Map Locations of contig_37934 (9686 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_37934

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_52954 16 5581 bp MLOC_52954.4 Available Available LOC_Os08g43760.1, FRAME:+3, EVALUE:7e-84, 13108.m04742 protein carrier, putative, expressed





CDS Structure of MLOC_52954






Contig Sequence (9686 bp)

>contig_37934 9686 assembly3_WGSMorex_rbca.fasta
GACGCGGGGTTGGTGGATCCTGCGACTCGCACGCGACCGGCCGAAAGTTTGGACCGACGC
GCCGGCGCAGATCACTTCCCTTCTTCTAATGGGTCCAAATCGACCTATTCCTTAGGAATT
TCCTTCGGAAAAGAACCAGTTCATATACCGTTGAATATCTTCTTCTGCACAAAGGAAGTT
AAGGCATAGGTAGGGGCCGGCGGCAGCCTCGTCACGGGCCGGATGGGAGCACGACGACAA
CAAATCAGCAGCGCAAAGGGGAGGTTCGGCTCGTCACACCGGTGGTGGAAGGACGTGCGC
CGGAGGTGTGCCTGCATTACAGTCCAAGTCATAGGCCTAAAAAATTTGGACCCCTAAAAT
TTATGGGTCCTATCCAGGCTGTACATTCTGCACACCTATGAGCCCGGCCCTGCTCCATCT
TGTATGTGTGTTCTATAGGTTGCATGACAAGGGTTTGACGAAATGTTCGAACAAAAGTAA
GTTTTACTCCACTAAATTTAATTTAAAGAATCGGCTAGGAATGACTAAGATTTACTGCAC
CGTTTTACTCCTTTATTTTTCAAAGGATAGGTTAGAAATGCCCTTATAATTGGTCTTTGC
ATAAAAACACAACGAATCAATCAAGTTTCATATGTACGTACGAAATGCCATGCTGGGGTA
TCACTGGATTCCATATGTACGTAGGAAAGCATGCATACGTACAGCCATGCGTTGTCGTGT
CGTGGCCTCGGCATGCACGAGGAGAGCCGTCCAGCGCCTCCCCGCGCGTGCAACGACGAT
GTACACACGCAGGTACCCGGAGCGTTCCAACCGCCAGAGGTTGACTCACTGTAGCTGTAG
CTGGACACATGGGGACGCATACGTACGTCCAGCCACGCCGCCAGTAGGCGAAGCTGCCGT
GCATGCGCAGTACATGTTCCGTTTCAGCTCCATTTCTCGTCCGTACCGACCACACATTTC
CCATGGAGCATACTACATAGTTTTTTCCCGGAATCGAGTCGGCGCATACGTACAGCTGGG
GTTTGTTAAATGGAGCCGGGGATCCTGTGGGATCATCTCAGTCAGGTTCTAAACAAACTT
TTTGATTCACCCAGATACAGTGCATACTTGTCGCTGGACTGATCTCTTGTTGTTGCTGGC
CTGGTATATACGACGACGTGTGTGACGACTGACGATAGATTCAGCGAGGTTGGCTGCTAA
CCATCAGAGATCGGGAGAGATTTTGTTTGCTGTCTTCTCCTTCCTAGCACCCACCTCAGC
CTCAGGCTCAGGGAAGGAGTACGTGTCTCTCTCTCGATCCAACTGCGGCACTACTTCATT
AGCGCCGTTTCGTTTCTAGGGATGCATGAGGGGCAGGCCGGTTCCTTTTGGCTGCCTTGC
TGCTACAAATCACAGTTATTTTCAAGATATAATTCAGGTGTTTCAGATTGTACACACATC
AGGACGCCACAGACTATCTTTCATCCAGCAGCATGAGACCGAATCCCTTTCATCTGCAGG
TACTCCCGGGCATCCATACAATTCTGTGTTTCCATTTGTCACGGCTAGCGATGGCAACAA
CCTTGCATGTGTCGTCCAATGAGTTGGGCCATTCCATCACCCAACGCTAGCTAAAACGTC
