Map Locations of contig_38200 (3952 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_38200

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_53279 2 1073 bp AK374036 Available Available None





CDS Structure of MLOC_53279






Contig Sequence (3952 bp)

>contig_38200 3952 assembly3_WGSMorex_rbca.fasta
GGTTGGGTTTGAGGGTTCTAGTCTTTGCCCCCTGTTTTTCAACCCTTAAAAGTGTCAAAA
ATGGCCAATTCTCAACCCTTAAAAATGATTTTAAATTTAAGGGTTTGAGAGCTCTACTAA
ACATGCTCTAAAGAGTTGAGAACTTACTGGGCGTGAGCAGGCTAGCCCTAAATACAAGAA
AAACGTCCACGCTGGCCCAACTGGAGTTGTTTACAACTCGTATTCCTATTTTTCAGCGGT
TTTGACCAATATACAGTTTGGGGGGCCGGCCATAGTTCAGTAAATTGTCAACGCTGAGCC
CGGGCACGTCCCCAGGATGCCCGGATAGTAAAATCGCCCTTGACACCCCCTAGTCGATGG
ATTTGAACTGGTTCAAGTCGGATCCCTTGGAGACCATAATGGAGAACGCTAGAGATCGTC
AGAGGTGAGGTGGCTGGTAGATGGGAGTGTATTGGGGTGGAATAAAGTGGCTAGGGTTTG
GTCCGACCAATGGATGAGGACGAATATATGTGGGGTCAATGCGGGTCAGTGCGGGTCAAG
CGGGCGCGCCCCGGCTCGCCTATATCCGCCTCATATTTGGGCTGAAAATGGAAGGTGCCG
ATCAGCCCGGGAGTTTGAGGCCAGTTTGATAGGCCCGTGTGAGTCACATTTTCGTGATTC
GGGGTAGGGATGCATGAAAGCTTCATATCCATGTGCCAGAACCATGAGTTGATCGCGAGA
TTTTATGGGTTTCACCTCTAGCCTACCCTAATTTGTTTAGGACTAAAGACTTTGTTGTTG
TTGTTGTTGTTGTTGTTTTTGTTAATCGTTTATTTTAAAATTTTAAACATGTGTAGACAA
ATGCTTCTGATGTATACATAAAATCTATAAATGTGCATGAAAATGCAGACATGTGTTCAA
GTAAAAAATCAGAAGAAAAGTAGTGAAAGTCGAAGAAAGGGAAGAATCAAATATCTAAAA
AACTGCACAAAGGAAAAACCCAAAGAAAACCATGAAACCCCATTAGAAAACGGAGAAAAA
CAAAATAAAAACAAAGATAACTGATGAAAATTAAGGAAGAAACATAAAAACCCGACGAAA
ATAGACAAGAAAGAAGGAACAACTCCATAGCAATCTGCTTATCTCCGTCCTTGCAAATGT
TAAGAGCGAGGAGGAAGCTCTTGAAGTCAATCTCGCTACGAAGGAACAACTCAGCGACGT
GACACTATACTTTTCTCGTCATGATAAAGGGAGCAGTCGAGAAATTGAAGCAGGGGTACT
TGAGGGCCTCCCCGTGGTACTTGAAACACTAAAACTTGATTTGTACAAAGGTTCGAGGTA
TCCGAATTGTATGGGATGGTTGGTAAGTAGAATGGTGACCCAAAGGACATGCAAATCCTT
ATACTGGACTAATGCACACCCATGCATCGTTTGTTTACGACATTCACAGTTGAAAACGGT
AATTAATTTACGTCGATATTACGATTCCTAATAATAAAGTAAAATTATGACAAAAATTAA
TAAAACTGCAAAGCCCATTCTTCTCCTGTTGGCAAAAAGGTTATGGCAATATTTGGCAGT
AACTGATTTCATTCTTGGAAAAAGGCAACCATTTAATTTACGAATGAAATAGGAAAGAGA
AAAAAAAACAGAGCGAAAGAAAAGAAAAACAGCAGCAGTGGGGAATGCGGCGGACCCGAC
CCGAGCCCACGGATCGATCGCACTCGGAAGGAATGCCGGCGCCGGCGCAGCCCCCGTCCG
TCGCCGGCGGCGGCGCGGCGTGGCGCCACCTGCTGCTCCTCCTCACGGCGCTCCCGCTCG
