| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
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Predicted Genes from contig_37823
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_52822 |
7 |
4425 bp |
MLOC_52822.2 |
Available |
Available |
LOC_Os01g41650.1, FRAME:+2, EVALUE:0.0, 13101.m04272 protein pentatricopeptide, putative, expressed |
| MLOC_52823 |
3 |
1057 bp |
MLOC_52823.1 |
Available |
Available |
LOC_Os01g41660.1, FRAME:+3, EVALUE:3e-152, 13101.m04273 protein phosphoethanolamine/phosphocholine phosphatase, putative, expressed |
| MLOC_52821 |
3 |
3260 bp |
MLOC_52821.2 |
Available |
Available |
LOC_Os01g41640.1, FRAME:+1, EVALUE:0.0, 13101.m04271 protein expressed protein |
CDS Structure of MLOC_52822
CDS Structure of MLOC_52823
CDS Structure of MLOC_52821
Contig Sequence (9182 bp)
>contig_37823 9182 assembly3_WGSMorex_rbca.fasta
TGATAAACCTTAGGTCATCCATTTAAGGAAAATTTGCTACCGTCCTACAAAACTCTGCGC
TTGGAGGCCCAACACGAGCCTACAAGAACAAATTGTGTAGTACACGTCACCTACCTACAG
AATGCTTTGCCAATGCAAGTTTTTGTTTGCCTCGTGCTCAATGTATGTGGAAAAGCTAGG
CGTCACTTAAATTTAAAATCTTCATATGGCTTGTTATTCAATATCGAGTCTGGACCTCCG
GCCGTCAATTTTGGTATGGACTACATGATGCTACCTCCCCGTGCTTCACTAGCTACGAGG
ATGAGGATACTTTCAACCACATACTTGTGTATTGTGTTTATGCATGACAGACATGTCACA
CATGTTCTCTACACATGTTCTCTACACTGACATCCGTGTTGGCATCCTCACCTTGGAGGA
CACCTTGGAGGAGTGGTGGCTTCGTTCACGCCAATCTTTACTGAAACCATTCACACAAAG
TTTTGATTCAATTGCTATTCTTTCGCATGGAGCCCGTGAAAACAAAGAAATGCGAAGATG
TTTGAAAATGTGGCTTAGCAACGCAACATCTCTAGGTTTGTAAACCGTATTCTAGATTAG
ATATAGACATAGAGAACTGCATGAGCTAGGTGTTTTAAAATCTTTATGAAAGATTAGCAT
GTAATAGACGTGTGGATTTGTGGATGATTGCCGATACTTTAGCTTGTTTTGCTTCTTGCA
TCTTTTGTAACGTATTTTCTGCCTTCTACAAAAGATATGATACGTCAATTTGCATACGCT
TGAAATTTTTTAGCTTTATTTGTAAAGTCAAATATATGTTTTTCATTAAAAACACACACC
CTAAATGACTCTTGGCCCCGCTAAAAATAAATAAATTAAACTGACTCTTGGCCCGGTTGT
CAGTGTGATCCCTTCCCATCCCATCTTTCTTCTTCAAACCTCCCACGGCCCCGACCATCT
TGGATCTTCCCCACAACCGAGCCCAAACCCCGACCAAACCCCTCGACCGCTTGGCTTCTC
CCTCGAAACCTCACTCACCTAGGGTTAGGGTTTCAACTCCACCGGCTGCTCTCCCGCTCC
AATTCGAACGAATCCTCCTCGTCCCCCGCATGGCCGGCGGCATCCTGGTGGACTTCCCCT
