| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
 |
No map location |  |
Predicted Genes from contig_37937
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_52963 |
1 |
667 bp |
MLOC_52963.1 |
Available |
Available |
LOC_Os03g46200.1, FRAME:-2, EVALUE:4e-23, 13103.m04971 protein acetyltransferase, GNAT family, putative, expressed |
| MLOC_52962 |
3 |
4087 bp |
MLOC_52962.3 |
Available |
Available |
LOC_Os03g46260.1, FRAME:+3, EVALUE:2e-121, 13103.m04976 protein DUF581 domain containing protein, expressed |
CDS Structure of MLOC_52963
CDS Structure of MLOC_52962
Contig Sequence (5313 bp)
>contig_37937 5313 assembly3_WGSMorex_rbca.fasta
AAAAAAGTTGTCAAAACATATCGACATGGGATCTAGTTTTGAAGATTTCATCGAAACAAA
GTCAATGACGAAAATAGATCATCAATCGAATTAACGGTTTAAGAGATAAAAGTTTTTGAA
TTTCAATCATTTTAAAACGAATTTGATGACATCATTGTATGGATGCATGACAAAGAAAAG
GACTTGGCCGCACTGTAGCACTGTGCTATTTCCTGAGACAAAAAAGTTACACAACCTAAT
CACGCGCCAAGAAATTAAGTGTGCTCCAAAAAAAGAAGAAAAAAATTAAACGTGAGCGAA
GAGCCGCCGCATCGGAAGGCAGTGATGCGCACACTGCGGAATAGATTTTTCCATTATTCA
ATATTAAGCATTGTTTTAAATAAATTCATTAAGCTAGATATAAAAAAGAATTCCTTTTTT
ACACATTGCAACGCACGAGAAAAAAAAGATGATCAATTATTGTTCTCCGAGCTACGGGCA
TAGGTCCCTGTCCCTGCCCGACGATTTTATTTCCTCCAAATAATAATGCCATCACCTTCT
TTTCCATGCCCCCCTTCGGCCGTGGCCGTGGGAGGATCGAGCTGCCATTTCCCCGCGACA
ATGGATCGGGAGACTCCGCGCTCCCCACCACCTGTATAAATACGCAGACCCACTACCCAC
GACCCGCAAGCCAAGCCCGACGGCTTTCCGGCGGTTTTCCCGGCGGATAACTGTTCATCC
GGGGCGGGACTTTGGCGTCTCCTCTGCTCGAGCTCGCCGTGTGATTGTTTCTCTTGTGGT
TTTCCTCCCCTGCTCCTCGCCGGCGGCGGCTACCTGCCTCGGCATTTCCTTGCCCACAAC
CGCCGTCTTCGTCTTCCGCGTTCCACCTCGCGCCCCGTCCGATTCCCTGCTTGGCTTGCT
CGGAGGGAGAGCGGGACTGTGCGTGGCTCCTGACAGAATCTGGATCGAGGCGAATGCGTT
GGAGGCGGCGGCAGCCATTGTTGGGGTAGTTCCGGTTCGACCTGTCCGTCCGTCCGTCCG
AGAACGTTGCTTTCTGGTGAGCTTTTGGCCTCTGATTATTCTTTAAAGCTACGGAACAAA
AGCTTGCGGCGGCAGTTGCCGTCTTTTTCATGGTTGGTCATGGCCTGCCTGCCGCACAGG
TATTCCGTTTCGTCCGGCCGGCCGACGCGATGCTGCGCAACAGATCGAGGAGAGCAGGCG
GCGGAGGCGGAGGCCTGATCCCTCAGCCTGAGCCCCTCGCCGCCGCCGCCGCTGCTCAGT
CTTCTTCTTCCGCGCCGGCTCCTGCGCTCGCTTCCCCGAGGCCGTACATGGCGCTCCTGC
