| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
 |
 |
No map location |
Predicted Genes from contig_37820
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_52819 |
2 |
232 bp |
AK367738 |
Not available |
Available |
None |
CDS Structure of MLOC_52819
Contig Sequence (7883 bp)
>contig_37820 7883 assembly3_WGSMorex_rbca.fasta
AGGGGTCACATGGAGCTAAGCTCCTTGTGCTTCAGTTTTTACTGCTACTCTACTTGGGAC
TGCAGGCCTCGATCTGCTACTCCAACTGCATCACAACAAGAATCGCAGATCAATCATCAA
GAAAATACCAATATGTAGATTATGGTTTACATAGTGAGAAGCTGAATGCCAAAGGCCAAC
ATAGGACCGTAAGGAGCTACCTGCATCATGGTCTGGAACTTGCTGCGCACATCACATAAC
TCACTCCTAACAAGGGCCAACGCCATGAGGCACCTGAAATAATAAGAACATAACACACCG
TCAAATTCTGGAAAGGCTAAGCGAACTGAGCTAAAATGATTCAGAAATTGTAACCCCCTG
TCTGGGAACAAAATAAATGAATAACTAAAACCATCTCAGAATTCAGTCATGCTATAAGCA
GAAGTCCATAACCAACGAGTTATAGGAGGCGAATTCAGACAATGAACCAAGTTCTACCAA
TCACATGATTGCAGACAAAGTGAACAAGCATGTCAGTTCTTAAGAGTATTTCTTGGTATG
AGCTAAACATAGTGTCATACAAGACAAAGTAAGCTGGCAGGTTTACATGAAGAATTTGAA
CAATACAGACAGTGGAGAATAATTACTCTGCAGCATATAGTAAGGTACTGAGTACTCACC
CTTGTTTGCTTTTTGCCTCATAGAACTGACGGAAGTGCATGCAGGCGAGCTTCACTTTCT
GAGCGCCAACACTGAAAAATGATAAACAAGCGTCGATCAGGAAATTAGAAATTTCTAAAA
TCATTTAACTCTGAGCATGTTGATACTTGATACACATAAGTAATGCCAAAATATTATGAG
CCTCGGAAGCAAGTCAACAAATAAATGATCACAAAACGATGAAGTTTTCGATCCCAGGCC
ATAAACCATTGGCAAGAAAACTGATAGTTTCGTTGCACAAGACACTAGTAAACTTGGGTC
TTCTACATATGGATATAGGGCGGGGCAAACGACGTGAACCGTGTGCCCATGGCATCGACA
CCCAGCACCAACAAATCCAAATAGTAACAACATTGGTGCCATGGACAGATCAGAAAAAAC
ATTCATCGGAGTNATGTAGAATAGCAGATCATTATATACCAGAAATTTTGCAAAACTGGA
AAACGACAGTTATTCCCTTGCCAAGCTACCTAGACCACGCCTTTGTATAAAGTGTCCCTT
CCATTAAAGATTATGATTTTCGTTCGCAAGCTTCTGTATGAGCCCCCCCCCCCCAAAAAA
AAAAAACTCGGGAATGGAGGTGGTCAAGCAACATGGGACAAGCGATGGGCTTTGCCCTCT
TTGTGTTCAAGCAACATTTTCTTTGTCCGCTCCGCTGTGTGCTTCCTTTGGAGGTTTGTC
CATGAGGCTTTGTGCCTAAGTGAGAAGCGTCTGACCTGTCTGAGTTTCTAGAAACTTAGG
CAACCCTGCCAGTAGAAGGAAGAGCCTCTTCTAGCTAGTGTTTGCAACGATAACTTGGAC
CCTTTGGACGACATGTAAGAAGATGGTTATCGAGCGAGTCTTCTTGCGACGGGCTACTCA
CTCTGTTTTTCAAATTTCCGGGCTTTCGGCAGAACCGAGACCCACTCTCTAGGTTGCATT
AGGGACTCACTAATTACGTGAGGGCACCGCCTTACTTCACCATGTTCGGTTTTTTGGCCA
CATGGTGGTTTCTTTTTCCTTTTCATTTAGGGCATGTTTGTGTTGTTGACCCAGGAGACT
