morexGenes - Barley RNA-seq Database

Contig contig_37761
Source Contig contig_37761
Contig Data
|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|
morexGenes
Links
Map Locations of contig_37761 (9602 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
No map location	No map location	No map location
Predicted Genes from contig_37761

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_52740	3	1729 bp	MLOC_52740.2	Available	Available	LOC_Os06g04250.1, FRAME:+1, EVALUE:1e-171, 13106.m00377 protein phosphate-induced protein 1 conserved region domain containing protein, expressed
MLOC_52742	1	375 bp	MLOC_52742.1	Available	Available	None
MLOC_52741	1	2535 bp	MLOC_52741.1	Available	Available	None
CDS Structure of MLOC_52740

CDS Structure of MLOC_52742

CDS Structure of MLOC_52741

Contig Sequence (9602 bp)

>contig_37761 9602 assembly3_WGSMorex_rbca.fasta
GTACTCATTTACATCTACCTATTGTACTTGCGGGTTATAAGCTTGGCTATAGATGACGTG
TCAACATCATATAGCCAGCAGCTGGCTGTACTATTAACCATGCTCTAATACACACTGGCG
AAGCTTAATGTAGACCAACAAGGGTCATGGCCCTACTTGATTTTTGCATCCATGCAAACA
CTTGCTATATTTTAGGTCTAATTAGTGTTTAAATTAGATATTAGGATCCCTTTTCTATTA
ATTTGGTTCTCTTTGGATAATGGCCCTTTCTTCAATCATGCGCAAGCGCCGTCACTGCTT
ATACAGCAAAATTAGTTATAACGTTGATTGTAAAATTAGGATTTTTTCTGATTTTCTACT
TTTTTTTTCATGTTTATTGCATCTGACTAGAATCTCGTTTATAGCTAGATTCTTCTATAA
GAGCTTACTTTTTTTTCATGTTTCTTTTTTCTATATAAATAAAATCATTGTACTTGCTCT
CATCCCCGCTTGATATGATGGTAACCGGACGCCGGTGCGAAGGGACGAGACAGAGACGCC
CCGCAATCTGGCAGCCGGGTCCCACCGATTGCTTAAAGTCTAGAGCGCGCGCACTTGGCT
CATGCTTTTTTTACTGTTTTTATTTTTGAAATGGCAAACCACCCATGCTAACGTACTAAG
CGGTACACAATCGCGCTTTTTCTTTTCTTACTGGCATTCGTTCTTGCGTGGAAGCGCAAG
ATGTGGTGCGGTCGTAAAGCTGGAGGGATCCATATGCGCTTCTGGTCTTCCCACTTGACT
GGCAGTACAAATGTGGTGCTACAATCATTCATGTAAAAAAAGAAAGGCAAACGTGGTACA
AGTTTTCACTCATGTCACTAACTTTACTACTCCAGAAAAATTAACTTCCGAGAAGATTAT
AACCGAGCCCTTCTTACCTCGAGAGTGAACAGTGAAAGCTAAAAAATTGATACTGTACTA
AATTTGATACCTTTTTATGACAAGTTTGGAAAAATATTTTAACTGTTTGTAAGATTTTAT
ACTGAAATGACGGGGTGGAATCCGTGACAAAGAAAACAAATGCTCAAAAAATGTTATTTT
TAAACACCGACTTAGTTTTCTCCTACCACGATTTACACAAATATCATTTTATGACGGAAT
CTTGCTAGCTTTCAAAGTATATGTTGAATATTACCCATTTTTTTGAAAATTTTACTGCGC
ACCCGTGCTCAGTTAATCCGCATCAATAAAAGTGTAGCCCATGCACGTTACAGGTTGACA
