Contig Data
morexGenes
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Map Locations of contig_37767 (5395 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map location




Predicted Genes from contig_37767

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_52753 1 2376 bp MLOC_52753.1 Available Available LOC_Os06g08120.1, FRAME:-1, EVALUE:0.0, 13106.m00849 protein plant protein of unknown function domain containing protein, expressed
MLOC_52820 2 1611 bp MLOC_52820.2 Available Available LOC_Os10g40730.1, FRAME:+2, EVALUE:6e-133, 13110.m03776 protein expansin precursor, putative, expressed





CDS Structure of MLOC_52753






CDS Structure of MLOC_52820






Contig Sequence (5395 bp)

>contig_37767 5395 assembly3_WGSMorex_rbca.fasta
GGGGGGGAGGGGGGAGGGTGATGGTGCACGTGGTTTTCCTTTGGTGTCAAAGCCCTGGCC
CTACTTTTAACCATCACCGTACGAGTTCAAAATCCTTCATAATGTAGCACAACTAGATGG
TTAGATTTCTTGTGGTGAAATCAAACCATCAGAGTTCAAGTCCTAAATTTGACATGTATG
GTTGCATTTTTCTACATTTATTTCAAGTCCTTCAATAATGTGTGTTCGGTGAAAAAAGAC
GTGCCATCGACTACCAAGATGTCTGTATCGACTTTGTCAATCAAGATGTTGTGTCAACGC
AGTATCTCACACATGCTCAGAGGTATAGGTTGAATGGTTGTGCGTATTTGTGAGCATTTG
TGTTTGTAGTCTGTTAAAAGAATCTACAGCACAAGCTCCAAGAAACTGCAGGGTCTAATT
CCCATAGAGATTTCAAATCTTCTCAGCTGCTTGACAATAACAAACCCATAACAAAATGCT
TACGTGTATATAGTAACTCTCTCGGCAATTCTATTTGTAGAAAATAATCACAATTAGTAT
GCTTTCAAACGAATGGCATTCATACAGAGCTACAAATAACCTCACTTGCCCCAGTCAGAA
TCCAATTAAAAATCAAACACAAAAATGCACAGCCACTCTCCAAAAATATATACTTGCAGC
CAAACCAAACACATGCATGCCAATTATGTCGCGTAGCCGGACCCAGAAATGCACGCATAT
GCATGCATGCATGCAGACGCAGATCACCCGCATATCGACAATTCAATTTTCAACGGGGTT
ATCATTCCCCCGACGCCGCCGTGACGGTGACGGCGCCGAACCACCGGGAGCAGGTGTAGA
CGGAGCAGAAGGCCTGGAGCGTGGTGAGCATCAGCATCATGATGGCGGCGAGGAAGGTGA
GCAGCTGCCACGAGCTGAACACGTACCTCCGCATGAACCGCTTCGTCTTCACGCGCCACC
GCCCGTCGTAGTACCTGTTCATCTGCTCCACCGCCACGTCCACCGCCGGCACCTTCGTCA
GCCGCGTCGACCTGCTCATGCTGTTCCACAGCTTAGTCACCTCGCCGTCGCTCTTCATGC
GGTTCAGCACCACGCCACGCTGCCGCAGCAGGGCCACGTCGGCGTCCGTGTCGATGATGC
CGTTCATCAGCTCCGTGTACCGGGTGAGCACCAGCGGGCCGGACGCCGCCGACGACTCGT
AGGCCACAAGGTTCCGGATCATCACCTCCGTGTTGCTGTCCAGCGTCACCACCGGGAGGT
GCAGCGTCGCCGTATTGCAGTCGAAGCAGATGGTGGACAGGTCGCCGGTTGTGGCTGCTA
