morexGenes - Barley RNA-seq Database

Contig contig_37796
Source Contig contig_37796
Contig Data
|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|
morexGenes
Links
Map Locations of contig_37796 (7599 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
	No map location	No map location
Predicted Genes from contig_37796

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_52788	3	2256 bp	MLOC_52788.1	Available	Available	LOC_Os11g14220.1, FRAME:+2, EVALUE:0.0, 13111.m01455 protein tubulin/FtsZ domain containing protein, putative, expressed
CDS Structure of MLOC_52788

Contig Sequence (7599 bp)

>contig_37796 7599 assembly3_WGSMorex_rbca.fasta
ACTTAAAAGATGCTTGGTATAGAATGGCAAGTCCAACTTATGGTCTATCAGTAGGAGGTT
GCAACTATGCAACAGAGGAGGCATCAAGATCCGTTTCCAGTGTGTGAGAGGACCGCTTGA
ACCATGAAATCTTTTTTGGCAAACAATGTCGGGTTTTAACCTAGGGCCGACTTAGGAGGT
GCACCAATTACAGGAGCAACGCTGTTGGTTAGAGGCTACAACCCACAAGAGGGTTTGGGT
TATAGTCCCCCCAAAGCGATGTGACACCATCATCAACAGCAGGACAGCGAGCCAGCTCGA
GGTCCATAGCAAGTCCAACAGCAGAACCAGATGGAGCAACCGACTTGTTTTCACACACGA
GCGGGCCACTACTCCAACTCGATGGATAACATACTCGCAGCAACTCATAATTTGTCTATG
ATCCCAATCAAGAAAATAGCCCGTTGAGATAGAGGCATGAAAGGCAATCCAGTTGTTGTA
GACAACAATCACACAACATGCGAACTCCTCGCACAGTCCCAACATGCTGCCTCGATGCCT
TACAACATCCACAAGGTCTCAAGTCGGCATGGGGAGTCCCCTATTCCTACATGATCAAGC
AATGCTCGTCGTTAGAGGGAGTGTCAAGTGCTTCATGAGCAGCCAAGGCCGACAGTCTCA
AAAGCACAAGCCAGTGTTGACAATGCATGTGCAACCCGTGCAGCTCAGGCCGGCAACTTG
ACCCCTAAGCATGTTCACGAGAGGGAGGAAATATACCAATCCCACCCGCCACTAATGCCC
GAGTTGTTGGAACAAGATTCGTGCGAAGGACTATCGATACTCAGTGTTTGGTAGTTGCTC
TGAGGAACGAGCGTTTGCCTTTCGATTTCAAAGGACCTCAATAGGTTCCTAATTATACGA
CATAAATGGAACCCGCTGACTGGATTGAGAGTTACGAGCTAGCCATGGATATGCTCGAGG
TTAGCGATGGAGTTTGCGCAAGGTACATTACTATGATGTTGGAAGGTCTGGCTCGGACAT
GGTTGAAAAATCCACCAGCAAATTCTATCAATACATGGCAGCAACTGAAGGAGCGTTTCA
TTAAGAATTTTCAGGGCACTTGTAAGAGTTCGAAAACAATAGTTGGCTTAGAGTATTGTG
TCTAGAAGAATGGTGATATCGATGAGCCGGTGCTCGTGGTTGCTAGCGCTGACGGGGCAA
TTATTGGGACGAAGCGACCATCAATGAGCCCGAAGGTGAGAAAAGTGTGAATGGAGTTTG
GTTTCTAAGAGAAGAGAGGGGTGTGAGTTATATCGATTTCCCTCATAGGCTTCCCAAAGC
GTGCACGAAGAGACACGCGTGGCTCACAAAAACAATCTATTTGACCTTTTCATCTTAGCT
AAGCCTATAATGGCTTTGATATTTGTGTTTGTCATAAATTTGATTTATGCGAGTCAGCCA