AGGCCGGTTTCTTGGACGGCGCGGAGCAGGGGCCCTCCTCCTCCATGAGCCCCACCTCCA
TTCTCGAGACCAAGCAGTTCTGCTGCTCCGCCCTGCCGCCGTTCCTGTCCGAGAGAAGCC
TCAGGAAGGCTCAGATGGAGACAGCTACTCTGGGTCCGGAGCCGGCCAGCGTCGGCGGCC
TCGCCGACGTGCTCCGGGAGCACGGCGACGCCAAGGCCGGCGGCCGGAAGGTGGTGTTCG
GGTCGCAGCTCAGGATCCAGGTCCCCTCCGGCAGGGCCGTGGAGCTGGTGTCCTCCCCGA
TAGAGTTCGGCGTCAAGAACCGGGACGCGCAGCTGGCCGTGCTATCCCCGGCCAGGAGGT
TCTTGCCGGAGGTGGTGAGCTCGCCCTCCGCCCGGGTGTTCGCCGGCGGCGTCGCCCCGG
GGGAAATGGCCATGTCGGAGGACTACACGTGCGTCATCTCCCGCGGCCCCAACCCGAGGA
CCATGCACATCTTCGACGACTGCATAGTCGAGAGCTGCGGGGATGTGCTCATGGACAAGG
TGGACACCGCCGGCGACGCGGTGCCGGTGCCGGCCAGCGGTTTCTTGGGCTCTTGCCATG
CATGCCACAGGCAACTTGCAGGGCATGCCAATGATACCTTCCACCGGTGAGTTTTTTTTT
ACACTGGATTGATGTGGCTATTTCTGCTGATTGCTTATATATGAGTGTCTGTTCATGCTA
AATATAAGATGATCTCAAAGCTTGGAGACATGAATTTTGACAACATGCATGATCTGCTAG
ATATAAACTCACACTGCAGGTACTGAAACAACAAGATTTACATACAAAATGTGCATTCAC
ATCATGGAGCAGAATGCAATTTCTGAATATGCTGTCACAACTAGTAGTATGCATCAGATG
CAGAGTAGATAGAAGGCAGGGGAGGGATAAAATTGTGCACTGACATCAACTTCTCAGCTT
TTATTTGCTGTTATTTGACATGGTGTGCTTCATCATTGCAAGTTTTATCTATGTAATCAT
CATCAGCTCGCTGATTGTTGACACATAGCAGTATCAACAAAATATATCTGCAGTATATAT
ACTTCATCAAGATCATGGCAGTTTTATATGCCAATATATCTTCAGTAGATGGATATGTCT
GATTCTTCTTCATTATTGGAGCTTAATTAGCAGGCATTGTTTGGTGGGAACAAAATATGT
CCTTGTAAACTAAGGGAGTTGTTTTGATTCCACATCGCTTTTGCGTAGAAAACTATGCAA
AAGAAGTTGATTATCCTACTGTTGGGGCCCTGGGGAATTATGTTAACAGCTTCCTAGCTA
GGGATAAACTAATTTGGCATCCTAAACCAGGTCCAAGTCCCAAGCCTACTCCTGACCATG
ACCCGAACCAGCTATCATCGTCGTCGCAAATACAAAATATACAAGGCATGGGAGGGATAA
AATTGTGCATTGGCACAAAGTTCTCGGTTTTTATCTACTGCAATTTGGCATGGAGTGCTT
CATCATTGCGAGTTTTATCCATGTAATAATCAACTCGCTCATTGCTTATTGTTTTCGAAA
AGGAGGAATACCCCCTGCCTCTGCATCAAGCGATGCACACAGCCATTTGAACTCGCTGAT
TGTTAGTAGCAGTATAAAGATAGTAGTACATCTTCAGTATACATACTCATCAAGATTATG
GGAGTTATATACTATGCCTTGTTTGGAGCTTATTTAGTGGAGTAGGCCTTGTTTGGTGCG
AACAAAATAAAATGTTTCCTTCCGCATCGCTTTCGCATAGAAAACTATGCAAAAGAAGCT
CATTATCCTAATGTTGGGTCCCCTGGGGGATTATGTTAACAACTAATTCCTAGGTATTAA
ACTATTTCGGCATCCATCCTAATTGATGATGTTGCTAGATGCTAAACCAGGTCCATGTCC
CAACCCTACTCCTGACCATGACCCGGACCAGCTATCATCCGTCATCGCAAAATACAAAAA
