Contig Data
morexGenes
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Map Locations of contig_38236 (5136 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_38236

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_53307 1 1385 bp MLOC_53307.1 Available Available LOC_Os04g47770.1, FRAME:+3, EVALUE:4e-156, 13104.m04847 protein cis-zeatin O-glucosyltransferase, putative, expressed
MLOC_53308 1 377 bp MLOC_53308.1 Available Available None





CDS Structure of MLOC_53307






CDS Structure of MLOC_53308






Contig Sequence (5136 bp)

>contig_38236 5136 assembly3_WGSMorex_rbca.fasta
TTCATTCAATACAATTATAAAATGGATAATAAACGATTATCTTTTAACAGGAAATATAAT
AATAACTATTTATCGTTACCTCTAGGGCATATTTCCAACAGTGCATTGTGGCTAGCTTAG
GCTAGCGGCAGTTGCTCGGTCGCGTGCCACGGGGGGCTGGGCACTGTAGGTGGCCGGGCC
AGATCTGGCCTGTGCCAGGTTGTGGCCATAGTGCGTGGCGCAAGATGGTTTCACGCGCCA
TGGAACCATGGTTGCGTTGCACGCCTGGTTCGTCTGCCTTTGCCGTGTGGTGGCCTGTAG
CGGTGGTGTCGGGGATTGGTGGTGGTGCTTCTCCTTAATGTGCGTCCACGTCCGGCTCCT
GGAGCTGTGGCGCCGTCCAGTTTGTCGGGTGCGGCAGTAAGCTCGAACAGACCAGTTCCA
TCACGAGTGGTCATGTGCTTGTGCGTGGCGACGCAAGCTACGGAGTTTGGCTGGATCCAG
CTCAGTTCCTACGCGCGGTAGTGCAAACCGGCTATGCCTGGCTCTCATTCGACCTTTCGT
GTGCGCTGTGGTGCGAAGGATCGCCCAGTTCTACGCCCAGAGTAGAAGAGAGCCAGATCC
GGCTTGGCTCGCCCATGTCCTGCGAGCGGCGGTGAAGACTAGTCAGGTTGGCGCATGCTC
GCCGAGTTTTTTGTGAGCGGCTTTGATAATGTGTGCTTGGGCTTATGCTGCTACTTGTCG
TTGGTGGCCTCGGATCCCTGGATTGCTTGTGGAAGGCCCGACTCTCGATGATAATCATGC
ATCGACTTGGTCGTTGTCAGCGAAAACAGCACCCACTGGTGTCATCTTCCTCCTTGGAGG
TATCGTTGTGAAGTCGTTCGCCCTTCCTATCAATTAGCGTGAGATCTTCGGGTGAAAACC
TCAAATCAGGCAGTGCCAGATCGAGTGACGACAGTGTCTTCAACACCGTTTTTCTCCATG
AAGGCGTCGCCTTGGGGATCCCGACGATGGGTTCTGATGATGTTCTCGTTTGAGGGTAGA
GTGTGGGTTTGTGGTGCTGTCGACGGTTTTTTTTTCTTTCTTTTTTTTCTTCTTTTGCGA
TGTCTTTTATGGTGCTTTTCTTTTCCAAGGACTTCTGTAACACGTTCTTGTGATCAATGA
ATTTGACAATTCTACTGCCGACAAAAAAAGACAGACGATTCATCATTTTCTGCTCACTAA
ACAACAACTATCGTCCTAATCCAAAAGTACAAACAAAACTTAAACTTCACTCGTCATCAG
GCAACCAGACGCCAGTGTTGACCGTTCCTCTCAAGAAATGCTTTGAATAACAAGGAAGAT