AACAATACAAAACTACTCCTCACATGATGTGAACTTCCAAACAAATGTCGTGATGTTTTT
TTTAACAAAGTACGAACACAAGCGCTCATATACACATGTGTCATACGAAGGCACATACGT
ACATCCTACCTCTGAAAGACTGAACCGACATATCGTCTTGAGATTTACGAAATCAACGTA
GATATCTCATCGTCAACAAAAATGCCTCCTCCAACTCAAAGTGTATCACCGTAAATCCTA
AAAATAAATATAAAAATAATGTAAACATCACGACTTAAACTCCGATAGGTTGAAAATATT
ACGTCCTCCGTTCCAAAATAAGTGTCGCAAAATTTATACTAAGTTAATACAAATTTTATA
CTAGATCAACGACATTTATTTTGAAACGGAGGGAGTACTATTCTTGTAACTATCCAATGA
CAGATTGGTTCCTCGGATGCCCTGATTGTTGTGAATTTGAAGAGTGGTGGTGTGGTGTGG
ATCTGTTTCGTACCCCAGCGAAGAAGTGCGTGCTGTCAAGAAAAAAAAAAAAGAGAAACA
GTAAACAAAAACCAAGTGGGTGTCCACCGCTGGATCATTCATGGGCGGCCCGTGCCCGTC
AATCGTCCGTCGGCCGCGGCACCCGAGCAGATATTTTCCCAAGGGGCAGCGCCGTCTTTT
CCTCGTGACCCGGCCGCGGCGCACATTTACGAATTTCAAATTTTGAATCCCGTCGGCGAC
GGGGCCCAACGTTCCCTTGCCGTCCCGCAGAATCCATCCTCCCCGACCCCACCCCAACCC
CCACCCTCCGCTCCACCCGATCCCACCCTACTGACAGGACGGCCCCGCCCCCGCCCCCAA
CACACCGGGCCCACACGTCGGCGAGCCGTCGCCGCGGCCCACCCTCGGACGCGCACCAAC
CAGAGGCCGTCCAGGCTGGCGGCGTGGGCCACCGCCGCGGCCCGCTCGCCTAGCGCCAGC
GGAACGGCCGTTAGGTTAACCGGGGGCCGGCTATAAAGAGGGCGAGGCGGCCCAGCGGAG
GAGCCACTACACATCCGGCGTCTTCACAAACGCCGTCTCGCTCTCGCTCCGTCTCCCTCC
TCCTCCCCCCCCGCTCCGCCGCCAGATCCCGTCGAGCCAAGCCCAGCCGCGTCGAAGATG
AGGGAGTGCATCTCGATCCACATCGGGCAGGCCGGCATCCAGGTCGGCAACGCGTGCTGG
GAACTTTACTGCCTCGAGCACGGCATCCAGGTTCGCCCCCGCATCTCATCTCATCTCCTC
TCTCGCGCGTCCCAATTTCGAAAATCGTGTGTGTTAGCTACTCGATTGGTTTTAGAAGGT
TTCCGGCAGCGGGGGCTTGTGGATCTGGTTTGCGATTCGGGTTGTGCAGTGAAATGTTTT
GCGGTTCAGTCGTCAGATCCTCTCTTGTTTGGGGCATTTAGGCTTTTGATTTGTGCGCGA
TTCGAACTGTGATGGGATTACCGGATTCGCGTTCCGTTTAGGACTAGTTGTATTCACGCG
ATGTGGCAATTCGTGTTCGATCTATGTGGCAACTAGTATTCGATCTGTTCTGTGGATTGT
TCTTAGTGACTCTTCTGAATCGTCAGGAACACCAACTGTTTGTAGTTCCTAATTTAAGCT
TCCGTTCTGTGATGTTTAGTCATTTAGTCTTGCAGTTTGGATCTGATATGCAATTACAAT
TTAGGGGTCGAGTGTTTCAGGAGACACGAATTTACTTTTGTACTAGTTTAGTTCCGGCTT
TGTTTGCCAAATCTCAGATCTAGTCACACCATTGCCATGGATTACTCAAGTTACATGTTC
TGTTTGGATGTGTTATGCTACTATAACCTGCGTCTGACCAAACACCTTGATATTCCCTGC
TGCAGCCTGATGGCCAGACGTCCGGTGACAAGACCATCGGAGGTGGTGATGACGCCTTCA
ACACCTTCTTCAGCGAGACTGGAGCCGGCAAGTACGTGCCCCGTGCAGTCTTCGTCGATC
TCGAGCCCACCGTGATTGACGAGGTCCGCACCAGCGCCTACCGCCAGCTCTTCCACCCCG
