Contig Data
morexGenes
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Map Locations of contig_38424 (5835 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map locationNo map location




Predicted Genes from contig_38424

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_53511 1 2761 bp MLOC_53511.1 Available Available LOC_Os02g02500.1, FRAME:+2, EVALUE:0.0, 13102.m00190 protein remorin family protein, putative, expressed
MLOC_53512 1 856 bp AK252461.1 Available Available None





CDS Structure of MLOC_53511






CDS Structure of MLOC_53512






Contig Sequence (5835 bp)

>contig_38424 5835 assembly3_WGSMorex_rbca.fasta
CTTAATAACAAATAGTCAATTTTCCCTAGCAACTGACAGTTTGGTTTTATTAAGACAACC
AACGAAAAAAAGTGGTTGGTAAGCCATCGGTGCTTGATCCTGTTGGACCATTGCCGTGGA
GTTTTTAGGGTCATCGATGCCGAAATTGCATAAATGCAGAAGAACTTGTAATTTTTATCA
TGCTCCTAGCAGAGAAGAATAAGATGCATCATCATTCATTCATTCATACCTTCAGATTTT
GTCATAGAAAAAAAATTCCGGAAAACGGTCAGTGGCAGTGAGTGTAAATAGTTCGGGAAG
AGAGGCCCAAAGCCGGCACCCCCGTCCCGTCAAACGGCAGTCAAAGTAGTACTCCCGAGT
CCCGAGCTTCAGCTCAGCTTTAACTGTGCCCCCCCATCACTCTCCCGTCCCCTCGCACTC
CCACGCCCGCCGCCGCCGCCGCCGCCGCAGATCCCCCTCCTCCGGCGCGCCGCCATGGAC
TACGAGCGCATCGAGAAGCCGTCGTTCCCCACGCAGGCAAGCACCCCCGCCCCCCGTCCT
CCTCCTCCCATTCGCGGCGCCATTGCTCGTTCTTTTCCTCCTCCTCTCTCGGCGGAGCTA
GCTGACGCGCGCGCTGTGCCTTTAACCAACCAGGGCGGGGGCTTCTCGCCGAAGCGGCTG
CGCGCGATGCTGCTGGGCGTGGAGAGGCGCCGCAAGGACGACGGCGTGGAGGGGCGGCAG
CAGGAGGAGGAGGAGGAGGAGGAGTACGGCGCGGTGCCCATGGCCTCCGTCAGATCCGAC
GACGACGCGCGCCGTGAGCACCTCCCCCATCCCCCGTCCCCCTCCACGTTCCCGCATTGC
TCGATTCGGAGCCATTTTATCCATCAATTTTGGGTCCGCTGCACTGTTCCATGATTTTCT
TTATGTGTTCTGTTCAGTTCAGTCAGTGCACGTTCTCCGTCTCTGGTTACCGAGGCAGAG
ATTGGAGTACAACAAGAAAAAGAAATATTAAATAATGTCTTCGGAGATCAGCAGGCACTT
CTCATGCCTGAATTAGTTGCATCAGAGGCTCGACTGAGAATTGGCAGGCAATGGTTGCTT
GAAAGCAGAGCATTTTCTTGACATTTCCTGTTCTGAAACCGTGGCATTGTTTTGATGCAG
GAGGAGGCAGCGTCTGCGAAGAATACAAGGACGTGGACGTGGTGAGCACGATGTCGGGGT
CTTCGTCCTCGCTGGACACCGGGAGCGGGCACCGGTCGCGGGACTCCCACTCCATGGGCT
CGAGGTTCAGGGTGCCCGAGGAGGACTCGTGCGATTCAGAGAGCGTGGCGTCCAACTTCG
AGTTCCATAAGGAGCGAGGGGCCTCCGCTCGGTCAGCGCCCACGGCGGTGGTCGCACCGT
TCTCCAAGCCCCCGCCGTCGAAGTGGGATGATGCCCAGAAATGGATCGCCAGCCCGGCGA
CGAACCGTCCTGGTAGGGCTGGTGGAGCTTTCCCAAGGAAGATGGAGAAAACTGGCTTTG
