Contig Data
morexGenes
Links



Map Locations of contig_37913 (5498 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_37913

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_52930 1 987 bp AK362916 Available Available None





CDS Structure of MLOC_52930






Contig Sequence (5498 bp)

>contig_37913 5498 assembly3_WGSMorex_rbca.fasta
GTTATACGAGCTGCACCATTGCTACTACTTGTTANNNNNNNNNNNNNNNNNNNNNNNNNT
CACCTCACTACAACATCACTTGTTAACGCTACTTTCAGNNNNNNNAGTTATTACCTTGCT
GAAAATCGCTTATTAGAGCCTTCTGCTCCTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNCCCCTATACTTGTAGGTCATCACGCGTCAAGTTCCGAAATGGGGAG
AGGAGAGCTCGTAGACCTATTAATACTCGTGGCGCTCGGAGAAACCCTAGATCCACGCCA
TCCATGGCGGTCAGATCCCTCCATCCCCACTTGTCAAGCATCTGGGACATGGTGGATCGG
TCCATGCCCCAGAATCCTTGGCCCTCCTATCAGATGTGGGGGATGACGGCGCTCACCCCG
CGTGCCCGTCCGAACGTTCTCGTGTACCGCAAGCGACGTGGTTACCCCGCGGATCGGATC
GTTGATTCGCCACGCGCCGACGAGCCCTCAGCGGTGGCACCTGCATCGACCACCGGAATC
CTGTCCCGAACTCTGACGAGGTGGCACGGGAACAAGATGATGTGGTCTATGTCCATGAAC
ACACCTTCCCGAAGTTGAGGAGCACGACACGCAGTGCATCCTTGCGTAGTTAGATGACGC
CGTCAGCAAGCGAGATCTGCCGGGCGGTTGCGAGGTCCGCTGCGTATGTCGCACGCCATC
AACAAGCTTTGTCCCGTCTTAATTATGATGCTTCTAATCTATACATTATTTTTCCGGCAA
CCATATATTGAAGAACTATTGCCGTCTGATTATAGTCCTACCCATTTGGAATAAACTACT
ATTGATCTCAAAAAAAGAAACAGCTAGACAGAGAGTAACACAGAACCAGAAAAACTTCAA
TTTACAAAACCGCATCTAATTCCGAAAAAGGAAACACAAATGTTCATAACGCGCACGCGA
GCGAAAACCAGAGGCGCTTAACGCTTCCGTGTCAACCAGATTAACCGCAAAATATATGTG
GCACAGCACGAGGGAGACGGTACCATACGGCTCAATGGACAATGATGTGACATGGACGGA
CTACGGATCCGGAGAGCGGCCTCACTGTAAACCCTCCACAGAGAAGGCTGTCGGTGCCAA
ATGACGACGTGGCACCTCGGGTGTAAAACAATCGTGCACACTTTCACTTCTCGCTCGCTG
CACACTTCCTTCCTTTGTGTGTATATAAGAAGAACCAGGACGCGCGGCAGAATTTGCCAC
CGCCGTAGTTTGTTGCTTTCGATCTTGACTCGCGAGATCAAGCCGGAAAGGGTGGTGCAC
GAGCACACAGGGTTATGGCTGACGAAGCTAAAATGCCCGCCGACGCAATGTCGACGGTGG
CGGAGGCGGCGCCGGTGACGGCCGAGCGGCCGGTCCGGGCAGACCTGGAGACGCAAATTC
CAAAACCCTGTGAGTGCCTGCCCCGTTTCTTCCGTCCGTGCGTCTGTTTCGCACTGGTTT
CATCAGCAAGGCAGAAAGCATAACTAACAGTGCATGGAATGGATCCATGTGATGTGATGC
AGACTTAGCTCGAGCTCTGGTCGTGCCCGATGTGTACCATCCTGAAGGAGAGAGCGGGGA