AGCAGCTCATCAGCGGCAAGGAGGACGCAGCCAACAACTTCGCCCGTGGTCACTACACAA
GTAATTCCCCAAAACCCTTTTTGCTTCATTACAACAATTAGCCTGCTCTCTCAACCATGT
TTGGTTTGCTCATCATGCCTTGTTTGCTGTTGACACCTGCAGTCGGCAAGGAGATTGTGG
ATCTCTGCCTGGACCGCATCCGCAAGCTGGCCGACAATTGCACTGGCCTGCAGGGCTTCC
TTGTCTTCAACGCCGTCGGCGGTGGAACCGGGTCTGGGCTTGGTTCGCTCCTCCTCGAGC
GTCTGTCAGTGGACTATGGAAAGAAGTCCAAGCTTGGGTTCACCGTGTACCCATCTCCTC
AGGTGTCAACCTCTGTGGTTGAGCCCTACAACAGTGTGCTGTCCACCCACTCTCTGCTGG
AGCACACTGATGTCTCAATCCTGCTCGATAACGAGGCCATCTACGACATCTGCAGGCGCT
CCCTGGACATTGAGAGGCCCACCTACACCAACCTGAACCGCCTCGTCTCTCAGGTACTGA
CCACCCGCCATTGCCCAATTCTTTCATCCGGATTGAAGTATTTCTTTGCTGTACCAGTAC
TGTTGTGCAATGTGTGATGTGAGACTGACATGGAACTTGAGCTGTTTGTCTGTGTGTAGG
TTATCTCATCTCTGACCACCTCCCTGAGGTTTGATGGTGCCCTGAACGTGGACGTGACCG
AGTTCCAGACCAACCTTGTGCCGTACCCTAGGATCCACTTCATGCTCTCGTCCTACGCGC
CGGTCATCTCGGCGGAGAAGGCGTACCACGAGCAGCTGTCGGTGTCGGAGATCACCAACA
GCGCGTTCGAGCCGTCGTCCATGATGGCCAAGTGTGACCCTCGCCACGGCAAGTACATGG
CGTGCTGCCTCATGTACCGGGGCGACGTGGTGCCCAAGGACGTGAACGCGGCCGTTGCCA
CCATCAAGACCAAGCGCACCATCCAGTTCGTGGACTGGTGCCCCACGGGGTTCAAGTGCG
GCATCAACTACCAGCCGCCCACTGTGGTGCCCGGCGGCGACCTGGCCAAGGTGCAGAGGG
CCGTCTGCATGATCTCCAACTCCACCAGCGTCGTCGAGGTCTTCTCCCGCATTGACCACA
AGTTCGACCTCATGTACGCCAAGCGCGCCTTCGTCCACTGGTACGTGGGCGAGGGCATGG
AGGAGGGCGAGTTCTCGGAGGCCCGTGAGGACCTGGCCGCCCTGGAGAAGGACTACGAGG
AGGTCGGCGCAGAGGGCGGCGACGACGAGGATGGCGAGGAGGACGACGACTACTGATCTG
CTCGTCCGCTCGACGGAGGATCCGTCTCCTCTGCCGCCTATCTTTAACTACATGTTGCTT
TGCCGTCCTGTTTTGGGGTGAGGTTGTAAGCCATCGGTGCTTTCTATGTCGCTGTTGAAC
TGCATCATTAGTACTTCGTGGAACAAGTATCTCGCTTAATTTGTTCTGTCCTGCTTCGTT
ACAGTGTTATTTCCGTTGCTGTCCTGATTTCCGTCCTCATTCTAGGTTTCCATCCTCTTT
CAATTCCAAGTTCCACGTTGCAAGTTTCGAGCCCGATTAGTGGTTTAGGTCCCTTCCGAA
GCAGCTATAAATAATGTTCAGAAGATTGCTTTCTCCCCAAAGAATCACTCGTAAGATTCG
AAGGTGCAGAAGCCCCATTAGATTCTTCATTCATGGAGCTAAATAATATTGAAGCCGGTC
AAGTTTCAGTTATGAACAAATCGTCTCTGTTTGGAACTTCTTAATCATCAGTGAAGTCTG
CTTTCTTTATGCTGCAACCAAAGGAGGAAGACAGACTCAGCGCGCTGACTGATGCTTCGC
TCTTTCCTTAGAATGGAGCTCTCTCACCAGATATGTCAGTGATTTTGTTCTTCGGTGACA
TATTCTTTAACTATGTAGTTTTGCGTTTGCGCATCCTATAATTTCTTTTTTGATCCTCAC
CTGAATATGTTACTCAAAAAGGTCGCATCCTATGAAATGTAATCCAAATTTCTTTATGTT