CTGACGCAGTAGAAGGAATGTTTAGTGAGCAGTAGATTAGCAGGAACACCCCACGTTCCA
GTTCCACCTCTCCCTTAATTTAATCCCCAGACAAAACCATAGAGCCAAACTGTTCCATCT
TTGAAACCCCAGAAGCGCCAAGGCAAGAGCACTGTCCCGTGTCTTCCTCTCCACTCCACT
CCACACTCCCACTCCACACCCCCACTCTCCCTCCATGGATTTTACAGTCTCACCACCACC
GTCCCCCACCTTCTATAAAGCATCCGGGGCCAAGAACCTCCGGTAAACCGCGCGTCATTC
CCCTCCAGCCAGCCGAGATGCCGCAGCGCGGCGGCGCCCCCCTCCTCCTCCTCCTCGCCC
TCGCCGCGGCGCCGCTCGCCATGGCGTGGCGCCCGTGGCCGCCGCGCGACGCCGTGGCCG
CCCTCGGCGCGTCCAAGAAGTTCGAGGGGTCGTCCGACCTCGTCAAGCTCGAGTACCACA
TGGGCCCCGTCCTCGCCGCCGACATCACCGTCCACCCGATCTGGTACGGCGCCTGGCCGG
CCGACCAGAAGCGCACCATCCGCGCCTTCCTCCGCTCCCTCTCGCCGCAGTCCCCCGTCC
CGTCCCCGTCCGTCGCGGACTGGTGGCGCACCGTCCGGCTCTACACGGACCAGACCACGG
CCAACGTGTCGGCCGTGGTGGCGCTCGGGCAGGAGAAGTGCGACGTGCGGATGTCGCGGG
GCGCGTCGCTGTCGAGGATGGACATCCAGTCCGTGGTGAAGGACGCGGTGACCGCGCGCA
CCAGGCCGCTCCCGGTGGACGCCGGCGGGGTGTACCTGGTGCTGACGTCCCCGGAGGTGC
GCGTGGAGAGCTTCTGCGGGCAGGTGTGCGGGTTCCACTACTTCACCTTCCCGTCGGTGG
TCGGGTACACGCTGCCGTACGCGTGGGTGGGCAACTCGGCGGGGCGGTGCCCGGAGGTGT
GCGCGTACCCGTTCGCCATCCCGGCGTACGTGCCGGGGCGGCGTCCCGAGGCGCCGCCCA
ACGGCGACCCAGGCGTGGACGGCATGGTGAGCGTCATCGCGCACGAGCTGGCCGAGATGG
CGTCCAACCCGCTGGCCAACGCGTGGTACGCCGGCGGGGACCCGTCTTTCCCGACGGAGA
TCGCCGACCTCTGCGAGGGCATCTACGGCACCGGCGGCGGCGGCGCGTACACGGGGCAGC
TGCTCACCGACGGCCGGTCCGGCGCGTCCTACAACCTGAACGGCGTCGGCGGGCGCCGGT
TCCTGGTGCAGTGGGTCTGGGACCCCTACCGCAGCTACTGCTCCGGCCCCAACGCGCTCG
ACCACCACTAGCTTTTCGTTTCTCTTTCACCATCGTCGCCGCATCTAGCGCTAGCGGTCG
TCGTAGTATTCCTCCAACTCCAGCATAGCATTGGATTCCTTCCTCGGGACATCCATGGCC
GGTCCTCCTGTATAGAGTTCCGAAGCATGGTGGTCCGGTCGCCGGTCAGTGAGCTCATGA
TTTGCTGACGATGTTTTGGGCTTTCATTCAAATTCGATGTCATTTTGTGCATCTGGATAA
CATTTGAAGCATCGGGAGTACCAATTATTGGGAATCTGGATGAACAACCATTGCCATTGC
CATTGCCATTGCTTGCACAAACGTAGTAGGAAAGTACGTACGTACACGGCTGCGTCCATC
CCATTCCCAGGCGTGGGCGTTGCGCGCCATGCGTTTTCGAGATCGAAATGATGGCATTGA
TCACGGGTCGCGTGAGCAGGTGCGGGTGCAGCATCACCGCAATGATGGTCGACGGGGCGT
CGCGATTTCGTTCCGTAGCGCACTAGGCTTTCACTGCTAGGTGTCCTTGGATCGAGCGCA
GAGCACTGCTGCTCGGTGGTCACGAGTACGCACCGAATTATTGAGACCTAATGGTAGCTT
GTCACTGTGAAGGAGCCATGGCCGAACAGTTCCATGCCCTCCTCTCCCCGCCATGATAGC
TGGGCCGCTTCCTCCGTATCCTTTCATTCGTCCTGCTTACCGGACATACTAACACCAAGC