TATGTCTATTTTCCGTGCACTTGAATTTGTTGTATGGACGTGGGTAGTTTGGTTTATCGT
GCTCAAAGAACTGGACATAAGGATTCCCATGAGCTTTAAGTGGGGCGCATTTAAAGGCCA
TGTGAGCGTCTCCAAGAAAGGAAACAACACAAGTGAGTCTCCCCGCTACTATCATCGACA
AACCAAGTACGGATTTCACCCTTCTCTAATTCTGAGCAATCTCATGGTCGTTTGATCGGG
AGTCAAAGATTAGGAAGTAAAGTAGTTGGTCGGAACCGCCACCTAGGAGGGGTGGGCTCT
ACACTTGCGATCGGGTACAGGCTTTGGGACTGTTACAATGTGAGACGTGGAGGTGGGCAC
GGTCGGGGAGGTGGCGGGGCAGATAGAGTCGGCGCATAGAAAGCAACAACGATCGATGAT
GCCAACGACCTAGGAACTCAAGGGGACGTAGGGGGCAGAGCTACTAAGATACCGACAACC
CGAGGAAGCTTGAAAAGATGTAGCTACTTGATCGTCAAGGACGAAACCACACCGAGAGAG
GAGGCCCACAAAACCGTGGACACTGGACGGTGTAGGTTTAGGGTCGTCCGGGTGGAAGCA
ACGTCGGCAAAGGGATCATTGCAAGGCTTCACGCACCCGCCACACCATCGTTAAGGACGA
AGGCAGTCGTCGCTAGGAAAACGGTTGTCAAAGACGAAGAGGCTCGCCTACAAGGAGGCA
GGCCCACAAGCATCAACAAGCATGACTCTAGCCTGGCCACAACGGCTACATCCACAACCC
CGGCTAGGAGCATAACACCAACAAGATCGGGTTGTGTCATTGGGGAGGAAACTACAAGGG
AGCAGCAGCCGCAAAACATATCGACTGTCAAGGGGAGAAGCGGTTAGAGAGGACCTCGAG
AGGTCGCACAAAGAGTGGATCTAGGAGAGGGTGTAGCATCGCGGGACAAACATGTAACGT
ACACACACATCATACCCATATGAACACCTTTAAAAAACTGAGTTATCATATCATCTTAAG
ATTTATAAACACCGTAGTTGACTCGTCATCAACGAAAAATCTTCTTCCAGTAAATGGGCA
TCGCCCGAAATCTTAAAATAATTTCAGAAATAATGCAAACACACCAACACAACCTTAATT
AGGCCGTCAATCATATTAGCATATGGTACCTGCAGTGCTAGCCTAGCCTAGGCGCGCGTC
CACTATGAACGATCAAACCATGCATGTGTGGTGTTTGTGACCAGCAGATTGTTCTGGTTA
CTGAATAAGTGTACTTGATCTTACGAACAGAATCAGATACCAAAGCGATGACACTCTAGC
TAGCTAGCTAGCAGTTATACCAAATGCCTTCCAGCCGTCCTATACCTACCGCCCTCTTTT
GCACAACCGTGTCTCGTTCTACACCGCTCCCTTGCCATGCCTGCCATACCTACCGTCTTT
TGCGAGTTGCTGTTTCTTTGCCCCTTAACTCATCCGAGAATGGGGGGATCACATCACAGT
TTGAGCTCATAGTCATAGGCAAGATGACCCGTGTTCAGGTATCGAACGCTACTACTAGTA
CTAACTCGGTTAATCAATAGCCTCCGTGCACCGGTGTCGGTGCGAGACACGCATGGTCAC
GCTCACACACCGACGGCCCTCAAAACGTACCACCAACACTTGCATTTGCACGAAATCGAG
CTGTCGGTCGCCGCAAAATGCACCCAGATACTGCGCTTGATAACCTGATGATTGAGTTTT
TAGCATCCCTTCCATTTTGACCGCGCATGCATATGGGTTCCTGAACCCTGCACGAGTCAC
AGAGCGGATCCAGTTGACCTTCTGACTATGGAAAGGTTTGTTTGCTTTGTCCTCTGGTAA
ACTTGGCTTGGAGCAAACACTATGGCAGGTGGCGCAGCTGTTGGCCATGAGTGGGCATGC
AGTGGCCATAGCTGCACGGCACTGCAGCGCACGCGCAGCGCTGCGAGTAGAACAGTCGTC
GTGGGTCGCCTTTGGCGGACGGGCTCACATGGCCTGCGCCGTTGCGTGGCACCGAAAGGC