CCATGGGGTCCGCCTGCTTCTTCCCCAGCCTCGAGTCCCTCCTCCGAGACTCCACCTCCC
GCTTCCTCGCCGCCGTCTCCGCCGCCCCCGACCCGGACCTCACCAACTTCCGCTCTCTCT
TCTCCCGCGTCCTCAACACCTACCCGGACCCTCCCCTCGAGGCCGTCTGGTTCTTCTCCG
CGCTCACCTTCCACGACGCCCCCGACGACCTCCGCTCCATTCTCCACCTCCTCTCCGCCT
TCACCTCCTCATCCCCTGGCGCCGCCAAGCCCCTTGCGCTCCTCGCCCCCGTCGTCTCCG
AACTCTTCCACTCCGCCAAGCCCCGCAGGGAGATCGAGGCGCTCGTCGAGGCTGTCCTCA
GCTACATCAGTATCTGCAGCAGCCGCCCCGCTGGCGGCGAGGTCAACGCCGACGCTGGGA
GGCTCTTGCCAGGTTTCGGGGAGCTGGTCAAGGTGTGGAGCGTGCGCAACTCGAGGGACA
GGTGCCCGTTCCAGGTGCTTTTCCCGCTAGTCGGGGAAGAGGCCAGGCGGGAGCTGATGA
AGGACGGCTGCAGCGTCACTTTCCTCGCCGGTGTTGTGGTGGCGGAGGCGTTCCTGCTCA
GGCTCTGCCTCAAGGTGCAGGGTGTGGCTGGGTTACCACGTTCTGAGCTGCAGAAGGAGC
TAAGGATCTGGGCGGTTAGCTCTATCTCGGTCTTCCAGAACCAGCAATTCTTCGGTGAGT
TGATGCTGCCCATGCCCTTATTGTGTCTTGTAGCTTCAGGTTTAGTGACTCCACTGAGAT
AAACATTTTGCTGATGGATTTTGCAGGAGTCCTGCTGAACATGCTTGTAAACCCTCCGCT
GCCTGTTTATTCACTACTGGTATGTGTTCCTTTTCAGAGCATATCACGTCGTTGCAGGGA
ACACAAAAACCTAGGAATAGCCATGAGCATAGACCCATCCCTTCAATTAAGGAATACGGG
GGCTGCTAGGCGTTGCCATTATCTGTTGAATTAGTTTGCTAATTGCCCTACATTACCCTT
TGTGAGATATGAACTGTGCAACTTGTTCCTTTGTACTTTGATTGTGTTTGGACTCAGGGT
CTTTCTTGTGGATACTAGAGAGGAGAACAGTATCAGGACTACCGTATTTCACATTGTATC
CATGAGGAGCCTTACTTGGGGTGGAATTTGTATATCATCTTTGCGATGTAAACTTGTTGA
AGTCTGATCTGTGATGATCTTATGCCCTTCCCTTCTATTTGAATCATCATCACTATATAC
ACGCATATGCTGTGTAGTGTGAGCATTGCTCATGTTTACTTATTTTAGACCACAAACTGT
TGTGCAGGCCATGCTAATGAATTAAGTCGGCCAGCATTTTCATTTGTTTGCAGATTTACT
GAATTAAGTACACAGTTATACTTGTTTATCCTCGAATAGTGTCTCCTTGCTCAATTTCTT
TCGTTTAATGTGCCAATATCTTTCATAAGAATGAACTAGTTGTTCACCCCTGACGTAATT
TGAGTTGTGATGATGGCATTATTATTTCTTACATATTATTGAAGTTGTAATTTGTTTTTT
GGTGCATAACTCAGAGTGCTGATGATGAGATCCTGGTGAGAGATGTCCTTTATGATGCTT
TGATCTTGGTGGATTATTCATTCCTCAATGGAGCTGAAGTTGATCAAGCTGATAGTTCCC
TTTTGCCTATTTTTGTGTCAAGATTGGTTATAACTCTTGATGCCATCAATGATGCCAGGT
GATAAAGAGTTGTTTTACCTAAACTTGGCTGGTTGAAAGAAATTTTCATCTGATCTGTTT
ATTTATTTATTTTTCGAAATAGGGGCAAAGGAGATCAAGGGAGAGCAATGTCGTTTATCA
ACGCCTTCTCGACTTCCAATATTCCCATTTACCTTGCTAGGTGGGCTGCTCGTCAAGCTG
GCACCGACCAACTGGGCAAACCAATTGCTATCACACCTCGAGCTTTTCTGAGTATGTACA
TATTTGACACGATCCTGTCAATTTTAAGTAACAATAGATGCTTGTTATTGTGTTCTATAG