GTCCTACGGCATTATTGTCATGGGATGCAATTTTTTCCTTGTAGGTATAGAAATTCAATA
CACACGGCCAATCATGTTATGGATACACAATGAATGTTCTACCAAGATGTTATACCTGTG
TGGATCATGCATCAGACCTCCCCCCTTATACATATACCGCGCCATCTTCGCCAAAGTCAG
TAGGAAGCCCGGTTGTTTCGTTCGTATAGAGAATGACCACGCATGAACCAAGGGGGAGGG
GAGGACATATGACCTATGAAATCCGGAATGGGAGACATCAGAATGTTAGCAGCGTTGAGT
ATCTAGCCATACAATCTCATGAGTTCTCCATAGGCCGCAAGCCTCATGTGTCCAAGCGCT
AATGAGTTCTCAATGCCGAGAGATGCCCCACCCAAATCCTCTGTGTCATGGTCTCTATCA
GATGCATCCTCCGGGTGCATAGTTACGTTTCGTAGCTCCCCCACCGCGAGCATCGTCCGC
TCTGAATTGTTCCGCCCAAGCATCACCACAGCCTATCTGACTAGCGATCTTGGTGATTGG
GCGGGTGGTAATCACGACGGCGAAGGTTATGTGAATGTGGTTCTCTTGCATCAAGAGGTG
TGCAATCCCTTCGTTGATGGGGTGATGCGGTTCTTTAGTGCTCATGTGATGGCTACAACC
CAAGCTGCCGCCTCAACCTTGGGCCTTCGGCTCGGTTGCAAGAATGCCAAGCGCACTGCG
GTTGATGTTCGTTCACTCTTGGATGACTTTTAGTGACCGATGTCTTTCGGTTCAACAACT
TCGATCCAACTTGGTACCGCGAATCTGAAATGGTTTTCTAGTGAAATAACCGGTTGCTTC
TCAACTACTTACAATTCATATTTTGGCTTATGATATTGTCTACCGTGTAGACCACTATGA
GCCAGGGCTTGATGAACGTGAGAATCATATTAAGGTTTGAGTATAAATGAAACTAGGGTT
TAAACGGGACCATCTTCGGAGTGGTAATATTTCCGTACGTTAAATCAAGAAATGAGTGAA
ACTCGTCTATTTCATCTTTCTCATGCAACGAATTGTCTCGCTTTGTTCACACTCGTAAAA
AGTAACACGATAATCATTTCTACACGAGTGTTACACTCTATTAGGGTTTGATTTGTCCTT
TTGATGAAAGATAACGGGATTTGATAGCCGGTTATAGTCTAAACAAAGTCTTGATATGCC
AATATGCACAACTCTAAATTAATATTTGTATGCCACAAAAAATAAGGAAAGGGTGCAAAT
GGACTAGAAAAATGCAAGCCTAGGATAGTAGTAGGAGAATGCCTAGTAGCGGCGTTCGAA
AACTTGGTTACCAGCACAGAGCCCACACACGATGGTATAACGCGAGTGATGAGTCCAAGT
AGCGATGTCCACTTCCAATACCGGCGATAATGTCTTCGTACATGCGCGGGTAGGCCAGGC
CGTAGATACAAATGTAATTGATGGCGTCCGACACTAGTCAACGCCACTATCAAGTGTGTC
GATATTAAAAATAATAATTGTGTTGCATCATGTGGAATCATAGTACATTGGATCGAGCGC
AGAGCACTGGTGCACTAGGTATAATGATGGTTGATGGCCTGATGGGCATCGCGATGTTTG
TTCCATGGCGCACTAGGATTTCACTGCTAGGTATCCTTAGAAGTAGCGCATATCACTTGT
GCTGCCACCACTGAAAAAGGGCTTATAAGTGAAACATCGATTAGTGGCGGGCGTATTGTA
TATCCGCCACCATTTTTTTTAAAAGAAGCCGTGGCTGGTAATAAGAATAAACCGCCACAA
CTAAGGGAATAATTGTGGCGGGCAGCCCTCAGCGCTTACCACTGGTACAATCTCTATTGC
GGGACTTGCTTGCGTAATTCAGCAGTGACGGGCCCTATCTAGTGCTCACCATAGCTATAT
CACAGAGCAGTGACGAGCGGTGATTGACAACCACCACTAGTTATCTTGACCGGATGTTTA
GTTTTGGCAAAACATAGTTGTGACTGGTCCTGCTTACCGATCGCCGGTGCTAGGTCAAAC
GAGAGTGGCAGGCACTTTGTGAGACCCTCCATAGAATAGTTTTCCCGTGTTGGTGTGTTG
