| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
| No map location |  |
 |
Predicted Genes from contig_38394
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_53473 |
2 |
1376 bp |
MLOC_53473.1 |
Available |
Available |
LOC_Os01g12830.1, FRAME:+1, EVALUE:9e-157, 13101.m01401 protein erythronate-4-phosphate dehydrogenase domain containing protein, expressed |
CDS Structure of MLOC_53473
Contig Sequence (7341 bp)
>contig_38394 7341 assembly3_WGSMorex_rbca.fasta
TTGTAGCGTGAAGGGAAATAACAGCCAAAGAAGTGATAAANNNNNNNNNNNNNNNNNNAT
GCAAAATGGACGTATCATCAGCCACCAAGTTTTGTTGACCCTGCTTGGCCACATCATCTG
TGTCGTCTTGTCAAGGACATCTATGGTCTGAAGCAAGCTCCTCCTGCGTGGCATGCACGA
CTTGGTGCTGCTCTTCGTGCACATGGATTTGTGCCGTCTACAGCCAACACGTCTCTGTTC
ATTCTCCAGCGACCTCAGGTGACTATGTACATTCTGGTCTATGTGGATGACATCATACTT
GTCAGTTCGTCGGTCACTGCTGTAGATCGGCTCGTGTCTTCTTTGGGTGCTGATTTTGCT
GTTAAAGATCTTGGGAGACTGCACTATTTTTTGGGTCTTGAGGTTATTCATTCTGACAAT
GGCTTGACTCTCACTCAGGAGATGTACTCTTAGGATCTATTACGCCGTGCAGGTATGTTG
CAGGGCAAGATTGCTACGACTCCTATGTCTGCCACAGAAAAACTGTCAGCTCTTGATGGA
GATTTGCTCTCCCGTGATGATGCCACTGAGTACGACAGCATTGTTGGTGGTCTGCAGTAC
TTGGTCATTACTCGACCAGACATATCATTTGCAGTTAATCGTGTGTGTCAGTACCTTCAT
GCACCACGTGATCCTCATTGGTCAGCTGTTAAGCGCATTATGCGCTATGTTCGTCACACT
GGCTCGTATGGTCTCCATTGCAACCTGCGTCCTCTGGTGTGATCTAACCTTTTTATGATG
CTGAATGGGCAGGCATTCCTGATGATCGGCGATCCATGGAGGGACATGTTGAGTAGAAAG
CAGTTGCTAATGCCACAACTGAGATCATACGGGTGCAGTCATTGCTTAGAGAGTTGAAGG
TCTCTCAAGCTCAGCCGCGTGTTCTTTGGTTTGATAACATCGGTGCCACGTATCTTTCAT
CGAATCCGGTATTTCATGCCCGAACGAAACACATCGAAGTTGACTACCATTTTGTGAGGA
AACGCATTGCACAGAAGCTACTTCAGATCAAGTTTGTTTCTTCTAAGGATCAACTTGCTG
ATATTTTCACTAAACCCTTGCCCTTACCTTCATTTGAAGGATGCCGTCACAATCTTAACC
TCCTGAGTGTTCCAGGACAATAGTTAAGATTGAGGAAGGGTGTTAGACTAAGTATATAGT
AGATATACATGTTGTAATACAAAGTTGTACATGTACGTTTCCCTCGTATAAATACATGAC
AGTCATACCCGTTCAGGGTATCGAGCATTGCCCAAACCCTAGTATGTCTTACATGCATCC
ACCCCTAATATAGACCAACAGATTGTTGCTTTCCCCTACGATAGACAAGATGAAACTTGC
CGTTGGCGGCATCGGTGCTTGAAAACTCCTCTTGCGGCTGTTGCTTCCTTCCACTGGGAA
TTGACTAACCCAAAATTAAAATCCAGACAACTGATATCTAACTAAAGTGATGACATAAAC