CCTGCACGCCGGCGTTCACGAGCTCGGACACCGACGGCACCATGATCTCCTCGATCAGCG
GCGGCCTGCTCAGGTGCCCCGCCGTGGACGACGACGACGGGTCGCCACGGCCGTCGGCGC
CCGACATGAAGAATGATTCGACGGGGTGCTTCATGCCCGACATGCCCGGCACGACGGTGA
GCATCTTCCACGGCGCCTTGACAGCGAACGCTATCGGCCTCATCACGTAGTGCAGCGGGC
CTTTCCCGAGCTTCGACGCCATGCCCCACAGCGCGGCGAACAGCTGCGCCACGTACTCGG
ACCCGCCGCCAGACGGCTTCTCCTCGCCGTCGCCGTCCGCCGGTTGCTCCTCGATGTCGT
AGTTCTCGCCATGGTCGTGTGCCTCTGCCGTCGTGTCCTCTGCCGGCGGCTTGGGCACGA
GAAGGTAGTAGAGCAGCTCGAGCAGGTGCGCGTACTTGGCGACGTCGACGGCCGGGAAGG
CGCCGTCCATCATCTTGAACGGGCAGAGCTCCTTCACGAGCCCGGTGACCATGCTCGTGA
GCAGCACCCCGGCCTCGTCGGCCGACGCGCACTGCGGCTCAAGGATCTTGCGGAGGAGGA
AGAGCGGGATCTGGTTCTCGAGCATGAGCATGTCGCGCAGTATGAGCCCGTGCGCCGACT
TCCTCCCGGCGAAGTCCACCAGGTGGGCCATCCTCGACGACACCCTCCGCAGCGCCGGCT
TGCCACCGTCTTCGGCGACGGCGTAGATCTGCAGAAACTCGAGGAGGAAGGCGCCGTCGA
CGACCATCATCCAGGTGAGCGTCAAGCCGCTGAAGTCGAGGTAGCGGTGGTAGTACGCGC
GGATCTTGCGCTCGAGGCGGTCGGCGAACTCGGCGACGAGGGCTTCGAGCTTGAGCCCGG
CCGGGCGGAGGCGGCGCTGCGCGCGGCGGGCGGCGGCGAGCTTGTAGCGCTCCATCTCAT
ACAGCTCGGGGCGCCAGTGGTGGTAGGGGCCGAGGGCGATGAACTGCGGCACGTATGCCT
CCGGCTTGTGCACCAGCAGCTGCTTGGGCACGTTGAATACCGACACCGGGATGCCGTTGT
CGTCCTCGTCGTCGCCGTCCTCCGTCAGGGACTCCCGGATCTGCACCACCCACCGGAGCT
CATCGAACACCAGCGGCCTCCCGCGCCGGCCGCTGCCGCTGCCCTCTTGGTCGGAGCTGG
AGGCCATTGATTTCGGCTCTCTCGATCGCTACGTGCGCGGTGCAGAGTGTGTGCCGCCCA
CCACTACAACCACTGAAGCTGCTTGTTGCTTGTTATGCCCATCAATGGTGGTATATATAT
ACAGTACTCTACTAGTAGTGGATAGTAATTGATGGTTTGGTGAAATCTATAAATAGCGAT
AAGAACGTGGGAATTAAGAAGAACGAGGGGTTCTGTTGATGTCCCGATCGAAGGTACTCC
CTCCGTTTCACTTTATAAGTCCGACGCCTGTATCTAGGTCGTCAATTTAACCAACTTAAT
GAAAGACATATATTACTTTAGATGTTATTTTTTAATGATATAATTTTTATGTTAAATAAT
ATATTTTATATAAATCAAATTAATGACCTAGGTTTATATATATTATTATGTTAAATAATA
TATTTTATTTAACCAACTTAACGTGCATGTCTTATAAACTGTGACGAAGGGAGTACGTAC
TCCAGAAGATTTTCGGCTCTTTTGAAGATTTTGGGCTCTTTTCGTTTGAAAATTCGAAAC
ACGCTATTCTTTTGACTACAAAGTAGGCACTCTACCATATTGTGTGTGGCTTGCTAGATG
GACACTGGTAGCTTTGTCTCCTTCGTTTTTCACATGCGTGTGTTGTGTCTTTCTCGGGGG
GGACAGCCGCAAATCGGGTTAATTAGCTTTCCAGCCTTCTCGTGAGTCATGTATGCCCAA
TGGGTGTGGTTAGGTCTCAACCGAATCAAGTGACATAACATATAAAAAATAAAAAATATC
ACATCAATTTTCACGCAAGATCTTAATAATATGACATCGATTAAGACGTAACCAAGTCTC