ATAAAGAGAATCGCATAGTATCTAATTGCTAGCTTGACAGCCTTATGCCGAAAGATTATA
CCGAGTTGAGTTTGGTTCGATAGGAAAGGGATCTGTGCCATGGCTTTGTTCTTGCTTCCC
CTTGTTTTGCTGGACGGTCCATTGATTCAAGTGATAAACTCATCAAACCTGGATATGTGC
TCAAAAACTTTTAGCCGGCCTCACGATTTCAGATGCTATCTTCTCGATCAGAGCAGTTTT
ATTTGTGCCTGTGCGTAGCATGAACATCAATTGCCCCCAAAAGCTCTCTGCTTTTTCTTT
TAACAACTCATCAGTTGGGCATTATTGGCACATTCCCGTGATATAATTGGTCCTTTTTCT
TTCTTTCTTCTTTCTTTCTTCAGGGACGGCAAAGCATTCTGCGGCGACGAGTGCCGGTAC
CGGGAAATGCTTTTCGAAGAGGCGGTGGACAACCTGCGCTAGCTAGCTGAACGAGGGGAG
GGATGGTGTATTTCACAGGAGAGTTTCAGTGGTGGAGAAAGGCATATGGTGGCCCTGAAT
AACCGAGATGAGATTTATTTCCCATTTCTAGTTTCTTGTCGACTTTGCAAGACTGGATGA
TGATTTTTGGTCATGGAGGACGGAACGATTCTAGTCTTTTTGCCGTGGATTAAAAGACCT
TCTGCCCACTTTTGCGCAAGAGGTTGCGCTGTTGGATATTTGATGTCCTGTGGGCTACTT
GTTCATGTGGCGTGGCAGTTAACTGAAATTTGATGCTCCAAGTTAAATTTTCGCTAGATA
AGCCATTTTGGCCAGAATTTACTCTGAAGATTAAACTATTGGAATTTTGAGAAAGCAGCA
AAATGCGCCACATTTTGTGCCAATGCATTTAACAGTTGCACTCGAACTCGATCGAAACAG
AGCACCAGCGGTTATATCAATAATCAAATTTCATGGTTTTTGTAATCACCATCGAACACT
TTGCTTGCCAATTCATCAAAAGAGAAGATGGAACCGAAATCAAACTGCACCTCTTTCAGC
GATCAAGGGGACAAAAGTAGCCACCTTGAAAAAGGGGGTTTGGGTGGGGGTGCGTTGTAT
GAGGCAATCACTGGTACTAAAAATCAGCGGCCGCATAAGCATAATGAGAGCTCAACTGCT
CCTAATCATCACGCTGTTTGTGTAAAAGAAGAAGAAAAATCGGTGGGTGCGCTGATGGAC
CAACATGATTATGGATTATGACTGACATGCCATCATTCATGAGTGAGTTGTGCTTGTACT
GCTGCTGCCTGTTGGGTATCGATCATTTCTTTGTCTTTTGGTTGCTGCTACTGCATTATT
GGTGCTGGTACTGCTGCACATAAACTAATCCGAGAGGGATCGTGGGCAAGGGACTAATTA
ACCTCGCCTTTTGACCCCTGAATTATAGGTTTGCTAACCTGCAGGTAGGTCAGGTCACTG
CATCTGATTGTTGACATGCTAGCTAGCGTCCAGTGGCTTCCCATTTTTTTGTTATGTTTA
TCGAACCTAGATTATGGACTTTGAAGCATGAACCCTCATGGTTGGAGCGAAACCCACGGT
AGTATCCCCAACCAAGTCTCTCTGCTGATGGAATTCCTTGACAAACAAAGCAAGTAACAA
TGGAGCTACATATTTTCTTTTTTAAAGAAGGCTTCGTCCCGGCCTCTGGATCAATAAATG
CATGCAGCCATATATTAATTTGAAACAAATAGTACAAATAAAAGGAACAAGGAGTAAAAA
ATAAAGATACAAGGCTACGAGTTCCTTCTACAGCATTCGAGCTAGAGCTCATGGGCATGG
CCCTCTGGCGAGTCCGAGGCGGCGACGAGGCTGAACATGACCATGTCCCTGGGCGTGCCC
TTGAGGACGACGTAGCGCCGGAGCACGCCCTCCCTGACGAACCCGGCCTTCTCCAGCACG
CGCTGCGACGCCGGGTTCTCCACGTCGGCCACCGCCTCCAGCCGCAGCAGCCACGGCCCG
CCCGCCCAAGCCGACACGCCCGCACTCCCTCAC