GCGCGCAGTTTTTTCTGTTGGGAAACTAAAAAGGACCTGTTTGCCAGAAAAGAAAATCTT
GACATGCTGGGACGAGCAAGTGGGGCTTCTGGAAACTAAAGTTTCTCCCTCAAGCTTTCC
TTTCCTCGCTCGCCACTCACCGGGATGGTGTCACGATTCACGTCTCGTAGCTGCACATGC
TGCCCATCATCTAGCTAGTCGTCCACATCGATCTATCCTCCAAATTGGTGCAATTGAGCA
CAATGGACGGATTCGCCCAAAAAGTCGATGTTAAGGTAGGACCAGGCTCTGGCCCTCCCA
GAGGAACTGTTCAATTAACCCGCGAAAAGAAGAAGACAAAACACTGTTCAATTTTTTAAA
GATATATATAGTTCATGTCCATATAAACATATGCACAATTATCCTTATAAATCGTGCTCA
CACATATTTTTTTTGCGGGGAGTGTTCACACATATTTTATTCTTATGAATACCTACTACA
GGCTGATTGTTGATTGTTGAAGAAAACGGTATGCATTATAAACTAAAAATGAAGCAAAAC
TTGAATTTTTGTGCATATGAATCAGGATATGATGCTCCTTTCAAGCCATGTAGTATCATT
GCATACACCACAAGGAAAAAGAAAAAAAACATGTGCACTCATAAAACAAATTCAAATATC
CATCCACTATATGATATAGTGGTAGATAGAGGGGAGACGAAACAACATTGTCACCCACGG
ACATAGGAAGTATTAATCTGTGCCTAACAAAGTGCTACACCTCTTCATAAATATTCAAAA
AGTAGTGTAAAGAAAAGCTAACCTTGATTGATCAATGTGAGCTTGCACGTGTATTTGTCG
AGTTCCTCCTCTTGCATACCTAGGCCTGCAAATTAGCCCAAGTGAGTTTGGTTTTCTTCT
ACACTGAAAAGCACCAAGGACAATAATGACTTTGGCCATGAAGATGAATAAAGGAAGATA
AAATGTCACTAAAACTGAAAAAAGGGTAACATGTTGTCCTGGTATGCATTGCGCTGAGGA
TTCCCATTCTTTATAAATATTTTTCTAGCACGCTAGGAGTTATGCACAATCCATATCATG
TTAGATAGAAGCACGTGAATTGATTGAAAATTCAGATTTTTTTAACCAAACCCGTAGAAC
AATCGTTCTACGGTAGAATAAAAGGTACATAAAACAAGTCTGCCAACTAAATACAAAAGT
TTATCCTACTTCTGTTTTTTTGAAACCCTATGATAACATGATTCAAGGGAGGTTCTGGTC
AATCCAGCTTGAAAGTTGTTCCTCGAATGTTCCTTTAATTCCGTGTCTAATCAATGATAA
ATCACACCTCAGAGAGAATGGCCAAGACCCAAGTGAGGCAACCTGAGCTTTGAAAATGAT
TCTGTTCGTTTGCATCCAAGTATTCCAACAACCCATGATAATAATTTCCATGGCAATGTT
GTGGGGGAGAGCTTGGGCAGCGAGCAAAATTTCATCGTAGATCGAGATGCCTCAATTTTT
GTGCCCTAGAATTGAATTCCAGTATGCCACCACAAAGTCAGAGTCCCAAAACAGGTGCAT
TGTTCTTTCTGTAGAATTAGAATGACAGAGAACACAACTATATAAGGGCACATAGAATAT
TTTCCTCTCAAGTGGATTCCTCGTATTAACTCTATCATGCAGCAACAACCAGAAGAAAAT
TTTATATCTAAGCATAGTAGCACTTCTCTAAATTTTCTTGAAGATGGGCGGAGCTAGCTC
TCGACCAGATAATTCTTTGTACATCTTGATTCAAGAGATGTAAGAACCCCAAGGATATGT
CCATTTATCAAAGTTGTGGGAGAGGTTGGTTTGTTGAACAATGCCTTGCAACTCTTGATA
ATGCTGGTGAGCCTGGACAGATAGGGGGTATGGAAATGTTGCACCATATCTGTATTCTGA
TAGAAAGCCAAGACCAATATGTTGTCATTGCTTGCAAAAGAGATAAGTTCTGGACATTTC
TCCAATAGAGTACCATGACCCAAGTTATCCCACCAAAATGAGGTTGTATTTCCCTGGCCA