AGTCAACTAGGATTTAACAACACTGATGCCCAATGGTATGTCAATGCTAGCTATGGACAA
GTTAATAATCGGTCGATAGAAAATAATGGGACGACGTAGTCACAAACTGACACTTCGTCT
ATCCTTAGGGCCCATTTGGATTGAGACATCATGTACTTTTAATTCCTGCAATATTTGAAA
ATACTGGGTCAAATATATAATAATGTGTCTTTGGATATTCACGCAGAAAAAAGATATGTA
TAAAATTTAGTGAATTGATGATAGAGAGTAGAAAGATAGAGTGCAAGTGTGTTGACTTCT
CAAAGGAAAAGAAAAAGAGATTTGAGCTCTTGTTGATCCTCGTATGGTTTAAATGGGCAT
AGAGATGGATTCTATATGAATTTAGTGACCAAAATTCTGTGATCCAAATTATTTTATGGA
TTGAAATTCTTTAGATTTTGATTGAAATTCTTGAAAGTTTGTATGAAATGTTTCCAATCC
AAAGAGGCACATGTAAGTATATTTGGTTTGTTTCTGGGTCAACTATTTTTAAGTTTGACC
ACATTTATAGAAAATGATATCGACGCCTATAACAAAAACCACTGCCAACAAATACATCAT
GAAATATATTTTTCAATTGATTCATTTTTTATCATAGATACCGAAATTATATAAGTTTGG
CAAAACATTATGACCGACAAAACAAACAGGACTTTCCCCCCTAAAAAAAGGACCTCAATA
AAACAAACATGGTAAATTGAATGTTTTCAGTGACAACTTTAGTGACACGAGGATGACAAG
TTTAGTTGACAAGTATGACAATTCCATGTTCATGTATTTTTTTGCCAGAAAATGGTCGTA
TGTGTCACCTAAACTTGTCATCTTCACATCACTAAAATTTCTATGGAAGATGTTCAATTT
GCCATGGTCAAATTCCAAAGATTTGGGATTTATCATTTCTGAAAAAAAAACTTACATTGT
GGGATGGATGTAGGGAGAATGTGTTACGCAATTCTGGGCCACTAAACTAGTGTTCAACCC
CTTTTCGTCACAAGCCCGATGTATCATTGTACTAGCAAAGTCCAAACTCAACCATAAATT
AACACATACTTATGTATGATATCTTAATCCCCGCTCATGGCGGGTAATAAAACAAACCTA
TGTACACCTCAAGATATTTTGAATTTTGGGGCCAACCCAATTAATCGAATACTTACGCAG
TTTTTTCCATGGGACAACCAAACTGGGTGCTCTCTCGAAAGGGCGTGAGAGGGCGTACTA
GTCAATTTTCACGTAGCGTGCACATATTGTACTGCGGTACTCTACTTGGGTAGTTAACTA
TTCCCTCCGTATTTTTTCTTCTAAATTTCCATTATGTTCCTTTCTCTTTTGTTTTTCTAG
TGTTTCCATGGATTTTGTTTTGATTTTTTTCTCATGGCTTTCCTTTCCCTTTCAGTTTCT
CGCCTTTTCACCCTTTTGTTTCTGGTTTTCATTGACGTATGCAATAAGTTTATATACCAT
TTGTGCATGTGCACTATGTTGGCAATACACATTAATGAACAAACACCACACAAACACATG
GAAAGTACACAAGGTGATTTAGGAAGTACATACACTAATGTGGTAAATACATACACAAAC
ATGAGAAGTACACATACAAGCACATGGAAAGTATGCACACTAATTTCGGAACGACACGTC
CTAACACGAGAAGTACACACAAACACGAAGAGAAGGATAGACGCGCAAAAGCAAACACAC
TAACCCACGAAAGTACACAAACTAATATAAGAAGTACAAGTATATTACAGTTGGGAGTAC
AAGTATACTATGATGAGGACTACACCTTGCGTCAAAAGAAGTTCATTGAACGTTATTGAA
AGGACGTGGATGTCACCTAGGGGGGTGAATAGGCGCTTTAGAATAATTACACCACCTATT
GAAAGGACATGGATGTCGCCTAGGGGGTGAATAGACGTTTTAAAATAATTATGGTTTAGG
CTTGAACAAATACGGAATAAAACTAACACTCAATTAGTCAAGCACAAAACCTAAA