AGATCTGAGCCTACGTCATGCAGCATCTTCTCCCCGCTCTGTTCAGTGTTTACTCTAGTG
AACAGAACACAAGCGTGGGCGCTACGGATTTGCTCCCTGACAGGACTGACGGAAGGGAAG
CTTCCGCCATGGCACGCCCCTCATAAATATGCACCATCGGTAGCCCCTCCGCTTCTCAGC
ACCACAAACACACACATCGGTAGGGAAGCTCACCACAAACACATCCAATGGAGTCGTCGG
TGGCGGTGGTGGCGGTGCCGTTCCCGATGCAGGGCCACCTGAACCAGCTGCTGCACCTGT
CGCTGCAGCTCGCGTCGGAGCCGCGCGGCCTGGACCTGGACCTGCACTACGCGGCGCCCG
CGGCGCACGTCCGCCAGGCCCGCGCGCGCGTGCACGGCTGGGACGCGCAGGCGCTCCGCT
CCGTCCACTTCCACGAGCTCGACATCCCCGCGTTCGCCGCCCCGCCGCCCGACCCGGACG
CCGCCTCGCCGTTCCCGGCCCACATCATGCCCATGTTCGAGGCCTACGTCGCCGGCGCGG
CCGCCCCGCTCGCCGCGCTCCTCCGGGAGCTCTCCGCGTCCCGCCGCCGCGTGGTCGTCG
TGCACGACGTCATGAACGCCTTCGCCGCCGTCGAGGCGGAGCGCCTGCCCAACGGGGAGT
CCTTCGGGCTCTACTGCGGCGCCGTGTCGTACATGGTCGGCATGCTGGACGCCGGGCACC
GCCTCCTGCGGGAGAGCGGCCTCGAGTACGCCCCCATGGACAGGTACGTGTCCAGGGAGT
TCATGGAGTGCGCCAAGAGGCAGTCGAGCATGGCGCAGTCGGTCTCGCGCGGTGGCGGCA
TGATCGGCAATACGTGCCGCGCGCTAGAGGGCGAGTTCGTCGACGCCTTCGCCGAGACCT
TCGCCGCCGTCGGCCAGAGGATCTTTGCCGTCGGGCCGTTGAGCCCCCTGCTTGAGCCGG
GCCAGATCGACGCGAAGCAGGGGCGGCACGAGTGCCTGGACTGGCTCGACAAGCAGCCGG
CGGCGTCGGTGCTCTACGTGTCGTTCGGCTCGACGTCCTCGCTCCGAGGGGGGCAGGTGG
CTGAGCTTGCCGCGGCGCTGAAGGGCAGCAAGCAGCGGTTCATCTGGGTGTTGCGGGACG
CCGACCGCGGCAGCGTATCCACGGACGACGCCGATGGCCGCCGGCACGCGAGGCTGGCGT
CCGAGTTCGCCGAGCAGACCCGGGGCACGGGGCTGGTGATCACCGGGTGGGCACCGCAGC
TGGAGATCCTGGCGCACCCGGCCACGGCGGCTTTCATGAGCCACTGCGGCTGGAACTCGA
CCGTGGAGAGCATGAGCCACGGGAAGCCGATCCTCGCGTGGCCCATGCACTCCGACCAGC
CGTGGGACGCGCAGTTCGTCGAGAAATACCTCGGGGCCGGCCTCCTGGTGAGGCCGTGGG
AGAAGCACGGCGAGGTGACGCCGGCGGCGACCATACAGCAGGCGATCGAGACGGCGATGG
TCGGCGAGGAAGGGCTCGCGATGAGGCGGCGCGCCAAGGCGCTCGGGGAGGCCGTTCGCG
CCTGCGCGGCAGCAGACGGCTCGTCGCGCAAGGATTTGCAGGATTTCGTTGCTCACCTGA
CTAGGTGATGGTATATCGTGTGCCTTTTTCTCTTTGTGATAGGGAAGCACTTTGGATCAG
AAGACTGATTTGTTCAATCCATCAGACTGGTCGCGAGCCCTTGATTCAATACCCATCCAA
CGGTTGAGATGTTTCTTCCATCCGCAAATCCAGCCCACAGCTGCACCACACCTTTATTTT
AAAAACTAATTGATCCCCAAATCAATCGAGGCGAAGGTCTCGTGCATGGCTCCTTGCGGC
CCCGTACAATGCGCTGCTCTCCGTCCTCCGCGGCTGCATGTGCACTAGCGTCACCAATGT