ATCACAGTAGAAGCAATCCTCTTAAGTTGTGGCAAGAGTTTAAGAATACTTTTCCACCAT
AAAGAGCCCACTAATTTGTTCGAGGGGTAATAAGAGTCCTAAATAAGTGTCGCCCACGAC
AGATTCTCATGATTTAAAAACTTCTGCAGATGTTTCATGAGCAGGCACTTGTTATGGATT
GCTATATTGAGGACCCCAATCCTCCTTGATCTTTAGGTTTACAAACTTTGTCCCAGGAGA
TGAGAGTAGTACATCTATCCTCCATGCCATATTTTCTCCAGAAGCAATGCCTTAGATACT
TCTTGATTTGCTCAATGATTCCAACAGGTAGTTCAAGAGATCACATGAAGAAAGTTGGCA
CACTGATAAAGGCAAATTTGATGAGAGTAAGCTTATCCCCATAAGAGAGCAGTGTTGAGC
AACCAGAAAGTATCCTATCAATTCTTTTGAGTAGTGGAGTGAAGTCTTCCAGTTTTGATT
TGGAGAGGGTTAAAGGAAGGTCAAGATATGTGAATAGGAAACTTCCTATAGTGCATCCTA
GTCTGAGGTGTCAGAACTAGTGTTAATTGGAACCATTGCAGATTTTTGAAAGTTCACTCT
TGATCCAATAAATATAGTGAAGTGCATGAGCAGATTCTTCAATTGTTCCACTTGAGCCTT
AGAGGTATGTAATATGAAAATAGTATAATCAACATATTGGATCACTGGGAAATATGGGCA
TGGATGATTTGGTAAAGGCTTATTGATTAGATTAATGTTCATGGCTGCATTCAAAATGAT
CGAAGAATATCTGCTGTCAGGACAAATAATAAAGGGGATATAGGGTCTCCTTGTTTAACA
CCTCTTTTGCATGGGAATTGTTTCTCTCGCACTCCATTAAATAGGACTCGGGAAAATCCC
AAGGAAAAGATCATATCCACCCACATAAGCAATCTATTACCAAATACTTTTGCAAGTAAA
ATCTTCTTGATTGATTGGTGTTCAATGAGATCAAAAGCCTTCTCAAAATCCAGCTTGAGA
ACAATTGTTTCCTGACCATAAGATTTGCATTGATGAATGTATTCATATTTCCAGGCTAAA
CAATCTTGACTTGATCTTGATTTGAGAAAGCTATACTGATTTGGGTGGACCAACTTCAGA
ATAACTCTTTGGAGTCTATTGGCAAACAATTTGGTAATGATTTTAATAGAGAAATTGGGC
AGGGAGATAGGTCTAAAATCATTAGGAGTAGAGGGACCATCCTTCTTGGGGATTAGAGTA
ATAAAGAAGGATTTAATACTTTGCAAGTTGAATATGCCATGGCAGAAGTCATCAATGAGA
TCATACAAATCTTGAGCAATAATATCCTAGCAGGCTTTTACAAAATTGGTATTAAAACCA
TCTAGTCTGGGAGCCTTTTCAGAGGGTAATTCCTGAACGACTTTATCAATTTCTTCCTTT
GAGAATGGCACTTCTAACTCATGTAAATCAGCGTTGGATCCCAGGAACTCCTACAAGTCT
AGAGGATTAAAGAGTGGAATAGAACTGCATAGTCTTTTCTTGAAAGCATTGTAAAGAATG
TTTGGTTTGGTACTGTGATCTCTTAAAGAGTTTCCCAATTCATCTTGAAGGTAATCAATA
GAATTAATTCTATATTTGATAGTGGCCTTGGATTGGAAGTATTTGGAATTAGCCTCCCCA
AATTAACCCATGTGATTGTTGCTCTCTACTTACTACTAGATATTCTGCCATTCCAACAGA
TTTAGAACATGCTTCTTGAGAAAATTTCAGCCATTGTACTCAATATCAGAAAGGGGCATC
AAATCCTCTATGGTGTCAAGATGCAGAGTCACCGCATTTGTGGCCTTGATTGAGCCGCTT
AACTGTGATATATTTTTAGACCATACTTTGTGACATGATCCTCTTAGAACTATCCTTAAT
TTGCAACTTTTGATCCCAACTGTGTTAAATAATGTAAGTGCATCTAGTGCCCCTTAGTGA
TTTTTGTGGATTGAAGACTTATAGGTTAANAGACTGATATGTTTGTAAGTGTACACTCAC
TCTATAAGTCGCTGAGGAGTTTG
