCCATTTTCATTCAAAAAA
ATAGAGTCTTCTACAAGTAAGAAACAACTTGTTTCATACACCCCAAGAGATACAACTATC
ATACACCATGAGTGCTGACATAACTAGGGAAGATACATACCCCCTCACACCCAGCAGCTA
CAAACCTATAGAAGCATAACCACAAGTTGCTGAATTAAACTTAAACTAGAGACTTTATAC
TACCATACAGGAGAAAATAGTGAAACAATATAATAGAGCCCCAAATCACTTCCCTAGTAG
GCACATATCATCTTAACGCAGGCCCCCGACTATGCCCTTTCCTGAATACTTCACTCATCA
CAAAACAGGCATTCGCCCCCCTTTATAGATAAATGCAAACCGCACTGATACAAAGTACAT
GATACAAGGTGTTGAGGAAATTTGGTCAAAAGAAAAATGGACAAAACTAGCTGAGGACGC
TATCCGCCAACTGGTTGCCGAGAAGAAGCACAGGAGACCGTCACCGTGGGCCCGAAGGAC
CTGATCTCACCGGCGACGCCCCCAAGAGGGTAATGACGTGAAGCGCTGCCATCGTTGCGC
CAGGCGAGCCGAACTGAGGTTTTCGCCCTGAGATCCGGAAGGAAAGGAGAGGACCACGAC
GGGGCCCCTAGAGGAACACAACACCGAGAGGTGATGTCATCATCGGCGCCATGGTGCAAA
GCTTTCGCCCGGCCTCAACACCCACCACATTGAAGAAACTCCACGACAGGGACCCCATCA
CCATAAGTCAGGTGCACCAGATCCAGACCAGGGCTAAGCTAACATCAAGGACGACAGCTA
CACCAGGATCCTCCACCACAGCACCCATTGCCATCCTCATGGCCAAAGAATGTCGTCAAC
ACCAGCTACACCGGGGCTCGCCGAGAAGCCAACCAGTGTAGACCACCACCCGGGGCCGCC
ACCCCAGCATCCAAACCGCCTCCTCGCCTCTGCAAGTCCACGAGGTCCGCCCAAGGCCAC
ACCTTGGCATGGGTGATACTCGCATAGGGTCGGACCCCCGATCCACGTGACAAGGAGGGC
GCCGACAATGAGGGCCCGATCCCCACTGGATTAGCCCCCAAAATCGTCGAGGTGGCCAGG
GATGGGGCAAACCGGCAACACCCAGTTGCCCGCGTACGGGCTACCCGCCCATACGCCGCT
GCCGAAGCCGTGGCTCAACGCACAACCGAGACAGCAGGCCTCCATGGGCGGGACCTAGCA
TCTCCAGATCTGACCGAGGAAGGCCCTCAAGGCTCGCCGTCCCATGTCCCATGCGCCTCA
TCGGAGCTCCATCGGCCCGAGACGCCGCTCGACAGCCACCAGGCCTCCTTCCACGCTCGC
CCTTCCAGATATGTCGTCCTCCGAGCAGCCTGAGGCAACCGCCATGTACCCCAACCGCAA
GAAGGGCGGCTCGTGCCGCTTCGAAGAAGAAACCACGTCTGTCTTCCCCGAGCACGCCAC
CGCCAC