GCCGTTTTAATTAGCAACATTTCGAATTTAAATATGGAGGGAGGATCTTGCCTGCTTCGG
ATTGCCTCGGCACTAGGGAAATTTCCACGCACTTGTGCTATTTTGTTTCTTCTCTTCACA
TTCATCTGAACCCAACAGACTCTCGAGCGTGCATCTTACTCTCTGCTGGCTGGCCATGAG
GGAGACTCCATCTAACTTCAGTTAGGAATAAACAGGATGCGCTCCCGTGCAATCTGCCTT
GTCTCCCAACGGCACAGAAAAACAGATAAGCAAGCAGCTTGTCTGGATGAGATTCTTGGT
GTCCAATGCTCTCTTCATCAACCCATTGCTTCAGCCTCTCCCATATAAATACAGGTACCA
CAACCCCGAGGCTTCAGCACCAACACACTGCAGCTTGACGTGCCTTGCTTACCCTTCTCT
AATATTTCCACACAACAAAGCTTCAGTCCTCAACAATGGCTTGCCATCTACGGTCGGCGA
GCACGCCCTCCAGCCCTCGCTCCAACGATACACAAGTTGAGCAGCAGCTCCAGAGCCTCA
GCGCGACTGTCTCTTCGCCCTCGGCGACCATCGATTTGATGTCCCAAGGTTTGAGGAGGC
TGGCAGACATCTACAGCTGCATCGAGAAGATGATGTGCACACCAAGCACCCAAATCAGCC
TCTGCCAGACCCTGCAAAGGGTAGCCGTTGAGGCAGAGCTCGGACGGTCACTCGTCGTGC
TCGACCTATGCAACGCCGTGCAGGAGAGCTTCATGGAATTGAAGATGACTGTCCAAGAGC
TCTTGTTGGCTCTCAAGAGAGGAGGCGACGCGTCTGCTCAAGTCAAGGCGTACATCAGGC
TAGCCAAGAAAGCACAAAAGCAGTTCAAGAAGATCAGCAAGAAGACTGCTTCCAACAAGA
ACGATTCTAGGGTGGTGATGCTAATGGCAGAAGCGAGAGAGATCACCATCTCACTGCTCG
AATCCACATCCTCAATCTTATCCAAGCAAATTGAGATGCCCAAGTGGTCTCTTGTCTCCA
AAACATCGCACAAGAGCAAAGTCGTGTGCCAAGAGGAGCAATTGCAGGCACTGGAGAGCA
GTATTGGAGATCTTGAGAGCGGAGTGGAGCTTCTGTACAGGAGATTGATCCAAAACAGAG
TTTCTCTTCTCAACGCCCTTAGTTCGTAGATACCCTGAGCTATGGTTCCCTGCGGTTGGC
ATCCACCTTTTAAAGGATTAGTCAATCATCATGGTAGCAAGTTTGGTAGTATGTACACTT
GTGAATATGTGCAGAAAGTTCGCTTAATCGAAAAGTACAGAGAAACAATTTTGGCAATTC
CATATTTTCTGAATTTTACCATTTATGCTGATTAACTGATTTTTTGTTAAACAAGTGACT
AACTGACTTGGTTTCACATAACTGGGAGAAAATATCTCTTCTTAAACATACCATCTATTT
ACAAGAAACAGAACAATAACATGGAATTTGGGGCATTCCTGTCACTTAAAATGTTGTCTA
GCTAGTTTATGATTTGACGCTAGTGATGTTACAACAAGTAATGGTTTCTCTAATGGGCTA
TGGCTCTCAGGTAATTATTTCCCAAGGGTCATATTACTCAGGTGTCTCAAGTTCTAGCAT
GCTGGAACAGGCTAGCTCGAACCCACGACCTATAACCTTGTGATTATGCATTATCATTAC
CGAGGGGGATATGTAATGATGCTGATGACTAAAAATAATCAAGCCAACACATGCAACCGA
TGATTCTGATCAAAACAAATTCACTGAAGATCCTTAATTCTTATCATGTTGTTGTACCTT
CCCTTCTGCTTCCAAATGATGCAATAAACTTCATCCCTCTACTGGTTATATTCAGAAGAA
TTGCAAGCATGCACCATTAAGTTATATGTGCAACCAGAAGCCTTAAGTGATTTTTGGTTT
TTGCGACCATAATTTTTCAAACATTCCATACATTATTATTAAGTATTACATTTCTCGTTT
ATGCTTAGCATGCATCCTAAGTAATTTTCACTCACATGATGATAATATTAAGTATTACAT