TGGTTAGCTTTGGATGCAACCGGAAATGAAGCTACTCAGCTCTGCATTCAGCAGGCTAAG
GATGCTGTCCATACTTGAGGCAGCTTGAGTAATGAGTATGTTGAAATATTCCAAATTCAG
GTGAGTTGTGTTATTTCTTTCTCAGAACGTTTTGCCAGCTTGAGTAGTGAGTATCTTTTT
CCATTTCAAAATACTTTTATGATCTTCATAATCTCATATTCAACTGGTATGTTAAGCTGA
TTTTTCATTCTGTAAATTGAACTGCTGTTGAACCTGCAAATTTAAACTGCAAGCCTATAT
TTTATATAACTATTGCTAATGCAAAAATGCAGGTATGAGACCATTTATGCGATATCGATT
ACCAGGTCAGACTGCGGACCTTCCCTGAAAGAAGGCGCCCTCAGTGGGAGATGGACTGCC
GGGGCTCCAAGAACCTTCTACTTAGAGAGCTTCAAATCATTTGTTTTAGGCCGCTAAAGC
AGGAGCTGACATTCATAAGGGCCATGCTCTAGGGTTGCCGCCTTTGAGAGTCATGTGAGT
CATATGATGCCCTAGGGCCTAGGGTTGCCGCCTTCGAGAATCTTGTTCTAAAGAGCAAGG
CTGAGCAGGAATGGGTGGTCACGCGAATTACAAATGGAGTGATCTTCTTAGGCCAAGTAA
ATTTTGATGATCGAAGGAAGCTGTAGATGGATACCTGGTTCTCATGGCTTGTTTTATTCA
GAGGCAAATTGTTTTCCATTTCTATATGAAGCTGTAGCGACTATAAACATGAACGAAAAC
GCCCTTGCCACCCTCCCCCGCCCGGGCGACATGGGCGGCGGCAACAGATCCATCACCTCG
TGCGGCCCCATCTCCTTTCCTCGCCTTCGTCGTCGGCCGGTGCTGCCCTTTGCCCCTTGC
GGTGGCTGGCGGCGGGGCAGCTTCTCCCCTTCCCTTGGTGCGACTGGTGCGGGGCAGCCG
GCGTGGGCTGGAGGCGTCGGGCTGGTGCGGGGCCCGGTGGCGTGAGGGCGGCAGGCGGGC
GGTTCCGGCGCGACGACGGTAGGGCAACGGCTCGGGGAGAGAACCCCGCTGCCGCACGGG
CTTTGCCTGACGGCGACGAGAGGGGAGGAGTGTGAGAAGAAAAGAAAATATTTCGTTGCC
TCGGGAGTTCACCGAGCGTGGGTGGCTGCCACCATCTGCGAGAATTTGACGATTCCCCTT
AGCCAGCTTTTTAAGGAATATTCTTAGGCATTTGGTTATCCCCAGCCTTCTTCACCATCA
AACCAAATGAGTCGCATCCCTTCTAAAACTGGCTATCCCTGTCCACTGGTTGGTTATTCT
TCAAACCAAACGCCACCTAAGGAGTTCGTCACGGGATCTTGTATTATGGAACGAGTAAAT
AGACTTGTTGGTAACGAGATTAAACTAGGTATNNNNNNNNNNNNNNTCAAATCTCGGGTA
AGTAACATACCATTGGACAAAGGGAACTAGATACGAGATTGATTGAATCCTTGGTATCGT
TGTTCGAACGATGAAGATCTTCATGGAATATGTAGGAACCAATATGTACATCCAGGTCCC
ACAATTGGTTATTAACCGCAAAGGTGTCTCGGTACTGTCTACATGATTCTCGAACCCTCG
AACCCGTAGGAACCCGTAGGGTCCCGTAGGGTCCGCTAGGGTCCGCGCGCTTAACGTTCG
ATAACGCTAGAGTAGTTTTGGTATATTCACGTTGGTGACCGAATGTTCTTGGAGTCTTGG
ATGAGATCCCGGACGTCACGAGGACCCCACGCGAGCGTGATGGCGTGACCCCACGCGGAC
TCGTCCGGAAACCCGATGGTCCGACGAACGCCTCGACCATCGACACACTGTGAACGTTGT
GTGGCGCCGCTCTGGCTCGCTGCCCGAAGCCAGAGTTGGCTATTTAAGCCAGTCGGAATC
CCCCAGCCCTAGCACATCCCCCTCCCTCCACCGCCACTCGAGCCCATCTGCCTCCTCTCT
CCTACTCTCCGGCCTCACTATGGTCCGCCAGAGGATCACCACCTATGCTCAACACACGCC
GGAGCGTCGGATGCAGATCGTGTTGGGGAACGTCGCATG