AGTCGGTGCTGAAGTTGTACGTGGTTTCTTTTCACAGAGTGGCTTGTAGATCTTGAAGAT
AAGGGGCTCAAAGTCTTTGGAGAGAACTGTTCAAGGATTAGGGAGAGGCTAATGCATGAT
GATCCCAAGAATGGTTATCACTATCAGAGCAAGATGAATCATTCAGACGCTGACCTTTTC
TTCATTGACAAGCAGAGTCACCAGGAGGGTATATACACAAAAGGTGGGGAGGATGAAGAA
GCCGTGGAGATGGAGACAGCTGATAACGCTTTCATGGCTGCTGCTCAGTCGATGAAGGTG
ACGGCGAATGGCATGAGGAAAAGGAAGGACTGTGGAAATGAAGACGCTTCAGTTGTGAAG
TTTGTGAAGTACAAGGCTGAAGACAGCTCGGTTAAGGATCACTTCTCGTCTGCTGCTACC
AATGGCGGCATGAGCAGTGGTAGCGAGGTGGAGAACCCACAGTCAGATGATGAGATGGAA
GAAACAGCTTGATATGGGTAGAAGGCGATGGATTCACTCACTAATGCTTACTTGGGGAGA
GACGTTTTGGGACAAGTGCCTTTCTGGAGTCTGCAAGACTGTTTGCTGTTTTGGTTTCCG
CCTCTTAATGATGTCATGAAGTAGTAGTATCTGGTGTGGTTCCTGCTCGATGACGATGAG
TTGAAGCGGGTTCCTGCGGTCCGACTCCAGCAGGCTTACGGATATAGTAGTAACTGGTAG
CTAACCTAACTTGGCGCGTGATGCCATGAGCTATATCGTCATGTTCCTTGTTATGTGCAA
TTAGAGACTTTCAACATGTAGATTTGCTTCCAAGACTTCTATCATAGAAGAGTACCTTTG
CTGTTATCCCACGGTACCATCTTGAATTAATGAATCTCGGCTACCTTTTAGTTCGAAATT
ACTCCTACTGTGGATGTTGGATATTGTGCCTGGCGTTTATTTGTCAGCAAAAATCCAAGA
GTACTTTTATTTTTGTGGTGGTCTGAGATGTACTTTTTGGTCGCCCAACGACATATCTTG
GCATGCTGGCTTTTTTTATTTACGTGCTGTAATTTTATTTTGTATCTATATACTCGGTGT
TATTTCTGGTCTCCTGTTGCTTTTGGTTCAACACGGGCAGTTTCTTTGCTCCCTGAAAAA
CAAAACAATACTTTGCTAGTTTGCCTGCAGGCGTCTTCGTGTTTTTTCCCCTTTGAGTTT
TAATTTTGCTAACCACATATCCCATGCGGTGGCATCTTCGTGGTCATTGCCCACTCTACT
CTTACGTTCTCGCAGGCCAAATTCATGTCTTCCCTCGCTCTTTTTCACGGCCCATTCTCC
TACCACCGGGATCCTCCCTCGTCGCCGACTGCCACCTCTCCACGGCGGACGCGACTCGCG
GCGCACTCTTCTCCTTCCCACCCCAACTCTCTCCTCCCTGACGCGCAAGCCGATGAGCTC
CGGTCGCACGCAGCGGCGCTGCAGGGCTGCGCCGTCCGCCGAGCGCTCCGCTGCGGACAG
GAGCTCCACGCGCGGCTGCTCCGCTCCGCGCGGCAGCCGGACACGTTTCTCCTCGACTCG
CTCCTCAACATGTACTGCAAGTGCGGCCGCCTGGAGGACGCACGAAGGGTGTTCGACGGA
ATGCCACACAGGGACGTCGTCGCCTGGACCGCCCTCTTATCCGCCCACACCGCCGCGGGA
GATGCCGAGGAGGCTCTGTACCTGTTTTGTCAGATGAACCAACAGGGCCTTGCGCCTAAC
GTGTTCGCGCTCTCTTCGGTGCTCAAGGCCTGCTCGGTGATGAGCTCACGCTCCGAGTTC
ACGCGTCAGGTGCATGCTCAGGTGGTTAAGTTGAAAGGTCTGGATGATCCCTACGTTGGC
TCGTCCCTTGTTCAAGCTTACACGAGCCGTGGGGAGGTGGACGCTGCTGAGACAGTGTTG
CTCGGCTTGCCCGAACGAAGTGATGTGTCATGGAATGCTCTGCTCACTGAGTATGCTCGG
