Contig Data
morexGenes
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Map Locations of contig_37900 (6564 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_37900

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_52908 1 835 bp MLOC_52908.1 Available Available LOC_Os03g14580.1, FRAME:+3, EVALUE:1e-24, 13103.m01705 protein expressed protein
MLOC_52907 3 5176 bp MLOC_52907.2 Available Available LOC_Os03g14590.1, FRAME:+2, EVALUE:6e-154, 13103.m01708 protein calcium-binding EF hand family protein, putative, expressed
MLOC_52906 1 133 bp None Available Available None





CDS Structure of MLOC_52908






CDS Structure of MLOC_52907






CDS Structure of MLOC_52906






Contig Sequence (6564 bp)

>contig_37900 6564 assembly3_WGSMorex_rbca.fasta
AGGGCAGAAGCGATAGCCCTTTCGTGTGTTTTCTGTCAGTCCAGATGCGTTTCTCTTATC
CAATGCCATAGGGGCCTCTCTGCAAAAATGAAACGTTTTCCTGTTCGTAACACATAAAAA
GGTACTACGGGTTTAATTACCTAAAAGATAGGGTTTAAAAAAAAACAACAGCAGTGGGTT
TTTCGACGAAAGCAATAGCCTCTTTATTATTAGGTAAAGATATATTCATTCATTTTACTT
TTTATGTAGTCTTCTAATGAAATCTTTAAAAGAATTTATATTTATAAACGAAGGAAGTAA
ATACCACTGGGAATAACTCTGGGAATAACTCTGATCAACCGGAGATCAAGCGCGCGCCAA
CGGGAAAGAATATACATGTATTATCCCGGCGAATTGCAGCCCTCGTCGCCGCCGCGATCC
TGCCACGGTGCCGTCGCACGAGATTACGTTCGGCGATACAAAAAATCAGGCCAAGTGGTC
GCCGCGCGTACGTGTCCCGCGGCACGCGCGTTATCCAGCCGCCGACAGCGCCAAACATTT
CCCCGGCCGGCTGCTTTTATTCCCTTCCGCGTCCCTCTCCCGCTCCCGCGCGGAGCGGAG
CAGAACCAAACGCCAAGACGCAAAGCGATCGAGGGCTTCCTCCCGATCCTCCTGTCCTGT
CCTGTAGCCGCGCGTGGGAAAGGGGGCCGGGAACTTTTCCTCGGTGCGGCGGCGGCCAGT
GCAGTCCGTCCATATATATATATAGCGATGGAGAGGGGCTGGTTCGGGTGGAGGAAGGCG
AAGCAGGGCGGGGGGAAGGAGGAGGAGGGTCGGGCCAAGGTGGTGGTGGACGGGTCCGGG
ATACGGCAGCTGGTGGAGGACCGGGAGGCGTTCGGCATGTTCGCGGAGACCAAGTTCCGG
CAGCTCGACGCCGACGGCGACGGCCGGCTGTCCGTGCGGGAGCTGCAGCCCGCCGTGGCC
GACATCGGCGCCTCGCTCGGCCTGCCCGCGCAGGGCTCCTCGCCCAACGCCGACCACATC
TACTCCGAGGTACGTACGTTACGCATGTGATGCGCCATAGCTGATCAGCCACTGTACCAG