GTGGAGGGAGGCTGCCGCCGACGAAGGTTGTGCTGGAGGCCATGGAGGAAATAGATACCA
AGAGGATCGATTCGAGCCAAGAGAAGAGGGAGATTGGGTGGCAGAAAGCGGCGAACTGGG
CCACGCCGGAGCCCTATCCAGAAGTGGAGCCTTGTGCAAAGTCTGCACCTGGTGCAGAAA
GTACTATAATTGATTCAGCTGGTAAGTAGTGCACTCTTTATGCCACCATATTCATACCCC
AGCTGCTCCACTTCTCATAAAGTAGTTGGTGGTGCTATATGCCATCTGATCAATTCTTCT
GCTAAGATATGATTGATTGCCTCTTACCATTAGCTGAGTGGAGCATTAGAACATGGGGGG
CTCCTCACATTTTCTATATCACAATTCTTCCTGTATCATTCAAAAGCATGATTATTAATT
TGACAATGCACAGAGCTTGTTAGCTATCCAAAACTTTAGTGAACACTGAACATAATGCAT
GCATAGACGAATGCAGATAGTTTCTTTGTTTGTTTACTTCTTTAGATAGAGCCCTCAGGT
GATGCAAGAATATGAGCAAGACTGTCCTTGCCAGATTTTGTGATAGCATAGTTTCATCAC
TCTTCCATAATTCACCACGTACATGGCTCTACAGTACGTTTAGCTTCATAATTCACCAGC
TAGCCTTGATGAATCAACTATTGTATGTCCAACTGTTGATTCAGCTTGTATGTTGTGGTA
TGTAGATGAGAACTGACGAACACCTTTCTCCCCTTTTCCAATCTATTTGCATACTTTCTA
TCTGGAAAGTATAAAAAATCATGACATGAGTGCATAATTTTTGAATTTGTGCAGTTACTT
TGAGCTGTGATTCATCTACCACACTTCATAGTGCCACTGCATGCATACCTCCCCCACCAA
CAGGCCGGTCAGTATCGATGAGGGACATGGGTACTGAAATGACCCCAATTGCAAGCCAAG
AACCATCCCGGACAGGAACACCTGTGAGAGCAACAAGCCCGGATTGCTCTCGGCCAACTA
CTCCACGAAGGACATTGGGTATCAATGCAGCTGGCGGTGTTATCAACCGCGGTGAATGTA
GCAATGCAGATTTAAGCGAAGAGGAGTTGCAAATGAAGACTAGGAGAGAGATAATGCTTC
TTGGCACCCAACTAGGTAAAACCAGCATCGCGGCATGGGCAAGTAAGAAGGAAGAGGAAA
AGGACGCATCACTTTCTCTCAAGACAGTGTCATCAGACCAATCTGCACAAAATGCAACCG
AAATACGTGCAGCTGCTTGGGAGGAGGCAGAGAAGGCCAAATACTTAGCAAGGTGCTAAT
ACCAAAGTGTATGTCTCTGTCCAGTTAAAGCGCTGGGTGCTTGGTGACTGATTATGTTCT
GGCACTTATTCTGTAGGTTCAAACGAGAAGAGATCAAGATCCACGCATGGGAAGATCACC
AGAAAGCCAAAATCGAAGCAGAAATGAGAAAAATTGAGGTTGGCTTTTTTCCTGCAGTCC
AATTTCAGATTCATTTTTTCTGTCCGAGTTTTTCCGCAGAAAATGTTCATTTTACCACTT
GATTTCCATGTTGTATAGACATGAGAAAAATCCTACATTGGAATCAACTAGTGTGTACCC
TGTTGGTACTATACATCATGTTATGGCACATGGACTCCTTTGGCAGACTAACTTCTCCAA
CATTTTTATCTAAATTCGGAGCACATCCCTTTAGATTGTGCTCCCCCCAGCTTAGCACAG
AGCTGTTTATATAGTACACTGAATTATTGGTGGCAGCACATCCCTTTATCTTGGATTTGC
AGCATTATCGTGCTCAAAACAGGAAAGGAGTAGGATAATGCTTCATTTCCGTTCAAAATA
TAGCACAGGATTACACCTAGCTCCACTTCATCAAAATTTCTTACACAAACCATTTTCTTG
CTGTCGTTTGGATATGCCATAGCAACTCAAAAGTATCTTCTGTTTCATTTCATCAAAAAT
TAGATTTACTAACTCAGCTTGAGTTCTTGCTGCTACAACTGCTGTTATTTTGGTCAGATT
ATGCTGTATATGCGCCTGTCTTTCAGAGTGCACAAAATCAAATAGTGTGAGACTGGGGTG
TCTTTTCCTTTTCTTTGTGGAGGCATCATCTTTCCATGTCCATGTTTGTAATAGACCCAC