CCTAGAGAATTAGGTCAACCTATAAAAATCATATCTACCTTCTCATCCACATGTGCTCCA
CGCCCAATGTATATGAGTACCTTTTTTGAGGTTTAAAAAAGGGAAGACTAAAAATCTAAC
GTCAGATTTTTAGGCATGAAAAATCTGATGTTTTTCATGGCAATTTATATTAACACGATG
ATGTCAAATTTAGTGTGCAAGCACAACAATTCTTTGACAAAAAAAATGAACTGAGGCGCT
TGTCATCCTCGTCAACTAAACTCGACATCCTCCAAAAACATAATTTGTCACGAAAAAGCT
TTCGATTTGTCATAGTAAAAAAGAAAAACTGACATCAGCTTGTATAGTGGAGTAAAAAGA
AAAAAATGGTCCCTCGAACTCAGTAGAAAATTACGCTGGCTGATTCAACCATCCCCTTGA
ACTCAGTAGGCCGCCCGTCCTTGTCCGGCTCGTCTACAACCTGCGGCCCAGAAAGAAAAA
TCGCTAGCAAACAAGGCCGGCGCGGAGCGTCAGCATTTCCCCACCAGTCGCTACCGCGGA
GCAGCCCACCCACCACACAACAACCAGCCGCTGCTGCCGCCCTCGGTGCCCCCGGCCGCC
ATGGCGATGGAGTCCCTGGGCGTGCTGCTGCTGCACCCCATGAACGCCTACCTGGAGCAG
GAGCTCGACCGCCGCTTCCGCCTCTTCCGCTTGTGGGACTCCCCTCCCGACGGCCGCGCC
GAGTTCCTCCGCGCCAACGCCTCCGCCATCCGCGCCGTCGTCGGCAACGCCGGCTACAAC
GCCGACGCCGCGCTCATCGACGCGCTGCCGTCGCTCGAGATCGTCGCGTCCTTCTCCGTG
GGGATCGACCGCGTCGACCTCCCCAAGTGCCGCGAGCGCGGGATCCGCGTCACCAACACC
CCCGACGTCCTCACCGACGACGTCGCCGACCTCGCCGTCGGCCTCACCATCGCCGCGCTA
AGGAAGATCCCGCAGGCCGACCGCTACGTGCGCGCCGGCTTGTGGAAGGCAAAGGGCGAC
TACACACTCACCACGCGGGTTGGTTTCCGATGCTTGCCTGTTGACTTCCCTTCATATTTG
TCAGTCCAATAATTCAGTGCGTTCTTAGCTATACTTGATTTATTGCCCACTAACTGTGTT
TCACGATACTTCTGCCTTTGGTTTAATCGCAAACAGTGTACATTTGGTATCGTTTCAGTT
AAAATGAATATGGCAATAACTTGGTTGGAAAATGAACTATTTAACATAGGTTACATAGCA
GTGGGCATTCAGGGAACATGAATGCACCGAAGGAAAATAGGCAACACAGAGGTTAAATTG
GAGAACAAAATCTAGGTGGTAGAAAGGAGAAACAGTTGAACTTTATTGGATCCTTGTCAG
GTTTTTTTGGGCACATCATTGCTTATCTTCCTAAAAAAATAAAATTGGACAGAAATATTC
CTAAAATCTTGTTGGTAGTTAGTAACTTGGTACATTTGACCCTCTTATATGCCATGTGTC
TCATATCAGTGGGGAAGCAGTGGTTCGAAAGCATTTGCAGTAACGTAGGTTGCGACTATC
CTTAGTTTATGCCATGTGAGTCATATCATTTGAGGAAGCAGTGGTTCAAAGGCTTTTGCA
GTAGCTTAGGTTACAAAATGACAGTCTCTTAAGAAACTGTTCAGCCCTGATGGATTTGTT
TCAGCAGTGAAATGTATCCTATTCGATCAAAATTTAGACTACCTAACTGTAAAATGCTGA
CCTTCTTTATTGCTTATTCAAGCTGTATGCTGGTGTCAGAAAACTGAAATATAAAATGCG
GAGGAATCGCATAGTTATAGTGTTATAGCCGCAGGGATTTTTTCTAGAAATCTAGCGAGC
ATTGTGATTTAGGATGGCTCACATATGGTGATGTGGTTCCTATCTTCTCTTCTTTAATAT