TCATTGCACAAGCAGAAGACCTCATCCTAACAAAAAGGGGCAGCCCGGTGAATGTAGCTC
CCGCTTGCGCAGGGTTCAGGGAAGGATCCGACCACTTTGGGTCTATTGTACGCAGCCTTT
TCCTGCATTTCTACAAGAGGCTGTTTTCAGGACTTGAACCTGTGACCTCATGGTCACAAG
GCAGAAGACCTCATCCTAATGTTGAAAAATTAGCGGACAACCCTATGAATTATTCCTCTC
AGCAACAGAAAACCTGCATTTTATTTCCATGGACAATACTACTTCATGATCATACATGGA
GATCCGAAATCAAACGAAGCACCCATGCAGTGTACTGTGTTATCAATAACCAAGACATGC
CAGACATATATGCTAACTCATTGATGTTTGCCAAGCTAACCAAAAGCAGGTACTCTCCTT
TGGAGGTTAGCAGATGAGATTCTTGCTGTCGGTTGCTCCGTTCATCGTGTCATTTCTGCT
GCCTGTCTGATATAAATACAGGGAGAACCCCAGGGCTTCAGCACCAACACACTGCCTACC
ATTCTCTTCCATTTCTATACAGAAGAAAACAGCACCAAAGCTTCAATCTCAAAGCATGGC
TTACCATCTACGATCGGCAAGCACGCCTTCGAGCCCTCGATCAAACAAAAGTGAAGTCGA
GCAGCAGCTCCAGAGCCTAAGCACAGCCATCTCTTCGCCCTTGGCGACCATCGATACGAT
GTGTGATGGCTTGAGGAGGCTTGGTGACATCTACAGCTGCATCGAGAAGATTATGTGCAC
ACCAAGCAGCCAAGTCAGCCTTTGTCAGGCTCTTCAAAGAGCAGCGGTGGAGGTGGAGCT
TGGACGGTCCCTCGTCGTGCTCGATCTCTGCAACGGCATGCGGGAGAGCTTCATGGAATT
GAAGATGACTGTCCAAGAGTTACTGTTGGCTCTCAGGAGAGGAGAGGTTGTGTCTTCTCA
AGTCAAGGCATATGTCAGGCTAGTAAACAAGGTGCAAAAACAGTTCAAGAAGATTAGCAA
GAAGACTGCTTCCGACAAGAACGGCTGTAGGGTGGTGGTGCTACTGGCAGAAGCGAGAGA
GATCACCATTTCGCTGCTCGAATCCACATCCTCAATCTTGTCGAAGCAAGTTGAGATGCC
CAAGTGGTCTCTTTCCTCCAAAACATTCCAGAGGAGCAAAGTTATGTGCCAAGAGGAGCA
ATTGCAGGCATTTGAGCACAGTATTGGAGATCTTGAGAGCGGAGTGGAGCTTCTCTACAG
GAGATTGATCCAGAACAGAGTTTCTCTTCTCAATATTCTTAGCTCGTAGATACCCTGAGC
TCTAGCTCCCTCTGGTTGGCATCCACCTTTTAAAGGATTAGTCAGTCATGATAACAATTT
TGCATTGTGTATACTTGTGGATATGTATAGGAAGTTCACTGAAGCGAAAAGCCGAAAAGC
AAATTAAACAATTTTGTCAATTTCATTTCCCTGATTTTTTTCATTTCTGCTAAACTTTAA
TACCATTCACATGGTTAGGTAGCTTGATACAACTATTTCAGTACAAAATGTGTCAGATAG
AAATGATATTTATCATAGTAGACCCCACCTTTATTAAGGCTTTTCAGTTTTCAGTATATG
ATTACGGGAAGAGATAACACATAAACAAATATCTGACACGACGAGCTAAAAGACCCCCAA
TGTCCAATGTTAACTTCAGTTAACACACCACCATATCTTATCCCCGCTAAAGGAACTGCA
CCTAGTTGCACCGATCTCTGAAGAAAAAAGTTGCGATAATGATGTTCCTAGAGATACCCT
GATTACTACCTTTTGTCCCTTCAGATCTTATCGATAAGGGGAATTTTATGTACCCCAAAA
GATCAAGGCAGTCTGGCCAAGGGGAATTTTGTCTATAAGGGAAATTTTGTGTACACGAAC
ATATTACTCTGCTTTTATTATTAAAAGCAGAGCAATATGTCTGTGTAGTCGAGAATCTAC
