Contig Data
morexGenes
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Map Locations of contig_38160 (3396 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location No map location




Predicted Genes from contig_38160

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_53225 1 353 bp MLOC_53225.1 Available Available None
MLOC_53224 1 457 bp MLOC_53224.1 Available Available LOC_Os09g21470.1, FRAME:+1, EVALUE:1e-28, 13109.m02055 protein expressed protein





CDS Structure of MLOC_53225






CDS Structure of MLOC_53224






Contig Sequence (3396 bp)

>contig_38160 3396 assembly3_WGSMorex_rbca.fasta
CCCCTCTCTCCCCCCTGCGCCCCCGCCATGGCTCAGCACGGCTTCCTCTCCTCCCTCCGC
TCCCACCTCCGATCCCCGCCGCCGCCGACCCACATCCAGCCCCGCCGCGGGTACCACGTC
GAGCTCGGCGCACGCGAAAAAGCGGTCAGCCCTCTCCTCCCCCCTACAGTTCTCTTTTCG
CTCCGTCGATTCGATCGCTAGATCGTATGCGGTTACCCTTCCACGCCGCGGTTCCTCTGT
CCGGAGGCGCAGATCGCGCCTGTCGTTCTGATCCGCGCGCAACCACGAAACGCATGGATT
CGATCTGATTTGGTACTGGCGAGATGTTGTGATTACCGGTTAGGGAATTTTTCTTGCTAT
GCGTTATGGGTGATAGTATTCAGCTTCATTCAGAGTGATTGGCGTAAAGGTCAGGTGCGG
TGTGGGGACTGGATTTTTCTAGTTAGGTTTACGAACTGCAGTGGTCGTACTTAATGATGG
TGCTTATCATGATCCTGATAAGAGATCTGTAACTGACGTTTATGCATACTAGCTGCACAC
TGTGTGCTGTAATGCACAGGCAAGATATACAAATATGTGCCTTATGTCTAGTTGAATGAT
GCAGTAGTCATCTTGTCCTGCATATCCTTGTTCGCACAGAGGGGCATCATATATCCTCAG
AATAGATCAGCGTAACGCCGTTGTTTGCTGATCTTCAGTGTTTTGTATCGCTGCCATGGT
GTTTTGTTACCGTAGTTTAGTGTTTCTGACATTTTTGGTACTAGAGGTTTCATATAAGCA
TCTTATTTCTTTGTTGCAAACTGCCCTTTAGGTAAAGGCTAGTTGTACAAGCAAGACTCC
ATGCAGTTACTGTTATTAGATTCTATACTACTCCATCTGTCCCAAAATAAGTGTCGTTGG
TCTAGTACAAAATTTGTACTAATTTAGTGTTAAGTTTGCGACACTTATTTTGGGACGGAG
GGAGTACAAGTCAACAGCAACTTGCGAAGTGGTGTTTAGTTTATTACTTTTACTTTGTGC
TAGTTTCTTGTTAGCATGGTTTTGACTCTTCATCACTTGCAGCTTTTAGAGGAAGATGTT
GCTTTGAAGAGGTTCAAATCATACAAGAACAGTGTGAAACGGGTCTCGAAAATCGGGAAT
GTTCTCACTCTCGTTGTCTTTGCTGGTATGTTATCATACTTTTGGATCTTTAAGACCACT
TCTTATTCTTGTGTATTAGGCTTCTCTCTTTAAGGATTGTACTGTGCAATAATTAATGAT
CCAGTTTGTAATTGGATGTTGACCACCTGTGTAATGTTATATGCCTGTTATCATGTTAGT
TCTGTCCTCATTTTATGATATAGGCATTTAGTTGACGTGGGTAGTATCTCTCTACTTTCT