CAGGGTGACTACAGAAAGGTCATGCATGTTTTCCATAAGTTGTCGGAATTTGGTGATGAG
ATAAGCAAGTATACTTTGCCTGCTCTTCTCAAGTGTTGTGTGGAACTCGGTCTTGCGAAA
TCTGGCCAGGCTCTTCATGCTTTGGTGGTCAAGAGAGGGCTGGAAACCGATGACGTCCTC
AACAATTGCCTTGTTGAGATGTACTCGAGATGTCTGTCTGCTCAAGAGGCCTACCAAGTC
TTTGTCAGGATAGATGAACCTGATGTGGTGCATTGCAGTGCCATGATCTCTTCTTTCGGT
CGACATGGTATGGCTGGGGAAGCATTTGATCTTTTGGTAAAGATGTCAGACACGGGAGTC
AAACCAAACCAATATACATTTGTGGGTATTGCTGGTGTTGCATCAAAGACTGGTGATGCA
AACCTTTGTCGCTGCGTTCATGCTTATGTTGTGAAAAGTGGACTGGCTATGCCAAAGTTA
GTGGCTGATGCCATTCTAAATATGTATGTGAAAGTTGGTGCTGTTCAAGACGCAACAGTC
GCTTTCCATCTTATGCATGAGCCTGACACATTTTCGTGGAACACATTTCTCTCTGGATTT
TATAGTGGAAGCAGCTGTGAGCAGGGTTTGACAATTTTCAAGCAGATGAAGTGCGAGGAC
TTTCCAGCCAACAAATATACTTACGTAGGTGTTTTGAGATGCTGCACTAGCTTGATGAAC
CTCATGTATGGCATTCAGGTTCATGCATGTATTCTGAAAAGTGGGTTGCAAAGCGATAAT
GATGTTTCAAGAATGCTACTTGACATGTATGCACAATCTGGCTCCTTTACAAGTGCGTGC
CTGGTATTTGATCGTCTTGAAGAAAGAGATGCTTTCTCGTGGACAGTGATTATGTCGGGA
TATGCTAAAACGGATGATGCTGAGAAGGTGATGGAATGTTTCCGTTCAATGTTGCAAGAA
AACAAAAGGCCTAATGATGCCACACTAGCAGTTTCATTGACTGTTTCCTCTGATATGGCA
TCCTTAGGCAGTGGGCTCCAGCTTCATTCATGGGCCATCAAGTCTGGCTGGAGGAACAGC
TCTGTTGTTTCTGGTGCTGTAATTGACATGTATGTGAAGTGCGGTAACATAACGGATGCT
GAGATGCTATTCTATGAGTCAGAAAAATGTGATCAAGTTGCATGGAATACACTCATCTGT
GGTTACTCTCAACACGGTCATGGGTACAAGGCACTGGACACTTTCAGACGGATGGTAGAT
GATGGGAAAAGGCCTGATGATATCACATTTGTCGGTGTCCTCTCAGCGTGTAGCCATGCA
GGATTACTTGACGAGGGAAGGAAGTACTTTCAATTGTTGAGTAGTGTCTATGGAATTACT
CCTACGATGGAGCACTATGCTTGCATGATTGATATTCTGTCCAAGGCTGGAAGGCTAGCT
GAGGCTGAATCTCTTATCAGTCAGATGCCATTAATCCCGGATTCATCCATATGGAGGACG
ATTTTGGGAGGTTGCAGGATACATGGAAATGTCGAGATTGCTGAGAGAGCTGCAGAAAGA
TTGTTTGAGTTAGAGCCTGAGGATGTTTCTTCTTCTATATTGTTATCAAATATTTATGCA
GATTTAGGAAGGTGGAGTGATGTTACTAGACTTAGGAATATGCTACTGGATCATGGAGTA
AAAAAGGAACCAGGGTGTAGCTGGATTGAAGTCAATGGCCAGGTTCAGGTATTCCTATCG
CAAGATGGATGTCCAAAATATTAATAATTTTTTGCGACGTGCCGCAATCTGAAATGCCAC
CATGGACGGTGCCCATACATAAACTATGATGAGACCAGGAGCTGGTTTGAAGTAGATATG
GCTAGTTCTGTAGGCTGATACAAAGTGCCAAGGTAAGTCCTGTTTATAAATAAGATCGCT
GAAAATGCCACACCTGCATTAGCAGATCACTACCACTTGTTACACTGTTGACTGTTTTAT
CTCATTTATACCGAGCTGACTGAAACATGCTGTTGGGTCCCTGAACTTGCCTGAAGAGTT