ATCCACTTACATGGATGTCCTTTTGTTGTGGGATAGCTGAAACACATCAGTGCTGCAACT
CATTATGACGTTGGAGAACCAGCAGAGAACAAGACTAAACTAATCATTGCAGCAACACGA
AGCCCCCATTGCATTTCCTTGGCTAATCTTCCATGATCACATATAACCCGAATCTAGATC
CGAGATCAAACTGAACACTCGTGCAGTGCGCTGTGTCACCAACGACCTAGACATGCCAGG
CACATATAAGCTCACTGATTCACACTTGCTGCGCTAACCAAAAACACGTAGGCAACAGCT
TTGTCTGTATGGGCTTTGGGTGGCCATGTTTCTTTCAACAGATCACCTTAACACATATGG
AGGTTAGTTGGATGAGATTCCTGCTGTCGACTGCTCTACCCATCATGCCATTGCTCCCGT
TATAAATACAGAGAGAAGCCAAGGACTGAGCACCAACAAACTGCAGCCCTTGTCTTGCCA
ACCTTTCTCTTCCATTTCCATACTGAAGAAAGTAGCATCAGAGCCTCAAAACCACAAGCA
TGGCTTACCATCTAAGATCTGCAAGCGCGCCTTCCAGCCCTCGCTCAAACAAACCCCAAG
TAGAGCAGCAGCTCCAGAGCCTGAGCGCAACCATCTCTTCGCCCTTGGTGACCATCGATA
CGACATGCGAAGGTTTGAGGAAGCTGGAAGACATCTACAGCTGCATTGAGGAGATGATGT
GCACATCCAGCAACCAAGTCAGCCTCTGCAAGACCCTGCAAAGGGCGGCAGTGGAGGCAG
AGCTTGGACGGTCCCTCGTCGTGCTCGACCTCTGCAACACCATGCAGGAGACCTTGATGG
AGCTGAAGATGACTGTCCAAGAGCTCTTGTTGGTTCTCAAGAGAGGAGAGGATGCAACTC
GCCAAGCCAAGGCATATGTCCGGCTAGCCAAGAAGGCACAAAAACAGTTCAAGAAGATCA
GCAAGAAAACTGCTTCCGACAAGAACGATTCTAGGGTGGTGATGCTAATGGCAGAGGCGA
GAGAGATCGCCATTTCACTGCTCGAATCCACATCCTCGGTCTTGTCCAAGCAAATTGAGA
TTCCCAAGTGGTCTCTTGTCCCCAAAACATCGCAGAAGAGCAAAGTTGTGTGCGAAGAGG
AGCAATTGCGGGCATTGGAGTGCAGTATCGAAGATCTTGAGAGCGGAGTGGAACTTCTGT
ACAGGAGATTGATCCAAAACAGAGTTTCTCTTCTCAATGTTCTTAGTTTGTAGATGCCCT
CATCTCTAGTTCCCTGCGGTTGGCATCCACCTTTTAAAGGATTAGTCAATCATCCTAACA
GTTTTGCAATGTGTATGCATAGAAAGTTCAAAAGCAAACAACAACAATTTTGTCAATTCC
CTATTTTCTGAATTTTATCATTAATGCAAGGCCCACAATTTAAGTCAGTATCTGGATTAA
ATGACTTGGTTTGTCCTCAAACATACTACGTACTTACAGGCAACAGAACAATAACAACTG
ATATAAATAAGTATCCTGATTAAATAATTTGGTTCAATAAAATGCTGTGTAGCCCATAAT
TTTACGCTACTGATGTTACAAGAAGTGATGGTGCCTCCCGAATCTGGAAGGTGACTTTAA
TGGTCTACGCATCTCATCGAATTATTTCCATGGGTCATATTACTCATCATTAGTCATTAT
CACTATTGTGGGAATACCTAACGATGCTGATGACTGGCAATAATCAGGCCAACACATGCA
ACCCATAATGCTGATCAAAACAAATCCACTCAAGATCCTTTCTTATCATGTTATTGTACC
TTCCCTTCTGCTTCCTAGCGGAACAATGAACTTCATTTTTCCATCATTGGATTAGTTTCA
AATTTGAAAATCAGAAGCCATTGGGTTACACATATACATTATGCATAGTACAAAATTGTT
GCTGACTTAGTACAAAATTTCACAGGATTAATATGGATCGGATGGAATAATTTTCTTGCA
CACGATTATCTCAGCTAGCCAGATGGAACTTAATATCGAAAGCACAATTATACCTGTGTG