AAACTAAATTTGTAGTTGGGTTCGATAATGTAGGGCAAATGGTAGTATGCTTCATTGGTT
AGTTTTGTAGCACCACAGATATAGTCTGTGCTGTTGCACATGTAGCTATTTTTTCTAGTG
TAGTAAAGTCGGCAACTCCATATGGTAGCTATTTTTTCTATATGAATTCTGGCAACCCAT
CCCTCTGTTATTCATTACACTCTAGCTTATTTTCTGGCTGCAGTACTTCTACTGACCATG
GAATGTATTGTACTCGTATATCATTATTTTCTTGAGTGCTGAGAAAATAACTAATAACTT
GAAGTCTATTTGTTTGGGTTTGATGATGTATTCTTGTAACTAACAATTGCTATGGAACTT
TGAATATGTATTCTTGTAAAATGGATGTATCCAAATACCAAAACGTGACTAGATACATTC
ATACCTAGACAAATCTAAGACAAGNNNNTTGGGACGGAGGGAGTATATCATTATTTTCTT
GAGTGCTGAGTTGCCATTTGAAAATAACTCATAACTTGAAGTCTATTTGTTTCGGTTTGA
CAATGTATTCTTGTAACTAACAATTGCTATGGAACTTTGAAGATGATGTGCTTTTTTTAA
GACACATTTTCCTTGTATCTCTGGTTCTATGTATTGCTGTTAGCCGCCCTGGCATGGCCG
TAGTAACTGACCATGTGAAAAGGAAAGTTACTTATTCATCTCACCAATTTTCAGGGCATG
CTTTGTCTTGAAGTGTGCAGTAGGTCTGAATACAGTTGTCTTTTTCATACCGGCAGACTG
CACATAATCCTTGAAGTTTAGAAACATGTTCTTCATTACGGTAGGCAGTAGGTTTGAAAC
TGAATCTCTCAACCTCTGAAGAGAAATCTTGTGTAGCACACAATGCTATCCCCCCTTAAA
CATGTATAAGACAACCTAAAATGTCTTATATATGTTTACAGAGGCATGTAGTACTTAGTT
GACCTTTTCCGGCATCGAACAAATATTGAAATATGTGCTTTATTTCATCGGCCTTGTAGA
TTGTGGTGGCACCTGTTGTTGCATCTGATTATGGGTGATCTACTTGACAGTTACACTGAC
TGCTGTTTGTTTTGTTTTGTTCCGCAGCCTGCAGCTATGAGATCGTTGCACTGGCAACAA
GCACCCAATGAAGGAAAGCGCAGTCGGTGTGAGCCCCTTAGATCTGCCAGAAAGTGATTC
ATCTCATAAACTGGCATTTTACCAGCACTCTTTTGAGCCTCCTGTCGATCTTATGTCATG
TAAAATAAAGCAAACTAGGTTGACCTTATTTGGGAGTCGCTTTCTATTTTCAATGCCTAC
TTGTTGCACAAATGGAAGGTTTCATTTCTTCGAGGAGTTTCAATAAATTGTCGACCTCGG
ATCTTTGATGGTGCCCCTTGATGTCTGCTGTTTTATGTCATCTGGGGTCTGTCCGTTTGT
GCGTCTGAGCAGCAGCGATGAGAGTAAATTGCTCTACATGCTATAATTAGATTCACTGTG
TGATATATCTAGAGTGCGATATTTGAACTGGATGGTAAATTGCGAGTTTTGTGGGGAAGG
GTAACCAAAATTTCTGCTTGGATCAGCACATAATAACTTGAACTCAAGCTGCTTGAACAC
AAGCATCAGGCAATTAAATTTGTTATATACGTGAAAGGTTAGCGTTAAGCGTGTTACTCC
ATCCCCTCCCAAATCCTAGCCTTCCCTCCTCGAATCGGGCGGCTGCGCGGCGCCCCCAGC
CGAAAATCCCACACAAGTAAAGGCTCTGCCCAGTCGGAAATTTGGAAACCAAGTCCGTCT
GGAACCGATAAGGAGAGAGGAGGAGGAGACGACCGTAAAACCCCGGAGGCGAGCGGCGAT
GGCGACGAGGGTGTGGGCGGCGTCGGCGGCCTTGAACCCCATTATCCTCCCCATCTCATC
TTCCCCACGTCCGAGCAAGCCCGCCCCCTCCACGCGGCCGAGCGGGCACCTCCGCCTGCG
CACCCGCCCGCCGGCGCCGGCCGGCGCACGCGGCGG