Contig Data
morexGenes
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Map Locations of contig_38092 (2743 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map location




Predicted Genes from contig_38092

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_53147 2 2003 bp MLOC_53147.2 Available Available LOC_Os07g10240.1, FRAME:-2, EVALUE:2e-154, 13107.m01036 protein anthocyanidin 3-O-glucosyltransferase, putative





CDS Structure of MLOC_53147






Contig Sequence (2743 bp)

>contig_38092 2743 assembly3_WGSMorex_rbca.fasta
GCCATGCTAGTTATTATTTTGTGGATTAATCTATTCGGAAAATTGCCTATTTGCTCAACA
TTGTATGCGCGCACGCGGCGAGCTTCAACTTCTAAAAAATGTTGAGCCACTTCCGCTCAC
CCTCACACGTGATCTCGATAGCCGGAGTTGATGGTGGGGTGTGGTGGCATCCTCGATGCA
GCAGGGCTCGACGATGACGATGGGTGTATCCCCACGGACCGGATTTGGACATTGACGACT
ATTGCGGGTGGACGGCGGGGATGCGGCACGAGTGAGATGGAAATCGACTGGGATCACGTT
GCTGGGTGGATGTTGTGGCACACAATGTCGTGGGGCGGGGTGGTGGTGGCAGCCAGATTC
AACGACGACGCCAACAAGCGGAGGAATCGGCTGCAAGAGGTGAGTATTCAACGGGCAGTT
AAGATTATGCACCATTGAGTTTTACGGAAGGGTCTGTCTAAGATATATCTAGAGGTATTG
CACATCTGAATCACTTAATCAACATAAAAAGTAAAAGAAGAAATAACCATACAGATCTTT
AAAATCAATACATATAATTTATATGTGCAATATCTAAATCACATCATGTTATGCCTTAGC
AAACCCGTTTACAGCAGTAGCAGCGTTGATGCAAATATGCTGCGCGAGTGGCTAATATTT
TGGGCTGTCCAGAAAAATCGATTTTGGCAATGTAGCGGTTTTTACATCATCTGTTGAAGA
TACTTTTAATATTCCAAATATTCATGTGTTTATTTAAAAATGATGTCTGAAAAATTGCAA
CTCCATATTGGTTGCAAATATGTGAAGAACACGAGTGCGAGTACATTGATTCCATGACTG
CTTATTTTGACTTAGAGGCTGAACAGGGCTGCGCCCTATGCCAGTCGCCGCAGGTGCTCC
ACGAGCTCGTCGACGTACTCCTCCTGCTTGGCCCTGTCGCACAGCATCTCCTGGAACTCC
CTGGCGTTGCGCGCGAGCGCCTTCCCTTCCTCGTCCTCCCGCGCCATCACCCGCCGCACC
GTGCTGGCGAGGTCGGCCCGGCCGAACGAGCCGTCGCGCTCGTCCCTGGCCACCTCCAGC
CCGACCGCCCTCGCCGCCATGACCCGCGCCGTGAGGCCCTGGTCGGCGAACAGCGGGAGC
ATCACCAGCGGGTGCCCGAACAGGAAGCTCTCCATGAGCGAGCTCCACCCGGCGTGCGTC
AGGAACCCGCCCACCGCGCCGTGCGCCAGCACCCGCACCTGCGGCACCCATCCGGCGCGC
ACGACGCCGCGCCCGGCCACGCGCTCTGCGAACCCGTCGTCGGGGAGCGGCGGGGCGCTG
GCTTCCCGCAGCGCCCAGAGGAACCGCGCGCCCGACAGCTCCAGCCCGGCCGCCAGCTCG
CGGATGTTTTCTGCTGTCAGCGGCGCCTCGCTCCCGAACGCGACGTAGAGCACCGACCTC
GCCGGCTGCTCGTCCAGCCAGCGCATGAGGCTCGCGCTCTTCTCGTCGTCGTTCTCGCGG
CCGGCTTCTTGGGCGGCGCGCGCGGCGTCGTATGGAGCGAGGAGGCCGGACAGGGCGAGT
GGCTTGCCGAAGAGGTCGGCGATGAGGGGGCAGAGCGCTCCGTCGACCTCGCGGCAGCTG
CGCAGGATGAAGAGTGTGCATTGCCGCTCCGTCTCCCAGAAGCGGAAGGCGTCGCATAAG
CCGGAGGCTTTAGGGCGGAAAACGTAGACCATTTGTTCGGCCTCGTAGAGGCGGTGGGCG
ATGGGGGTCGGGAACGGGATCCACGGCGGCTGGGCCGTCAGGTCCTCCGCCGTCACCCGC
GGGCGCGCCTCGTTCGCCGCCTTCGTGCCGGCGAAGGCGATGAACGACGCCGGGAAGATG
GAGAAGAGCGCGCACGGTACCTGCAGGCAGCATGCCAGCATGGAGCGTTGGAGCCACGCC
ATGACCGCACCTACTGCCTATACTCGCCATGGCAGAGACGTACCTTGTGCTGCTCAGCTA
TGGGCGGGAGCCAGTGGTGCGCGAAGTCGACGAAGATCCAGTCGGGCTTCTTGCATAACC
CTATCGCGCCCTCCCCGACGCCACCGCCGGAGCAGGCCCCCGCGAGAAAGTCGGCGAAAG
GAGCGGCGAGGCCGTCGAACACCACCTTGAGGAGGTCGCCCTTCTCGGGCGGGACGTCGG
CCGTGGACTCGGCGCCGTCCGGGAGGCCGTCGACGCGCGGCAGGGGCAGGGGGAGGAGGC
GGATGCGGGGGCGGAGGTCCTCGGGGACGGGCCGCAGCCTGGCGAGGTTCCTCGGCGTGG
ACACAAAGGTGACGGCGTGCCCGCGCCGCGCCAGCTGCTCCGAGAGCTGCATGTAGGGGA
TGATGTGGCCGAACGCGAGCCACGGGAACACCACGATGTGGAGCGGCGAAGAAGACCGCG
CGGTCGCGGTGGTGGCGTCTCCGGCTTCTGCCATGGCCTCTGCTCTCGCTTCTTGGAAGC
AAGTGTGCTTCCGTTACAAGTGAGCTACATCATCGCAAGCGTGGAGTGAATCCCCATTGA
AGGGACGGAAAACAGACCCTATTTGGTATGCGTGTGACTAGTCAGCAAACGTTGGCTGGC
TAGCGCTCCAGGGCATACACCCAAATATGGCAGTGGTCCTTCCTCTTGTTGCCAGCTATC
ATACGAAAAGGGAAAGCAAGTCCTCAATGCGCACATGGCATGGTATCTTTCCTCAGCACA
CACACATGCCACCCATACTCAGAGCATCTCCAACCGCCGCGCT