GGGGCACGAGCATGGGCACAAGAGCGTGCTGCAGCAGCATGTTGCCTTCTTCGACCTGGA
TGGCGACGGCATCGTCTATCCCTGGGAAACTTACAGAGGTATTGTTGTACTTGTGGATGT
TGCACAGTATGATGGCCTGTTCGTAAAATTCATGTAAAGAGGTTCAATTAGTTTATGGAA
TTCGCTTGCATTATTTCTCATTCAATAAGCACAAGCATGCTAATTCAATAAGCGGGTGTT
GCATCAATACATCCTATATATATGAAAAAATGAGAAGAAAGAATAAGGCAGATGGATGGA
AAGTGATGTTTTGACTCATAGGTGAACGGAAACTAGTGAGTTATTAACATCGTATTTACT
CATAGGAGTAGTTTAGTCACGGTTTAGAAGGCACAGTTAAATTTGCGTGCGTTTTTAAAA
TAGACAACGTTTAAGGCACGAAAGCAATTACTCTTATTAATTAGTACTAGTATTACTCAT
GCATGCGCCCTCTCAATTTGCTGCTCACGCATTAGTACTAGTATTTTTTCAGTTGATTAG
GCGCATTAGCATCTACACCTGCTACATCCCACAACCAATCGGTGACTATCTTGGTCCTAG
AGATTTTCCAGGTGTGTCTTACTTCGTCCCAAAATAAGTGTCGCAAATTCAACACTAAGT
TGATACAAATTTTTATACTAGACCAACTGCACTTATTTTGGAACGGGGTGATATTAAAAA
CGCATAGCTTTAACGAGTGGGCGCTTTAAAATTATAGAGGACCAACAAACCGATATTTAA
AACTTCAGTTAATTCTAGAACCACAAAATTTGACAGTAATTGCTTTAGTTATGTACTTCT
ATTTCGTGAATTCCAGGAATTCGGGCATTGGGCTTCAGCGTTATCGTGTCGATCGTATTG
GCAATTGTCTTTAATATTGGTTTCAGCTTCCCAACTCTACCTGTAAGTACAAAAAGATTT
GAAATGTGATTACCATATTATATATATTATACTTGACATTTTTTTCCATAAGAAGTTTCA
CCAAGCTCTTCTTCATCCTTTCTTTTCACGATGTGTGTATACAGAGCTGGATACCATCTC
CCTTGTTCCCCGTATACATCAAGAACATACACAGGGGTAAGCATGGTAGCGATTCCTCAA
CTTACGACACAGAGGGAAGGTAAATCCACGCTCCAAACTTGCTTGCTACTAGTTCAGAAC
GTTGTTACACCATCTTTCAGTTCAAAAAGAGGTATGTCAATTACAACTGTGAAACAAATA
TAGGTTCATGCCGGTAAATTTCGAGAGCATCTTCAGCAAGTATGCCCGCACGGCGCCGGA
CAAGCTCAGCTTCGGCGACATCTGGAAGATGACCGAAGGCAACCGGCTGCACTTCGACTT
CCTTGGATGGTGAGCAGAGCACTTGCGAATTCTCATTTCATCGGCCGTTTACTTGAGCTG
CTTTTGTTGTTTCATACTGTAGTGCGCAATAATTTGGGAAAATAAATGAATTAGATGGCA
TCAAACCATTTGGATTTCATCATCTTTCTGTTTCACCATCTTTCTGTTTCATCAGCAGTC
AGTGACGCGAAATGGACTGTGCAAGCGTTGTTTCACTCATGTTTGGTATTTAACTCGTGT
GCATTCAGGATTGTGAGCAAGGGAGAGTGGATACTGTTGTACGTGCTTGCCAAGGACGAG
GAGGGCTTCCTCTCCAGAGAAGCTGTTCGCCGCTGCTTCGATGGTAGCCTGTTCGAGTTC
ATCGCCCAGCAAAGGAGGGAAGCCCACGACAAGCTGCACTAGATTCTAGAGTGCAACACT
GTCATCTTCGTGAGTGCGACCAGATTGATTAATTACCTCATGTATGCCTATGAAATAAGA
GAGGAACGGGTACGAAGTTCAGAGAATACAGTTGTGCCTCAATAAAACTCGAGAACACAA