AAACTTCTTACTAGGTTAGGGATTTATTATTTTTTTGGTTCTTCTTTCGACATATTCACA
GGGCTCTAGAGGTTTTATGTTATCACATAGCTCCATATTGTGCTATCAATTGGAATCGTG
GTAATATTAGAGCTGATGGATGATCAGAAAACCATGGAAACCATAATTTGTTCCTCCCTG
ACCATTTTGTAGTAGCACAAATAGGATTCTTATAGCAACACGTTTCGTCATGTTCTCCAT
TGTTTTATGGCTCTAAGTGAATAGTTTGTGCATCATACCAACCTAGGCTTCCATGGTAAT
ACACACCAGAACTTTGTGTGTGAATTGTAATGCGCAATATGCTTCTGTCACCGTGCCATT
TCCCTGCCCCCTTAAAGCATTGAAGGACATCTTCGGTATGAGTGGAATCCCGTTAAACAA
TACAACACGTTCTGGTGCACTTTTGGCTGCGTGCATCAATCGATATGGAGACCGGGGGTA
GCACCTGCATATGAAAAGAGGGAGGAGAGGGAGGGAGGGAGTTCAGATGCAGCTATCTCA
AGGAGAGAATGTGTTTTGCAAGATTGATCTGCTACTGATTATAATGATGAGATACCAGCC
TAGATTGTCCTATGAAAGCATGAAATAGCTGACAATGCTGTCTATCATTTTGTGTTAGAT
ATAAAGGTTGGGGGTGCATGTGATCCTAAGAGTAGATTCGGTTTCCCCAAAGAACAAAAG
ATAACAAACTCTCGTTATTTTTCTGCAGTTCAGTGGCAAAAGAGTTGCTATTCTTGGGCT
TGGCAGGATAGGCTTAGCCGTAGCAAAAAGAGCTGAAGCTTTTGGTTGCTCAATCAGTTA
TCATTCAAGATCTGAGAAGCCATTTCCAAACTACAAGTTCTTTACAAATGTTGTTGACCT
GGCATCCAATTGTGACGTGCTTATTGTAGCATGTTCGCTTAGTGCTGAGACCAATCACAT
TGTTAATCGTAAGGTCATGGATGCACTAGGACCAGATGGTGTGCTCATAAACATCGGGCG
TGGAGCACACGTGGATGAACCTGAGCTTGTGTCTGCTCTTCTTGAGAAGCGCCTTGGAGC
AGCAGGCCTTGATGTGTTTGAGCACGAGCCCTTTGCTCCAGAGCAACTTTTCAGTTTAGA
TAATGTTGTTTTGGTCCCTCATGTGGGAAGTGATACTGAAGAAACATGCATGGCAATGGC
TGACCTGGTTCTAAAGAATCTAGAGGCACATGCTCTTAATAAGCCCTTACTCACCCCAGT
CATCTGATTGTTACTGGGATGCCCAGATGTTAGCAGTTTGTAATCCAAACTCGAGTTTTT
TTATGTCTAGTTTATCAACCCAGCATTATCTAGCGGGTTATTGTTTTTGAAAGACATCAA
TGTTATGTCTGTTATGCAATCAACAACCATGATAAATAAGATCACCAGTTTTGGAAGTTT
ACAGTTCCATGTATTTACAGAGATATTTGCATCTGCCCCTCTTTACTTGCTGGTACCTTT
CTGCATGGTCGAGGCATGCAATGTCGGCATTTCGTGTTGGATCCTTTTTTTCTCTTATAT
TTCCTTGTTTATGCAGATAGAACACTTGTGGTTCGTTTTCCTCATAGATCTTGTTTATCC
TTTTGCAGTTCAGTGGCAAAAGAGTGGGCATCATCGGGCTGGGCAGGATAGGGCTAGCCA
TTGCCACCCGAGTGGAGGCCTTTGATTGCCCTGTCAACTACTACCAGAGAACAAAGAAAG
ACTACCCCAACTACACCTATTACCCCAGCGTGGTTGAACTGGCAGTAAACAGCGACATCC
TGGTGGTGGCTTGCCCGCTGAACGAGCAGACCCGGCACATCGTCAACCGCGAGGTGATCG
AGGCGCTGGGGCCTAAGGGCGTGCTCATAAACATCGGTCGCGGCCCTCACGTCGACGAGC
CTGAGCTGGTCTCGGCCCTCGTCGAGGGGCGCCTCGGCGGGGCGGGCCTTGACGTGTTCG