TGTCCATATTAATGAGTCTACAATGGTTTCATTGTCTCAAGGTCGAGGTGGAGAGGATGC
GAGCCCGTGCCCAGGACAAGCTGATGAGCAAGCTCGCGTCCACAAGGCACACTGCAGACG
AGCAGCGAGCTGCCGCAGAGTCGAAGAGGGACCAGAGCGCCGCGAGGACTGCAGAGCAGG
CAGAGCACATCAGGAGAACCGGCCGGATGCCGCCCTCGCTTGGCTGCTGGAACTGGTGCT
CGTAGCCCCAGAAGAAGAAAACAGCATGTGTTGTTCCTCTCAACTGGTGAAGGAAATGAA
TCTGGCATTGTAGAAACTTCTTCTCTTTTGATTGGTTCAGTAGATATGTGACACGAGAAC
AGATCACCTGTGTAACTATGTATATGTAAGATGTGAGCTTTCTTCTTGCCTTGTGTCATG
TTTCTTCCATTCTTCAGTGATCCTGAGATTTCTGTTCAGATCTATATGTACATTACAGCC
AGTGATTTGCTTCCAGATGGGATGGTAACAGGACCTGAAGCATTCATATGTTCAGGATTC
ACCATTGGGCATAGCTTTCTAGTGGTTGAGATCTATAGTAGTATAACACAGATAAACATC
GGCAAGTGCTCAACTCTTTCCTTGTGGAGAAGAGATTGTAAAGTACAAGCAGAGGCCAAG
GAGATAACAATTTTTCAGTCTAAAACCAAATTCTTCCCAGGTGACCAAAATCACAAGATG
GTAGCAACAAGGTTTAATCAGCTCCGTCTTATGATCATCTAGATTAAACAACAGCTACAA
CATTTTTCACCAAGACAGCATAGCAACAAGGTTTAATCAACTCCATAGATTTGAGAGTGA
CACTGCTCATGTCTTATGATCATAGCATAGGAGGAGACAATCTGAATCTGAATCTGAAGA
CTAACACATGACCAAAGTAGGCTACCAGTAGCTAGGAGTACTTGTTGAGACTGATAAATG
ACACATAGTCTCCATCTCCATCAAGTCCATTCGAGGAACAGGAGCAAGAAGAGCAGACTA
CTCGAACTTCTTGATGAGGGAGAGGTCGTTGAGCATCTTGTCGACCCTGTCGTCGCTGTC
GAACCTGCCGCCGGGGACGAGGGAGGGCACGAGCGCCTTGGCCTCGTCGGCGGTGTCAGG
GCAGAGGTTGCCGAGGGTGCATAGCTCGAACTCGACGAGGCTGTAGCGGGAGAGCGTCTC
GCGGACCTGGCGGACGGCGTCGGGGTTCTTGTAGCGGCTGAAGCGCTTGACGTAGGCCTG
CGACTTCTCGAACACCTGCGAGACCTGGTCGGCGCCGCCGTCCGACATGTGCTGCAGCTG
CTCCCACTTGTGCTCCAGGATTATCGCCACCTCGCAGTTCATCAGGCACTTGGCCTTGAG
AAACTCTGCGCACGGATAACAAGAGTTGGTCCTAGGGTTAGCTTGGCGGATCTAGCGGTG
ATGAAACCCTAGGTGGGGTGGGGACGAGCGGAGGAGGGAGAGGGACTGACCTTCGCCGAT
CTTGAGCTCGGCGGCGTTCTCCTCCTCCTCGCCGGACATGGCTGCTGGCGCTGGGTTTGA
TCTTCTCCGGCGGCTGCGGCGGCGATTCGGATCGGCGTGGCGAGAGGAGGGGACGGGAGT
GGAAGAGGAAGGGGGAAAGAAAGGAGGGAGGCGGCGTCGGAGAAGACTGGGCCAGGCCGG
GCCTGGGTCGCGGATCTAATTCCTCAACGGGCCGGGTTTCCATCGACTAGAAGAAACCGG
ATCCCATCACACCGACGCCCCCAACTACCCTGGGGTTTCTGTTTCCTCCTATTTTTTCTC
TTTCAACGACTGCAAACTACCCATCTACAAATCCAAGAAATTTCTTCATGTTGTTTTCAA
AAGTACAATGCTGACACCAGCTTGATTGTACTAGTAGGCTTGCACGTGCAAATGCACGTC
TAAATTATTATAGGTTAATTATGATGATATTTATCTTCATCCATCCACGTGGTGGATATA
TCTAGATCAGAATGGATTCTTTTGTACAATGACGCATACATTGTTACAGATTGTGTATGT
GTACGTAAGTCTTGCTACAGATCATACATAGAAAATCATTGTGAAATGCTATATAGCATC
AGAAAATGAAAAATGCATCTGACATGTTGCAAGGTATATAGTTTTTTTATTATAAAATGT
TCTATAAAACGGATA