CCGAAGTCACTTAGCCGTGGCAGATACTAACTTGCGCCCGCCAGCGCCAAGACCGCGTGT
AATGTTTACTTTCTCGTTCAATAGCTTCCCCTCCCCCACCACGCTCTTAACTCACCACGC
TCTTAACTCTCCACGCTCTCGCTCCCACCCGTATGTCCTGGCTAACCCTCTCCCCGTGTG
GCCGCCGGCTTAGTGTTGGCCCTCCCCCCGCCGCCGCCCTACCCTGTTTCGGCCCTCCAT
GCGCCGCCGTTGTCCCCCTTTCCGGTCTTCCCCCATTCGGGCCCTCCCTGCCCTGCCCCA
TCCCTCGTCTAGGCCCTTCCCGCACCGCCACCCTCCCCGTGTGCGTCGGCAGGCCACTAT
GAGTATCTCACTCCGCCCACCCACCGTGAGCACCTCCCTCTCCCGTGTCTTTAGTTTTAG
GTTTATTTTTATTAGATGGATTGTTAGATGGATGGATGCATGGATGCATCATGCATTGAT
GAAATTTTAATTTCTTTCATTATGAAAAATGCCACAAAAATGGATAGATCCAAATATTTT
ATATGTTTTGTGTACTATATTTGTTGTTACATAGATAGATAATATGGATGTTTGAAATGA
AGTATCATTTTGCACGGAACACATGGAGTGGCCTATGTTTTGACGAAATATTGATTAATT
CTCATTCTGAAAAATTTCAAGCGCTCAATATGTCCTTTTTTTCAGTAAAGGTCATGCCGA
AATTTGTTATGACTAATGCTATAAAGTACAATATATCGAGTGCCCGGGACACTTGTGTTA
TAAATTTTGGCATGACTTTTGCTAGATTTTTTGATGCGTTTTTGGACATGTGTATGATAC
TGGGGAACCCGGCTGGCATCCTCTCTGGCCTGCAAGGCCCCCACCGGTTGAGGAGTCTTG
TTGCGTGTAGGGCCTGCCGGCTGCAGGATCCCGTCGGTAGCACGGGCCCGCCGGCCAGTC
GCTGCTATTGGTGCGCGCTCGTCCTGCAGTGGCATGGGCTGCACTGTGTGACGTCGCCTT
GCGGCGGCCGGCTGCGGTTAGCGTCCACCCCGTGTTGTTTGGAAGGAAAAAAGGAGTAAA
CGGCCTGGATAGGCCTAGGGTCTCCCTCCGTCAATATCCGAGCTTGTAGGAGGGAGGGGG
TCAATGAACATGATGAATAACGCGAATATGGCTTTCTCTAATCGGTTGCGCGCGCAGCGG
GAATCGACACCGAAGCTTTGCCTTGTGGATCAGCGCGATGTTGTCCCACTTGGACCCATC
CTCTGCATGTGCATGATTCTTTTCTCTCTTGCTGTGCAGACAGTGACACATGCATGCCTA
CTTTATTTTCCCTCTTCCTTCTAACTCCATCTCTTTCTTAAAAAAATTGATAGTTTTGGT
GGCTCATATCTTTTAAACCAAAAACTCGTTTTTCAAACTTTTTACATATTTGAACTCGTG
ACATCAAGCCCTTTAGAGCAAGATCAGTCTTGGATACATTTGAAAGATTTTTTTTGTTGG
AACAGTGAAGAACTTTTTGAATAACGGGTCTGCACTTTGTTAGAAATATGAAAGAACTTT
GTTACAAACTGTATTTAAAAATGAAGAACTTTATAAATAGCTTGCCAGAACTTTGATGAA
AATTTTACGGAACTTTTTTGAGCCACACACAATATTAAAGAATGTATTTATGGTAAACTC
AAATGAAAAAATTCTTCAATTTAAATATAGTCAACATTGGTATCACATCTCCTTAATTTG
TATACCTTATTAGCACGAGTAGGCATGCATGCATCAAAAAAACTCACTTCCGAAAGAAAA
CGCTGCATGGCGCAGACAGATGTGGGGCCTGTTGATTTGACCACATGCGGATGGACGGCA
ACGATATGAGCTGCGCGCGCATCTAGTTAGGATAAATCCGCGTCCACGCCGAGTGAACCA
TGTGCCTGCGGCCTCTCACAACGCATGAATTTGTTTTTCAATTTTTTTATAAAGCAGGGG
CAATAGACTGTATCATCCACTGTATAATATTGTATTGCACCAATTATCACGTTGTCTCAA
AGTTACCAAAAAGAATATCTCATGTGTTCTGTTCATGAAACTCAAGTATTTGAAACTTGG
