Contig Data
morexGenes
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Map Locations of contig_38423 (4838 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map location




Predicted Genes from contig_38423

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_53508 1 107 bp AK363899 Not available Available None
MLOC_53509 1 261 bp MLOC_53509.1 Available Available None





CDS Structure of MLOC_53508






CDS Structure of MLOC_53509






Contig Sequence (4838 bp)

>contig_38423 4838 assembly3_WGSMorex_rbca.fasta
GGGGGGGGGGGGGGGGGCTTGGGACATGGCTGGGCCGTTTTAGAAAAAAAAACGTTGCCG
AGCCTAAAAAAGATGTCATGGGTGTTGGTTGGGGGAGGGGGGGGGGGAGAGATGCTCTAG
CTCGGAAACCATCGCCACACGGAGAAGCCACCATGGAGAGTCACACTTGGTTGGAAGGTC
CCGAGAGCATTCCCTGAGATATTTCGAGTGAACCGTTGACAACTATCAGATTTACCCTTA
CCGACGTGGTGATACGTACAGGATAATTTTCATGTAGACAATGCATCGTGTAGATCATTT
CAGCAAAAAAGAATCGTCTTACTCTTTCCATTCTGATACACTTTGCCGTCTACTCCTTAT
ATATATTACTTAAATAACTATAGTTGGCAAGAATTAGTCTAGTTTTTTAACTATAATTAT
TTTTAGATATAAAGAGAGTATATGTTAATGTTGGTTAGTTGCATGGCCTACTCGGCTCCA
ACATTGTAATCCTCACGTGTGCCATTGACGGGGACGGTACCAACAACAATATTATTAGGC
GATGTCCACTAGGAAAGACTATCGTTGCCTAACGTTTGGCTATTTGCCGGGTGCATTTTA
TCGCGCACGCGGTAAACATTGCTTTTAATTACCAAGTGACAAGAAAGAAAATACTCAACA
AAATAGTAAACCTCGGTAAAACCTTTGCCGAGTGTAAATGATCCTTCATTCATCGAGTAC
TCTGAAAGCTCAGCAAAGAAGCACATTCCCATCAAAGGTTGAGCTCGTGCGTCACCAAAA
AATAAGATCAAATTGATCCGGCCGCAGCAACGACATCAATTAATTAGCAACGTACGGTTC
ATGCACGAGCAAAGCTTAGCCCAACCAGCTAAACAACAATGTCGTCGGCAGCAGCGGGGA
CGATGGGTTCCCTGCACAGCGGGCAGGTGCTCTTCTTCTTCATCCACGGCGCGATGCAGC
GCCGATGGAACACGTGCCGGCACGCCGGCAGCTCTCCCCACTTCTCCCCGACCGTCAGCA
CCCCAAGGCAGATCGCGCACACCTTCTCAGACGCCCCGCTCCCGCCGCCGCCCGCCGCGG
TGGAGTACCGGAAGTACAGCAGCCGCCGCGGCTCTCGTCTTCGGCCCGTGGCTGTGGCGG
CTACGTTCTCCGGCGCTGGCGGTTCCGCCGGTTTCCGGCACCAGAAGATCGCGCAGCAGA
GGAGCGCCGACACGGGCAGCCAGAAGGATAGGCTGACGATGAAGCCCACGAGGAAGGCCA
TCGTCGCCGTCGTTCGGGACGCCGAGAGATTGCTTCCTTAATTTGGCCGAGGTATATGAG
CAGTAGCATGTGCCCTAAAATGACCGGAAGGCAATGCTTTTTTTCTTCTCTTCGGAGTTT
TGGAAGGTATATGATTCATCAAAAAATTATGGTAATGCAAGCAGATTGATCGGGTACTTT
GACGCATCATGCCATCTTGCGTACTCCCTCCGCTTCAAAACTAACCAAGCCTTGTAGTAT
AATTGTAGTACCAATATATACAATACCTAATCAGTTCATTTTAGACACTTTATTTATAGA
TCTTAACATATCTTCTCTATAGACTTGGCCAAAAAACATTTTGTACGAAAATGACTTTGA
TTAATTATAAAAAGCTCACTTGAAGTACAAAGCAAACCAAACATAACAAAAAACTGCATC
AAGAACCCTGGACCATCGAAGGACCATTACGACCGCCAGAACGAACCGTCGACGCGCCCC
TATCGCTGCTCCGTTACTGGAGGTAGCCCGGCCTTATTGACGACAACTAAAAAGTCTTTT
TTGTATGTGGCCCTAAGAATCTGCGCCCCGACCACACTTGTCACCATTGGATCCTTCAAT
TTATTTGAAGTTTCTCACACAAAATCTCATCATCATGCATGCATGCGAGAAACTCTAACC
TTGCCACCTCAAGGAGACAACAATAGTCTATGATAGAGCTCCTTCGACTCTGTCTCGCCG
GACGAACTCAAGGAGGAACCGCACCCGAAAGACTATCTTGAACATGAAGCGCTGCCCCGC
GAGGAAAACAATCATAATAAGCTAAACAATTAGCCAAAGTCGAGGCAATGGGATCTCCCC
CCCCCCCTCCTCCCCCACACACGCACCCTATCGCTGGTTGCCAAAGCAACATGCAGAGTG