CACCACCCCCATCGCCTTCCGCTTCACCGCGACTCCACGACCTGCACCCTCGAGTCCAAC
CACTAAAGCACAGGCTAGAAGAAATCCTAGTCTGCATGCGGTTGTGCAGGAGATCGCATT
TGCGTCTGCTCATCTCGGCAGCCATGAGCCGACGACTTGTTTCTTCATCTCGACAACAAA
CGACAACAAACACACACAACTCCATCAGACATGGCTGATAAGTCACTAGTAGAAAACAGG
GATTTCGTCCTAACCGGACCGGAGCAATAGGCCCGATCGCGTTACGAACCGGGATTAATG
TGAGTATTAGTCCCGGTCCCCTAGTCGGATGAACCTCGGTAGGTATTAGTCCCGTTCCGA
ATGAGACCTTTAATCCCGGTTGAAGACATCAACCGGGACTAAAGGTCTAAAGGGTTTACC
ACCTTTAGTACCAGTTGGTGTGTGTAACCGGGACTAAAGTTCCTCGTTGGAGCCACCAAC
CGGAACTAAAGGTCTTTTTTTTACGGCCCAAATTTCACGCGGGAAGGGACCTCTCCAACC
GGGACTAAATGTCTATTTTTTTTGGCTTGTTTTGTTTTTCTAAACAGGACAATTTCTGTT
TTTTAGATTTGAAATAACTATTAAAATACTTATGTTTTTGAATGAATCTTTTTGCTTTAG
GTCACAAAATTATAAACTTTCTGTGAGTGCCAGTAGTTTTCAAATTTGAATTCTTTAAAA
TTTGTGTGAATCACTACTTTGTGAATAACTTTACTTTAGAAATAGATTTTTGAGTGATTC
TTTTTCCTGTTCTTTAATATTAGTATGTGTTATCATTATATTAAATTTGATAAGTTTTAG
GTTATTTTAAATGAGTGTTTTAATCAAAAGTAGATTTTGTTTAGCTCTTTTAGTTTTATA
GCTCAAAAAACCATTAAACACATGAAAATAACAAACGAAGTTACAAAAGGTTGAAAATAT
TAGAGTTACTAAATAATAATTATTTTTTAGAATAACAGTTTCAAACTCAAATGGTGAAAC
GTGTGACATCATGCTCAAGGGCTTGATAGGATTGATATGATACATGTAACATAAATTAAT
TGAATAAGTAGTTTATTTTTTAAAATGTTTTTAATTATTTTAGATTTTTGAAATTCGAAA
AGAATAAAAATTCAGATTGTAGAAATTATTATTTAAAAGAAAATATTATGTCATATTTGT
AGTCCTCACATTTTTCTGATAATAATGGATATATTATTTGTTGAATTTCGATTTATAGAT
CCATATTAAATGAATAAATGGCAAACAATGAATAAAGTAATATTATTACTTGTTTTATTT
TCATTAAATTTCAATATTATTACTTATTTTATTTTTGAACTTTTATTTATTTTCGATTTT
TTAAAGCTTTTTGAGAATTATTTCGAGTTTTTTTTTGAAAGTATTGCCTTTTTGAAATGT
TTTTGAGTTTTTAAATTAATTATTGTTGTTTGTTAATCATTGTTTGTTATTTTAGTAATT
GTTTGGCATTTAAAAAATGAAATCATGTGACATCAAGACGTAAGGTTTAATAGGATTGAT
AGCTTACTATTGTCAAGAAAACAACAAGTGCACACTAGAAAAGTAGTGCAGATACATCTC
GAAAGTTAAGCGTGCTTGGGATGGAGCAGTCAGAGGATGTGTGACCGACCAAGAAGTTAG
ACGATTTGAAATAAGTGGAGTGGTTGACTGACCGGAAAATTAGACGATTTGAAATGAGAT
CTCCAAGCTGAAGTAGTGGGTAGGGGTGATTAGATATTAAATTATCAGATAATTCAGATA
TTTGAAAATCGGAAAAAATTCAAAAAATTTGATTTAAAAAAATTGAAATTTTTTCTTTAG
TCCCGGTTGGTAACACCTCATTAAAGCGAATGTTCC