CACTTACATGGTTGTCCTTGCTGTGGATAGCTGAAACACGCCAGCTCTGCACAGGCATAA
GACTCCATCATAATGTTGAAAAATCGGCGAACACCAGATAAATCATTCCTCAACAACAGC
AAACCTGTATTGTATATCCTTCAACAATACTTCATGATCAGATATCAAGAGGCGAAATCA
AACGAAACACCCAGCACTGTACTCTGTTAACAATAGCCAAGACATGCCAGATAAGCTAAC
TCATTGATGTTTGCCACCCTAACCAAAAGCAGATAAGAAACACTCTCTTATTGAGGCTAG
CAGATGAGATTCTTGCTGTCGGCTGCCCTGTTCATCATACCATTGCTTCTGCCTCTCCGA
TACAAATACAGGGAGAACACCAAGGCTTCAGCACCAACAAACTGCAGGTCATCTTGACTA
CCATTGTCTTCATTTTTCCGCAGAAGAAAACAGCACCAAAGCTTCAATCTCCAAACATGG
CTTACCATCTACGATCGGCAAGCGTGCCTTCAAGCCCTCGCTCGAACAAAACAGAAGTCG
AGCAGCAGCTCCAGAGCCTGAGCACAACCATCTCTTCGCCCTCGGCGACCATCGATACGA
TGTGCGATGGTTTGAGGGGGCTGGCATACATCTACAGCTGCATCGAGAACATGATGTGCA
CACCAAGCAGCCAAGTCAGCCTCTGCCAGACCCTGCAAAGGGTAGCAGTGGAGGCAGAGC
TTGAACGGTCCCTCGTCTTGCTCGACCTCTGCAACGCCATGCAGGAGAGCTTCATGGAAC
TGAAGATGACTATCCAAGAGCTCTTGTTCGTTCTCAAGAGAGGAGAAAATGCAACTTGTC
AAGTCAAGGCGTACACCCGGCTAGCCAAAAAAGCACAAAAGCAGTTCAAGAAGATCAGCA
AGAAAACTGCTTCCGACAAGAATGATTCTAGGGTGGTGATGCTAATGGCAGAAGCGAGAG
AGATCACCATTTCTCTGCTCGAATCCACATCCTCAGTCTTGTTGAAGCAAATTGAGATGC
CCAAGTGGTCTCTTGTCTCCAAAACATTGCAGAGGAGCAAAGCCGTGTGCGAAGAGGAGC
AATTGCAGGCACTGGAGGGCAGTATAGGAGATCTTGAGAGTGGAGTGGAGCTTCTGTATA
GGAGATTGATCCACAACAGAGTTTCTCTTCTCAACGCTCTTAGCTCGTCCTCATAGATAC
CCTGAGTTCTAGTTCCCTGCGATTGGCATCCACCTTTTAATGGACTATAGTCAATCATGA
TAACAATTTTGCAGTATGTACAAGTGTAGAAAGTTTGCTGAACCGAAAAGCAATAGTGAA
CTCTGTCAATTTCATTTTTCCTGAATTTTAGCATCTATGCACATTTTTTTCAATTTGCCA
AGCCTGGAAACAACCACTATTCACCCTTTGTGACCATAGAAGCAACACACAATAGTTCGA
GGAGACTTGTAGCAGCATACAACTGCATCGAGGAGGTTGTGTGCCTGCCCAGCAGCCAGG
TGACCATTTGCCAGGCTCGGCAATGGAAGGTGTTGAAGTACGAGCTCGAGCAGTCCCTCA
TATTGTTAATATCTGCAATGCCATGAAAGAGAGCTTCGATGAGCTAAAGATGAATGTTCA
GGAGCTGCATTTGGTTATGAAAAGGGAAGATGACTCGACCGTGTGGCTCAAGATTCAGTC
CCACATCCGCTTGTCGAGCAAGATGCAGAAACATGTCAAGAAGGTTGGGAAGGTAACTGA
TTTTGATCACAATGACAACAGCAGGGTGATCATGATACTTACAGAAGCACAGGAGACCAC
TGGCCATGCTAAGGTTCTGGCAGGTGGTGTCTTATTTTTTCGAGAAAACGCAGAGATATG
CGTTTCTTTGTATTGAAAAGAGGGAAAGTCAGCCTCCGTGGAGACGATTACAGCAGGTTA
CAAGTAGTTCAATGGACATCCCAGGATGGGGGCAAGACTACCCTAAGCCCCTTGTCCCCG
GCTCTAGCCCAACACCTCATCTCATC