GTGGAGTCTCATACTCATGTGTCAAGCGCCGAACTGAGTGCGCGCCATCGAACTCAGAAA
TTCGCATGCTTGCTTGCTTGCTTGCTCTGGCTCCCGAGCTACGGGATCATGGCTGGCGGA
GCCAGACCATTTGTGCAGCCTGGGCAAGGTATGAGAGCTGCAAGATTTAGCTAAAATTGC
CCACAAAAACTCACGGTGAGACACATAATCCGTAGAAAAATTAGTGAAGGATTGTCAAGT
GGAGCCCGGGCAACTGCCCAGGCTAGCCGGGCCTTGGCTCCGCCACTGATAGCTCGGTTT
GCAGTCATCGTGCGTGCGTAGGTAGCGTCTGCACCAAAGGTTCCTGTCCGAAACATTCGG
TGACACCTGAACTCACTCCCAGCCCCAGCAGAATTCAGGATGTACTGAATAAATGCTTTT
ATTTGTCACTTTGCAGTAAGTGCACTAGGATGCGTCGGACTTTTTACAATATGTTGTTCA
AAATAGCTGCAGAAGCAGAAAAAAATTGTCTGCCAAACAAGAAAATAGGCAAAAGCTGAT
CGAAATAGCTGGATTACCTTAATCCACCTTAATGCCAAACACAACCTCAGTTCGTGGCAG
GTGTGGATGTGTGCCGCAAACATTCGCTCTAATTTAAATTTAGGTGTTTTTCGTTCGAAA
GATGCAATAGCTCTTCGGTATTCTTGTCCTTTTTATTTCAAGCATGCAATGTGCTTTCGT
GAATTTAACTAGCTAGATCTATTTATTTATTTTTATTCTTTGTTTGTGTGTGTGTGTGTG
TGNGTGTGTGTGTGTGTGTGTGTGTAACAGCTAACAAGGTAAGGTCCCAATTCTATTATG
CTTCCCTACAAATAATTGCATTGGTTCTTGCAAGGATATTTATGAGACATATCACATGCT
CAAGTTCTCGCAATAATGTTCATCACATGTAGTGACTTCAGCTGGATAACCTGAAAAAAT
CAAAAAAAGATAGCAACGTTCTATGGGCCATAGAGAGACACCAGGACATCGACAAGTGGA
TAAAAAAGTTGTGGTTGCTGGCTGGTGTACTTAGCAGGCGATGATCCTACGTTTGAAGTC
GAAACCCTTTTCGCTATCCAGTATCCTACACTGATGCTTTGGCCGGTGAAGATTTTTGAA
TTCAATGCGGGATTCGGGTTTGCGCACAAGTCCGCGTCGAGATGCCCTGAACCTCAGTTC
AGGCACGCCATTGGTGGTTTGGAGCGGAACCTAAAACATCACAATCCGAGCTTTTATCAG
TTTTTCTCATCCTCGTCACCTGGATCATTTACTACAGATCCCGTCAATCTCTTCTTAAAT
TGGTAAGATTAATTAGTCCATCAGGCTCGACAACACATTTCTGCCGCCGAAAGACCACTT
TCTGCCTGAATTCGCATAATCTCAGTTAGCTGCCAGGTCTAACTTCAGACAGGACAGACA
CTTGGACAGGCACTTGGATGGAGACTGCCCTGATTTTGAGTTTCTCAAACTTAATTTTTC
CTCTCTAAACATCTATGTTAAATTTTAAACTCCTTTTTCCCCAAGACAGATATACATGAA
TTCCCATAATGTAAGTTGCCAAGTTCAAATCCAGACAGGATCCTCAATGGAGACCACGCC
GATTTTTTGCTCCTAAGACCAGTCCAGAGACTGGCTTATTTGTTTGCTCTGTCGACACTC
TAAAGTGTCTGGGTATCTTCTGCTGCTGTGCCTGAACGCCACATTTCTGCTCTTTTACTG
ATGTGCAGGCTATGAGCGAGTTCACTCATGGTCACGGGAACCAGGAGGGGGTGAGCAGGG