ACATAAGAGACACAATGTGCAGAAAATCCACCGACATACATAATCGGTGCAATGCAATTG
TTATTACATCACGAATTAGGATGAATTCTGACCGAGGACAGTTCCTTAGCCGAGGCATGT
GGAAATAGTCACGCAATATTGCCTGTACCGTGAGCTAAGATATGGTTACAAATCAATTTG
GGACAGGGAGAGTCTGATGGTGACCTAGTTCCGTTGATACTGGATTGCTCATCTCGCATT
TGTAGTCCAATTGGGACGCCTGTGCATGCAAGGTGATTAGCTTGTTCACCAACTTAAGAA
GGATCCTTCCGAAATCCTCGTCACTACACCATGGATGAACCTCAGCTTTGATAAGCTGGG
GATCGCTGCTGATGAGATTCCAGAGGGGGTAATTCTCCTTTGGCATGACATAGTCCCCTT
CCCTTAGCTTAAGGGAGGGGCAGTAATCCCCCTTCCCGTCACCGATGTAGATGAAGTGCT
TGTTCTTGGCACTGTCTGCCTCTTGAATCCTCTGGATTATCTTGCCCTGCACATGGCAAG
TAAAATTTTAGTTCATGGGGTTTTCATTGTGCACACCACTTTTCATGAGTAATGCACCGA
GGATTCAGCACAAACAATACTATTTCATCAATAGTTTGACAACACATCATGCCTAATACA
GTAATAAGATTCTAAATGCAGAAGACATCATTATGTATAGTGAGTGACATAAATTGTTTC
TTTTGTCTCCATTACCCACGTGCATCGAGTGAATCTGTGAATTAACACGTGAACTGATCT
GCCATCCTACTGTCCATACCTTGCACATGTTGTCAGGGCACATGCTGCAGCCATGGGGCG
AGCTGGTGGGATCATGGAACGGCGAGATCCTGAGCCTCCCTTGGGCGTCCACGCGCGCGG
GGTTGGTGTTGATCTCAGAGAAGCAGCCGAGGACACCGTGATGCTCCAGGACGGTCGCGA
TGAAGAAGGAGTTGGCGTCGCTCACCACCTTCAAATCACACCTGCAACGTACACCTACCA
CCATCAAGATCCAACCACCGGCCGCGTGAGAGATCAAGAACACATCGGCAAATCGGCATC
CGTCCATGTCCATACCCTAATGCCGACGCCGTCCGGATGGCGGAGAGGACGTGCGCGTCG
AGCGGCGCGCTCCTGAGGCACTCGCGGATGTCGTCGGCCGACCTCCCCTGCGCGTGGAGC
TCCCCCATCATCCTGTCCTGGAGGTCGACATCAAGGCCTCAGCCGGGAGAAGCGGCATGT
CTAGGCGGGTGTGTGGGCGGTGTCGTGTTCGTACCATGAGGGAGTTCCAGCGCATGGTGG
GGCGCAGGCGTTTGAAGGCGTCGGCGGCCCCGAGCTTGGTGATGACCCAGTCGTCGCTGT
CCCACTGGATGATGGTCTTGTCGAAGTCGAACAGCACCACCACGGCGGCGGCGGCGGGAG
CGGCCATCTTCGGCAAGGGAAGAGACGGCAGATGGGACGGTGGTTCCGGTCTCCGACGTT
TGCAATACGAGACTCCGGCGTGGCTTTTGTTTCTTCGTTTGTCCACACCGCCACATGTGA
CCTTTCTCTTTGTGAAGAATCGATTGTCAAGAAACGAGAGAATCGAACAAAATGAATCAA
CTCTTATCTTATTCCATTGATGTTCAACATATTTATACAAGAAGAAAGGACGCGATGAAG
AGATGCGTCCGTTCGTGAAGGGATGCGTGGTATGTCGGTTGCCATTCTACTAACCGACAT
AGATTATTACATGGGAGGATTATCCCTTTTATTTAATCTACTAATTAAATCCTAACACTC
CCCCTAATCCTTCCTTGTATTTGCGATCGAACATCTTTGGAATCATCTCTTCTTCAAAAA
CCCTGTGGGAAAAAATGCAAGGAGCAGTGTGTATGATATGTTGCTAAAACTCCTTTAAAC
CCATTAGAAAATGATAAGGAGAAAATGATGCAACATATAGTGATTATTGTCTCTTGATAA
CT