TTAAGAAAAAAACTTGATTATGTTCATGTCGAGGTGTGGTTCTTTATTTTCATGCACAGG
GCACCAAAGTCCAATACTATATGACAGGCCCATCTCAAACGGTTGGCCTTGAACCGAGTC
GCTTCTTCTCCTGTCCTGTTTCCCGCGTATATAAATCTGTTTCGGGCTGCAATATCCATT
TGCCATCCGGAACACCACCATAGCACCGCTCGGTGGCCAATCCAACCGCTCGAAGCGCTG
ACTTTTGGATGGTGAGGGCGACCGCGCCGACCCGGCGGCCGCCGTGGGGCGCCGCCATTG
CGCTCTCCACCGCGTCGCAATCCTTCGACCGCCGCGTCGCTCTGTCGGCGGCCGCGGCCG
GCGGCATCTGCTCGCAGCCACGCCATCCCAGCATCAACAACCGCCTCTGGGTGCCCGACG
TAGTCTCCCGCGGTCATGGCCGGGCGAAGAAGGCCTGCTCGTGCTCGCCAACGACGCACC
CGGGCTCCTTCCGCTGCGCGCTGCACCGGGGGCCCTCGCCGGCGCCGGAGCCGGTGTCCG
GCTGGCTGCACCATGCGAGGCGGTCGGCCACGGCCAACTCGCTGGTGCGCACCGCCTTGG
TCGAGGGTGGAGACCACGTCAGGCGCGCGCTGGCCGCCCTCGTCCGCCATTCGTCGCACC
ACCAGCGTCGCCGCTCGGCCTTCCGCGCCCTGCCCAGCCGCCTCTCCGCCATGTACGCCG
CCGCCACCGAGCCTTCGCCATCGGCACCACTCTGATTCGTAAGACCGTGTAATTGCCACT
GCTTTGTTACCCACTGCCGGAAGATTTGTAGCAGCTCATGCTTTTCCTTTGCCGGAAGAC
TTGCATTTTGCCACTATTTGTCGATCGTTCGCTGGCTATTTCGCACAGAACGTAGTTGGC
TTGACGCCATTGACGCCAGCTACGGAATGGCAGGATTGGGATCTTATCTCAGGCTGCAAG
TTTGCTCAAAGAAAATGAATTAAATGATTGACTTTGAGAGAGTGCTGTGCTGTGCTGATT
ATCGATTGACATTTGCGCTCGACCAAGTCGTGACAGAATAAGTCGTGTGCCGTCGCCTGA
AAACAAAAGCGAGACCAATGACTTGTGTCGACGCAGGCAGCAGGTAAAATGAACCGACAG
GCGACTGCTGACAGCACACCCATGGTAGTTGAAACGTCGGCATATTAACGTGCAGAGTCT
ACTGTAGGCCCGGTCCTGTTCGGAAACCAAGAAAACATTTCAAACTACACAAGAGAAAGA
TTGCCATATTACTCGTATTCGTTTTATATGGAAACGGAAAATCGCATACCAATTACCAAA
TTGGCCTAGGATTCAACAAAAAATAGAAAGCTCATACACAAACGTGTGTCTACGACTCCA
GCCGAACCCAACCAAATCACAATACCAGCTGAACCAGCAGGGGTCCGTAGTTGTCGGCGA
TTCACGTGTGTGGCCATCTGTTGGCTTGTTGGCCAGGTTGGCAGGTGGCGCCCATTTTAT
GGTTATTTTTTTGAGGTTTAACATCTGCCGCTTTATTAACTAATCAAAGGGAACATAAAT
CGCATCCGAAACAATCCCCAAAACACAGTCCGAGGAAGCACCAAACCACACATCACAGAG
TTCATCACTTAAACTTAACTTAGCTAACTTATCCGCGGCAGAATTTGCACTAGTTTTAAC
CCGATTTTCTATCAATTAACAGTGCAATTCTTATTTCTTCTTAATCAATAAAAATGATTC
GTTCATACCTCGTTTCAAAAAGAAAAACCCAAACGAAACAGAAAAACGACCAAAAACAGA
GGCAAGGGGCCGCAGCCTTGGAAATAGCCCCCTCACCGACCCACAAACAAAAGGAGGTAC
GTACTCCTACGTGACACACGGTGAATACTAATAGCAAAACCCTATTAAGGCGAATAGTTA
GCCTGGCCACTAACGCGATCAACATATTCAGATTTAATATTTCAAATATATAATTTAGGG
AAATTCATCAATTTTTTCTACAAGAAATATGTTTTTGGAGTGTCAAAAGTGTTGTTATTT
TTAAGATTCTTTTGCAATAAAACTTAGAATTTGTCCAATTACCTGTTGGAAATATGCCCT
AG