CGCTCGCCCTCCTCGCGTTCGCCCTCCAGTGGCGCGGCGCCGGCGTCGACGACTCCTGCT
CGCGCTGGCCCCCGCGCCTGGCCGTGCCGGCGCCGTCGAGGCTGCAGTCCCTCCGCTCCG
CCTCCTGCGTCGAGGTGCTCGCCGCCTCCTCCGCCCCCACCTTCCCCTACCTCCGCGGCT
GGTCCTTCCACTTCGACGCGCCCGACACCCACCACCCAAAGGTACCGCCTTTCCTCACCC
CTCCCGTCTCGCCGCCGGCCGCGCTCACCCTCTTCCTCGCCGGCCACCGGCGTGTCTGAC
CTGCTCATCTTTCGTCCTCCTGCCTGCCAGGTGTGCGTGCAGACGAGCACCTCCGCCGGC
CTGGACCAGATCCTGCCGTGGCTCTACTACCACAAGGTCGTCGGCGTCGCGCACTTCCTC
CTCTTCGTCGAGGGCAAGGCCGCCAAGCCCACCGTCGCCGGCATCCTCGAGTCCATCCCC
GTGCGTTCCTCGCCTCATCAGATTTCCAATCTGACTCTGCTTGTCTGTTCTGAGTCTCTG
ACTCTGTTTCTCTTTCAGGGTATGAAGATGGTGTACAGGACCAAGGAACTTGAGGAGCAG
CAGGCCAGGAGGTCCGAAACAATTTTTGCCGAGTTCCTCAATTAATTTTCGATATCCGCT
CTGATGATGTATATGTTTCACCCGACCTGCAGCCGAATCTGGAACGAAACCTGGCTCGCG
GGATTCTTCTACAAGCCTTGCAACTACGAACTGTTCGTCAAGCAGTCACTCAACATGGAG
ATGGCGATTGTAATGGCCAGGGTATGTATGTTTGTTTTCGGCCTATCACCAGCAACTATT
ACCAGTAGTATATTCAGTTAGTGTATTGTATTTATAATAAACAAAAAAAATTATTTCTTC
ATGGTAGGAAACTGGCATGGATTGGATAATGCATCTAGACACCGATGAGTTGCTATATCC
AGGTGGAGCTCCCGAGTATTCCATCAGACGTCTGTTAGCCGACGTCGCCGATAATGTTGA
CATGGTTATCTTTCCTATGTAAGTATGCTGTTGCTGCTCCTAATACACCTGCCAGACTTC
TTATGTATAGTAATTAACTTGCTTGTCTGCACTCTGCAGGAAAGCAGTGTCGAGCATGAT
GATATAGAAGATTCATTCAGCGAGGTAAACCTCCTCTGTTTTTAAGAACGGGATTTTTCT
CAAGTTCCGTTGGATATAACGCCGGCTGATGGAAACAACTTATGTTTAAATACTCTGATA
TGGTTTCTATTGTTCGGTTACATCTAGAGTCTGATACTTTGGTATGATTTATGTGTGTCT
AATGCACTGATATGGTTGTTTACATTTGCTTGAAAATTTAGTTTCAGGTTCACTATAATC
TGGTGGCTTGTCAGATTTCCATTTAGCCTAGCATACTCGAACTAAGTTTTTCATGCTTTT
TTAGTGTAAACTAGACATGGATCTATAGTTAATTTAGCAAATTACTTGAAGAGAAAATAG
GAAAGCAAATGAAATAATCTTGAACTCCCACATGTGCGACAAGTCAGTGAGTACAAACAC
TGAAGCACCAGTCAACCTGACAACAGATTAAGCAACTCGGCTGAGTTTTGACATTTTTTT
ATCTTTGTTAAATTAAGTGAAGAGCACCGTAGCTTAAGCTGGCTGTAGCATTTTTGTATG
AACTCTAATATATCTTGCCATCTTTAGTATGATTTTTTTTCCTTCTCATATACAACTAGT
GACCAATCATGGTTGTTATGTGGATACTTCACCAATTACCATGAGTTCCTTGTGTGTTCC
AAACACCTAGTCTCATCATTAGCTAATTTTTGTACATTTGTAAAATCTTATCAGGTGTCT
ATGTTCAAGAAGAATTATGATCATCTCCCCAAAGATACTTACTTTGGCATGTATAAGGAA
GCAACAAGAGGCAATCCTAACTATTTCATTACTTATGGTAATGGAAAATCTGCTGCGTGA
ATTCAAGATCATCTTCGGCCAAATGGTGCACACAGATGGCATAACTACGCAAAGAGCCCA
AAGTAAGGACCTTTGCCCATAGCATCCATTTTTTTCGGAACACCGTGCGAGTCTCTGAGT
GGAGCTGATTCTTATAATATTGTTGGAACGTAACTGACAGTGAGATCAAGCT