CAGAGTTCCAGGAGGTCCTGTCCGACATTCTCCTCGGCATGGCGGCCGGGCTCAAGAAGG
ACCCGATCGTGATACTGCGCATCGACGGCGAGGACCTCAGGGACTTCTTGTCCAGCCCAA
GGTATGAGCCGGTAGCCGCTGCCATCTTCTCACAGGTTGGGTCTGAAGATGCCCCTCTCC
GGCAATGCCTGCTAGCCGCCGTTCAGCAGCTTGGCGTCGACCACGGAATGCCCCCAGCCG
CTGACGCTTGGGTAAATGAACGAATGAACACTCCCTAGTCCTAGCCACGGATGTCTGAAC
ATACTAGATATGTAAGATTTGTACTGCACTGGCAGGTGGTAGAGAACGTGGTAGAGCCGG
CATTGCAGCAGCTCCCCGCCGATGAGCTCGAGCGACGGGCGTCCCGGGACGTCTTCTTGG
AGCAGCTGAAGAAGCTGCTGGCCGGCGTCGCGGAGCAGCTTCAGGAGCGGCACGTGATCG
TCGCGCACACGGAGAACACCTTCGACGGGAGCGGCGTCAGGAGGCTGCTGGGTAACAAGT
TCGAGCTCGACAAGGTACACGATCAAATCCAGAGAGTGACGAGGCAGTGGTGTTACTGTT
GTCGGCAACACTGATGGCCTATGGTGGCGTGGTAGCTGCTGGATTCTGTGTGGAGGGAGG
TGCCGGCAGAGCACAGGAAGAAGGCGCCCAAGGACAAGGAGCACCTGCGGGTCGCGCTCG
ATAAGATGGCCGACGCAGCAAGCTTGCCACCCCATGGCGCTGTTGATCGGGTACTGATAC
TGGCTTTTGTTTCAGCCGGCACAAACAAGACCGTGGTGTGGTGTTTACTGGAGAATGAGC
ATGGTTTTGATTCTATGGTTCTGATTTCTGAACGTGGCGCAGGTGGACGCCGTCGTGGAC
GAGGCGCTCAAGGTGGCGGACGCCGGCGACGGGAAGGCGGTCGAGGAAGCGGAGTTCAAG
AAGCTGCTGACGGACGTCCTTGGGGCCGTGATGCTGCGGCTGAGCGGCGAACCGATCTTC
TTCTCCACCAGCACCGTCGTCCACGAGTCGATGCCCGGCTCGTCCGCCCTGTTGCCGTCG
CCCGCGGTGGCATCTCCGCCGAGCGAGTAGCAACGCGCGCATATAAAAGGTAAATAGTAC
TGTAGGAGAGTGGGCATAAGGCCTCTCCGTAAGCGGTGCATGTGGTTGTGTTTTTTATCT
GATCACGAGCATTCATGCTTTGCTATGGTTTGTTGGAAACTGACGGAATGCAACGCTGCA
GTTCGTCAAGTACTCCAGCAGTATGTTGACACTGGTTGGTGTAATATAAGTTTGGAATAA
GGCTTCCAAGCCAGAATGACACATTGTCAATGCCAAATGTTACTGCATGCGAATGCATTC
ATCTGTCTTTCGATGAAAAAATGGGAGAACAAACCCAACATTCAGCTTTCATTTCCAATA
ATAATCAGGAAAAGAAAGTAATCTTTGGGCAAACTTCGGTAGAATTCGAAGCGAAAAGAA
ACACATGAATCACTATGCAAGCACTGGAAGACGACATGTCAGCTTCTCCTAGGGTTCACG
ATGGAAGACACAAAATACCAATCACTGGGCAGGTACTGCTACACCTCAATAGTTTTGATC
CAGAGGTTCATACTCATCACAGCGTCAGTGCATGGAAGGACAAGATCAAGATTACGATTA
CTCATTGTTTCCTAACGTTCATACTGATCCAGCACAATGTCAATGGTAAACAAAGGGCAC
ACCTTGTTTAATGATCAGATGCCTAGCTAGAGATCTTTTGCTTCTTGGGCTTCTTAGACA
TGACAAAGTCATCATCGTCGTCGTCATCTGTGTCGCTAGATACCTTCCTCTTCTTTTGTG