AGACGGATCCATTGGCTTGCTGACGAAGTTCGAAGAGAACGAGTGCCCTAGCCATTCTAG
TTGCGAGAGGGGAAGAGCCATGAAATGCTTTTAGAATTTATCAAACTGAAACAAAAAAAA
ATGCAGGTAAACTAAAACAAGTTGACTTGTACAAACATAGAACTTCAATTAATTTGAAAC
GAAATCTCTGGGGTTTCGAGGTCAGTCCTAAAAAACTCAGTTTCAGTGGCAACCATGGTT
GTTTCCTTATGTGGAAAAGACTTACAATGAGCGATTTAACCGTATTTTTAGGACCCCAAT
AGCTGATGATCACCTCAGGGAAGGCACCAACGGGGCGAACAAACTTTTGCTCAGGGAGGT
TGATTTCAATGAACCAGTGCCCCTCTCTCGTATGTTAGATGTAGTGTGATTCCAGTGTGA
ACCAGTTGGCCTAGTAAGCGTGCGGGAAAGAGCGGGCTAGACCAAATTTTGTACTTCTTG
GCAAAGAAAATGGCATCAACGGAAAGAAAAACTAATACACAAAAAGCAGAGAAACTTACA
TTTAAAATATTATGCTATACTCTTATGAAACTGTCATCCTGAAATTTAAAATTTAACCAT
GGTATATTGAAAAAATGTGGTGTGGTATCTACAAAAAAAGTTTGTCATGATCTAATTTGT
AAAATAATATAATTGGTCCAATGGCAACTTCAACATGAAAAGAAACTATATTATCTAGAC
AAATACAATATATTTGACATGGGCCATATACAATTATTTTTGTGTACAAGGTACAAAATT
GTCAATGGCTAATTAATAAAACATCAACAACTGAAAATTTTCCTTGGCCTAATTAATAAT
ATTACCATGGTCTAACTGAAAAAATTGCCAGGGTAAAAAATAATGAAAAAATTGCCATGA
TGCCTACAAATTTTTTACCATAGTCTAAATTGCCATGCCACGGGCAAAAAAATACCATGG
TATAGACAACTAAATTGTGATGGTACCTACATCATAACTACCATGATGTAATTAATAAAA
TTGCCATGGTTTAAATAACGAAATTGACATGCTACCTATATTAAAATCGCACATGGAAAG
TTTAGAATTTGTTTAGTCTAAAAAACATGAAAACTTTTCGGATTTGTAATGGGTGCATGG
CAAAAAAATACAAAATTATACATGGCAAGGCAAGAAAAATGATTTTTGAAAAAAGAAGGC
AAATTTTGTGATTTATAATGCACACATGGCTAAAATTAGGAATATAGTTCTTTCAATGAT
GTCAATTTTTTTTGGAATTTCCAGTTTTGTTTGGGCCAAAATTTAAGCACATATAGCAAG
TTTAACCAGACATATTCACTGTATGGCACCAACCTTGTGTTGTGATTCATGCCATGAGAT
GAAACGACAACCAACACGTTCGCTGTGAGGGGCGAAAACACTGACATCAACTAAATAAAA
ATTCAGTTTTTATACAGATTCATCTTCATTTTTGGGGGTTATTTTCTCTTCCATTTTTTT
TTGTTCTACTTCTTCTTGGGTTTCTAGGTCGGACCTGAAATCTTCGAGTTCCATGGCGCA
AGTGCACTCACGTTGGCGCTATCTCTCTCTTTTTTCTACCCCTCCGTTCACTATTATAAC
ATGTTCCAATTTTTTTTCCTGAATCGAATGTATATAGATGTGTTTAAGTATATTTGTTCA
CTCATTTCAATCAACATGTAGTCGATACTAAAATATCCAAAATGTCTTACATATTAATGT
ATGGATTTTTTTTTATTTTTATAAATTCTGTCAGAACTAGCAACACTCTGTTGTGGCTAT
AGCACACACATTGAGCGAAATAATGTAATACTATCTTCATTTATCTTCACTTTAGAGAAA
TGGATCTATTTTACCCGCAAAAAAAAGAAGAGAAATGGATCTATTTGTTCTTAAAGGCCA
AACGTCTTTCACTACCTATGTGGGCATTTTTCATCGTGTACACATGGATATCTTTGATGG
ATGGGATATCTCAAAACCATATGAAACATTTCGTCTCGTATGGTTGGTGCAGCTACGCGG
ACATTTTTTTTTGTTTAACTATGAGAATAACGCAGCTCCTCTCCCGTGTGATACATGAGC
ATCCACATTTTCACTCGGTGCATACATTCATCCAAATTCAAATGATGGACTTGCCAAACC
GAGACAAATCGATGTATTATATTTTTACTCTTTTTATAGGGGATATCATATTTTTACTAA
ACAAAAAAAAGAAAAGATGTACAGAGGGGCCTTCGTGGGCCGAATCTGGGCGAGCGGCCC
GGCCTGATACGAGCGATGCGTAGGGCGGGGGGTGTCCCAAACCCCCAAACGCGCATCCCT
CCCACCACCGAGCCGCCGTAGAACGCCGTACCTCCACCACCACCCGCGTCGCCGCCGTCG
CCGTCGTCGTCGCCCGTCCGTCGGGGCATCGCCGCCGCCGACGTTGCCCGTTCGTCCGCG
GCGTCTGGCCACCGAGGCTTGAGGTACGTACGAGCTTGTTTTTTATTTTTTTCATTCAGC
CCAGCGATTAGTCAAATCACCTTCAGGACTCGTCGGCGCGCAGGTCCCGCCGGCCGCAAC
CATGTGCGGCATCCTCGCCGTCCTCGGCGTCGGCGACGTCTCCCTCGCCAAGCGCTCGCG
CATCATCGAGCTCTCCCGCCGGTAACACGCCCCGCCGT