morexGenes - Barley RNA-seq Database

Contig contig_38355

Source Contig contig_38355

Contig Data

|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|

morexGenes

Links

Map Locations of contig_38355 (1342 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
	No map location	No map location

Predicted Genes from contig_38355

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_53424	1	1012 bp	AK251195.1	Available	Available	None

CDS Structure of MLOC_53424

Contig Sequence (1342 bp)

>contig_38355 1342 assembly3_WGSMorex_rbca.fasta
TTAGTTAGTATGGGTAACAAGTTAGTGTAATAATAGAATGAAAATTTTGGACAGTATGAA
TAAGTTGGTTAGTTTGGGTATTTCGGGTTTTCCACACTAGAACCCGAACCCTAACCCGAA
AATCGAATAGTCAAGAAATGAGAACTGAAGCCTTACCCGATACCCGAATTACCCGANNNN
NNNGGTAATTCGGTTCGGTTCGGGTTCGGCTACCCAAACGCCCAGGGTGACCTATCAGTA
AGAATCACACCATGATTCTTAAAATAAATAAAAAAGAGTAAGAACCAGGCCATGAGACAA
CACACAGTCACTACAAACCCAATAAATGAAATGGGCCTTTTGACTTAGCAGAGCTGTTAA
AAGGCCGAAATGGGCAAAGGCCGTCAGGTCCGTGCCCAAAACTGAGCAAAACCTCAAAGC
GAAGACGAGAGAAGGTCGCTACCTAGGGCAATGGCGGCGCCGCCGGACAGCAAGTCTGAT
AAATCCCCAGAGGAGCTCCTGTGCGCGGCGGCGGAGGCCGGTAACGACGATGCTATCGCC
GAGCTTATTTCCTCTGGCGCCGACGCCACCTACTTTGACGCCTCCGGCATGACACCACTC
ATGCGCGCGGCCACCGGTGGCCACGTCGCTGCCGCGCGACTCCTGCTCGATGCCGGCGCG
CCCTGGAACGCGCTCTCTCCCGAAGGTCTCTCTGCGGGTGACCTTACCTCCGACCCCGCC
ACATACGACCTGCTCCTCGACCACGCCCTGCGCTCCGAGCTCATCCTCGGCACCGTCGCC
CGCCGGCAGGCGGCCCCCGCGAACTCCTCCGACGGCGCTCCCGCCGAGACCTACCTCGAC
TCGAGGGTTTCGTTCAGCGAGGACCGGGTGATGGATGCGGAAAGCAAGGCGGTGATGATG
GAGTGGGAGCGTCCACTCATGGAGGCGCACGCGCGGGCGGTGTGCGCCAGCGGCGGCGGC
AAGGTCCTCAACGTGGGGTTCGGGATGGGGCTCGTGGACCAGGCGATACAGAGGTACGAG
CCCGAGGAGCACACCATCGTCGAGGCCCACCCGGAGGTGTACGCCCGGATGCTCAAGCTC
GGGTGGGGTGAGAAGAAGAACGTCAGGATCCTCTTCGGGCGATGGCAGGACGTGATCCCG
CAGCTCGGCTCGTATGATGGTATGACAAAATCATTCACCCTTCTAAAGCTTGTTGCTGCC
ATTTTGAGCTTTGAAACATCATGTTGCTTGCTTGTTTGGGGATAGATGTCAATCTGCATA
TTGTTGGTGTGCTGGATCATGCCATCCGCACTTGCTCATAATCTTTTTCTTTTTGTGAAT
AAAAGGGGTCCCCCCCCCCCCC