AGGACGAGCCCAACGTGCCCGAGGCGCTGTTCGCGCTCGACAACGTCGTGCTGGTGCCCC
ACGTGGGGAGCGGGACGCACGAGACACGCCAGGCGATGGCGGACCTTGTCCTGGGTAACC
TGGAGGCGCATGTTCTGAAGAAGCCGCTGCTGACTCCGGTTGTCTGATGATCTGATGATC
AGGATGGGGCACTTTCGTGTGTTGTATATGAAGAACCGAAGCACGGCAAAGATGTTTTCT
TTTCCGGGATCATAATGAAATCTGTTGTCGTCGGTCGGTAAACACTCGACGAGAATGGAA
GGTTAATAAATTTGATTTCTTACTGGGATAGTTTCGTCATCTGCCGATGCCATGTATGGT
ATGCCCGGCCGGTTTCATTGGCCAAGGAAATGCAGCAGTGTCTCGTCGTGGCAGCACAAT
GGCTCGAGCATTAAACGCGCACGTACCGAATAGTTCACGATGGCCGGGTGAGAGGTACCC
ATTTCACATTTTAGGATCCGGCGGTACTGTGCTATCCTCACCGAGGTGTCCGATCTATAC
CGTCTGATCCTTTGAGAGGTCGCCATCCCGGCACGCGTGATGCGCTGCACGAACGATGGA
TCCATTCAGATGTAACTGCGGCAGATGGATGCAGTGGGCGGTTGGGCACGTCGCAAGAGC
TAACAACATACATACATATTGCATGCATTGATCTTAGAGCGGCGGTACATGACGTTAGTA
CTTCCTCAGTCACGGTTTAGAAGGTGTGTATGGAAATTCTTTAGAACCTAGGTGGTTATT
GATTGGCTGTAAAATGAGTTAAAAATAACATTCACACTACGCATGTATATAGAAGTAGTA
CGACGAAGTACTAATTAGCTGCTAGGAGTAAGAGGGTGTTTGGATACGTTTTAGTCCCGT
GACTAAAAGTAGTGAGACTAAAACTTGCTAGCCTCACTCATGTTTGCATTCAAATACTAA
AGAGACTAAAATCAANNNNNNNAGCATTTATTATCCTCCAAACCCTTCAATCCAGAACTC
GCATGTGTTAAAGGAGATGAGTTAAATGAGGAGAGAAAGGACTATTCCACATTTTAGTAG
GGGTACCCTGACTAATTTTTTTTAGTCTCAAGACTAGTTTTAGCCCCTCTTTAATCACGG
GTGCTTGGAACTTTAGCCTTTTAAAAAGACTATTTTTAGTCAGACTAGTTTTAATCCCTT
GAATCCAAGCACCTTCTAAATGCAATGCGCCTTAAACCTTGTGTGTTGTGGAAATACACG
CAAACTTAACCGTGCCTTCTAAACCGTGACGAAGGTAGTAGTTAAGTTTTCTTCTCCGCT
ATACTATTTGGTATGTGTCGAACGTTGCTCGTCATGCTTTGTATCCAGCTATATTTTGAG
TCAATAAAAATGGCCTTTGTCGAAAATACTATGGTATGTGTAAGTGTACCGTGTATGTTG
TCGACGTACGGTGGAGGAATCTGCTGCTCGGCGAACCCCCCACGTTTCCCTGACCGTCCG
TTTGCAATTCGCCAAGCTCGTACCCCTGTCCGGTTGCTGGATCGTAGCTCGTCTGCTTTG
CATTACGGCACGGAGTCGCGGGAGTGAGAGAGCAGGACCAGCACTATGCAGTGATTGTAG
CTGTCCTCCGCGACGAGAGACTGATGGGCGGCTCCTCTCCGGCGGCCGAGAACTGAAGCT
GCGCGGTGCCCACTGACGGCAGCCGGCCGGCGTGCTGCCTGCGCCTGATGCCTCCGCCTC
CCCCGCCGGGGGCCCCCTCCCTTTGCTTCCCCCGGTCGGCGCGACGATGGGCGGACTGGG
CGGACGATCCCAACCTGGATGACATGGATGCCTCTTCGGATGGTGACGGCCGGCTGGAGC
TGCCTGTGTCTCTGGCGCCGCCGCTGCTCGGCTCGTTCCTGGCTGCGGCGCGCCATGCCC
GCCGGCGGCCGGGGAAGGAGG