ATACTCTGTACTATTAGTGATTTTCTCAGTGTTATATTTCCTTACTACTCAACTTGGGGA
CCTCCTAGCAGACGAGCACACCCGTTGGTGGAGGACGAAAAAAAATGAAGGTAAAGAAAA
CCCTAAAGTGCGTTGTCACGGACTTTAAAAATATTATAATGCTATTCACGGAACTAAAAT
GACCGAGAACAATGTCATCTCAGACTCCCAGCTAACACACATTTTCTTTTTACAATCAGC
TAACACACACATCATATTATCAAACACAATAATATGTTATTCGTAACTTAGAAAATATAT
TTTAGGCTAGAATGAATTGTGTGTTATTCATTTATTTCGGCATGGTCCGAGTCAAAACAT
CACCAATAAAATCAGGCGGGTATGTAACCCAAGTTTTAGATGACGTATACACACAAACCT
GTTATGGTATCTTCCACCTTGTTTTTTTAATTTGACATGGGAAGCATCTCCTATACTTTC
ATTGACTCTTTTCTTCTCTATATGGGAAATTACCCCAAATGACAAATGAATAGGTGTGAA
AGTTATAATTGTAAATAAACCATGATCGAATCTATGAAAGTGTTGGTTTATATGTATCTT
TCAGTTTTGACTCTAGGCCCTAGGGATAAAAAAAATGCTATCTTGTTTCGAGAACCACCT
AAGGTTCCACTAACTCAACTAAAAGAATCAAATAGTTTCATTTACTCCTTGGATAGCCGA
TAAGCAGCTCCATTAACCAAGCATTTCACCCATGCCACCCTGAACTCCTCCTTTGATTGG
ATGCACTCCTTTACCTCCACAATAGGTCCATAGACTTATTTATCCATTTCTGAACTTCTT
AACTTAGCCGCCATTGTTTTTTGAGTCTGTATCTAAGATAAGCTTTGCAACAACCAGCTC
CACTTAAATTGACCAGCCCGTCTACATGCCTTGAGTTCAGCCGATTCAAGGTCCGTAATG
AAGGAAAAAAAAATGGAAACGCCCCCGCCTGAAATATTATATATGCTATAATCCATGTGT
GAGCGCATGTGTGTATTGGTGATGTGCATATGATGTTATCGGAGTTTCTTTAAACTTTTA
TCAAGACATAGACCAATCATCTTGTCCTTTCTTTAATTCAAATACGAACACATCATAGAA
AGCCTGAGTACGTTCGTGTCAGCTATTCTCATTCCCTGCCAGTCGATTTCATGTGTTCTT
TGTGCTTTTAGCTGTGGGGTCTACGTCTTTATTCGGCTTGGCCCAAATCTGAGTGGTCTG
TCTTCACTTGTCAAATATGCATGACTCACGTCAGATTCAAGCATCCTTAAGGCAAATACA
CTCTAATTGTAAACAACTTGAAATATTGTTCTGTTTCATGTGTTCCAGGAGTTTAAATCT
TCTTGTACTTAGGGATACACATGTCATAGCTCTTAAGATGCTGAAATATAAATCCATATA
ACGGCAAGTACTCGAACCATACTGAGCAATTATTTTCTATGTTCAAAACACTATCAATAG
TTCCATGTGAAACACAGTTCTAAAACATGACGCATTTATTATATTATCCTAGAGCATTTG
GAAAAGGTTGATGTGTGTACTGGTATTTTTAAGAGCAAGACAAAGCCCCCCAAAAACCCA
ATGAGATGCCGATCGTTTCAGTAAAAATATTAACTTGCTTTCCTAAAAAAACAATATTAA
CTCACTCGTGTTATTATTCCCGAAAATCTGGGTCTGAACTACTCGAGAAAACCACCTAAG
AAATAATTGCAAGTGATAGCGGAAACCGGTGCCCTATAATAATCTTAAGCACCTGCCCCC
GAGATCGCCCCCAGGGGGCTACATGATGATCCACAAGTGTAGGGGATCGCAACAATCTTC
GCGGGTAAGATGACCCAATTTATTGATTCGACACAAGGGGAGACAAAGAATATTTATAAG
ATTTAACAGTTGAGTTGTCGATTCAACCGCACCTGAAA