CTGTGGTTTTTCCCTTTGTGGCTGAGTTGGTCTTGACAAAGTCATCATCATCATCGTCAT
CTGTGTCGCTAGATGCCTTCCTCTTCTTTTGTGCTGTGGTTTTTCCCTTTGTGGCTGAGT
TGGTTTTGACAAAGTCATCATCATCGTCGTCATCTGTGTCGCTAGATGCCTTCCTCTTCT
TTTGTGCTGTGGTTTTTCCCTTTGTGGCTGAGTTGGTTTTGACAAAGCCATCGTCGTCAT
CGTCATCTGTGTCGCTAGATGCCTTCCTCTTCTTTGGCGCCATGGGTTTTCCCTTTGTAC
CTGAGTTGGTTTTCTTGTCACCTAACAGCCGTACCTTGGTTGGAGAACTTGCCCTTCTCG
GTGCAGAAGGTGGTTTGACAGGGGACTTCAGTTTCAGAGCCTGTCTCTTTGCAAAGACCT
CTGTAGCCACATCCAGCGGTAGCAAACCCCATTCCATCAACCTATGTACATCCAAACGGT
TACTTACTTTACATCAGAGGAAATATTAGTGTATGCAACAAACCATACATTAGATGAATA
ACAATTCAAACACACAAGCTACAAGTAATTAGTGCCAGAATGAAATATTATGCTAGTGTA
TGATTCGATCAGGAGCGACTGGTAAGTGGAAACCTAACTACTCCCTCTGTACCTAAATAC
TTGTCGTTGGAGAAAACCAGTACAAGTTCCCCCGGCGACAAGTATTGTGGTACAGAGGGA
GTACAAACCAGCAAGATTTGTTAACTAGTGAAACAAGGTCACAACTGACTTATGGCACTC
ATGTTTACCCAAGAAAAATGGACCTCGGCTGCAAGCAGCAGAACTCGTTTCATAACAGAA
ATTGAGAGGTACAGGGCAGAAGCATACAGCCTACACAAACAACACTCACACCACCAAGCT
GCTTTATAGTTCAAGTGTTCAACAGTAATGTGTGCTAAAAATGTTCTTATATGGGACCTG
CACCAAGCCACATACCAGTTTTTGGAAAACACAGACTACTAAGCCAGGATTTTATTATCG
GCGTAAGCAAATAACCATTCAGATTCTGTAGCTGCCCTTCATTATTTAACACCATAAATG
AGTGGAGATTAAATATTCAGGTCCTTTCAAGTTTTAACTAAACTTGGTTCACCTTTGATA
TTGCATTAATCTACAGCCACCGATCATAATAGCTTCATGTTAGTGCAAGACACAGTGATC
ACTTTATTGTGTTCAGAAATAGTTTAACAATTTCAGATTGCTGATGTTCCACAAACACAG
AATTGCATTATCATTCGAGCACAGTGGTATAAGTATTGTGCTATATGATTAATTGTAGTA
AGTTCAGTATTATATCAAATTTAGAGAACATGTATATAAATATGAATGTGTTTCCATTTA
TATTATCTAGTTTCCCAGCTTCTAAGAGGAACTCTAACCCATCCCCAAAAATCCTTACCT
CGACAAAAATTGCCATGGTTGGGAGTTAGACCCACCTAACCCATCCCCAGTACTCCTTCG
AACTCCCGTGAAATTTTCGATAGCTCCCAAAAAACAGCTTTGGGAGGTATTGCTCCCTCC
CAATACTTTTTTTGGCGGGAGAAAGTTTCCTTCTCCGTCACCTCCCGCCGCCACCAAAGT
TGCCGACGGCAACAACACCGGCCATGTCGTCGGCTCGAGCCACGCCGCCACCTATCTCTG
CCTCCCAAGCCATCAAGCCAGAGTTCGGGCTGCCACAGCCGCCGCGCTGAACCACCCCCA
CCTCCCAAGCCAAGAAGCAGCCTTCAGCGTCGTTGAGGCCGGGAATCGGTCATGCCCCCC
CCCCCCCCCGCCCCCCCCCGCCCG