Contig Data
morexGenes
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Map Locations of contig_37738 (5577 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map location




Predicted Genes from contig_37738

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_52717 1 837 bp AK248159.1 Available Available None





CDS Structure of MLOC_52717






Contig Sequence (5577 bp)

>contig_37738 5577 assembly3_WGSMorex_rbca.fasta
TCTTCCTTGTATGTATATTGGGTTGGGTTGTTGTTGAAGACTGGGTTTTTAAGCCTGCAG
TTTAGAGCAGAGTTGAGTTGTCCATGGTTGTGGTGTTCTTACACGCTTCCAGCTCTTATT
CTATGGAAGTGCTGCTATAACCCACATGGGACGGCCTAACAAAATCTCACGCGCTCAGCT
CAGTTTTGTGCCATTTTTCATTTGCTCGATTACTTTTTCCACGCTCTCTCAGCAATCATG
TTTATCGATTTAAAAACAATATTAAATAAAAATATGCTCATCAATTATCAATTTTTTTAC
TGAATTAAAAACAGAAAAATCACGATTTTAAAATAATAATAATAGTATGTTTGCGGAGTT
TCAAAAAAATATTTTAGAAATATAGACATAAAAACGTTCTTGAACTTTTAAAAATATTCA
TGAATTTGACAAAAAAAAAATTCAAAATGTCCATCGTTTTTAATGTTCATGAATTTTATA
AAAATAGTCATGAGTTAAATATTAAAAAATAAAATAAAATGATAAATAAAAGACAACCAC
AAAAAAAAGAAGGCAATGCCTTCTAAAAAAAGGCATGGATGTATAATGTCTTAGATCAAT
ACAACAACCCATCTCTGCAAAAAACTTTTATGATGTACCAAAACTCCTATATGGCAATGC
TCTGTGTTCCCTTCCCTCCTTTGTGACATGCACATAAAAAGGTTCAAGTCCCGATGTTTG
CATTTATCCAGCCCTAACTAGACAAGCAAAATAACAAGTTGAAACAAGGCAACTGAAGAA
GACAAGCAAAATAACAAGTAGAAACAACGCAACCGAAGAAACACGCTAACCAGCTGGTCA
ATCAGGATATAATCTGAAAACAAGACTACAGTTCGTTCAAAGAATTTCATGCCCCAAACT
GAAAAATTGAAAATGAACGAAACGAAGGTTATTGACAATAGATACGAAGCTGCTGATGAC
CTGGTGCTCATAAAATAGGAAGGATTCAGAGAGATACACACATGCGTCCATGCACAAACA
ATAAAGACCATAGAGTTTCACCACCAAGAATTAATTAGCCCACAGCCGGTTCCCACGGTC
CAAAAACATAGCCATCATACGAGATCTGATATTCATGGTGTTACCAAGTATTCGAGGATT
CATGAACCAGAATACAGGTTATTTACCCACATGGCCACCAACACATAATCTTGTTCAAAT
CATGGAGGCATGCAAATTCAAACTGAGCAATGTCAAAGTCTACACACATTGTCTGTCTTG
GGAATGCTGTAACCCAGCGTTGTATATCAGATTTACAGATATGAAAGTCTGTACCGCATT
CATGTTATGAGCCAGAATCACTTTCAAGATGAAACATGTTCTAGGTGACCAAATACAAAG
ATGGTAGAAAAACACACACGAGATTGCAAGAGACGGTGCTCCGTATGTTCCTTTCATGCT
TCACCGGCCCAGAAGAGCGACACGGTCCTTCTGGATGACCTGGGCTAGGTTGAGGTCAAA
GAGCTCACACCGGATCGGCATTTCCATCTCGTAGAATGGGTTCTTCAAAACAAACTCAGT
GTACAGCTCATATATTGTTTTCAGCAGGATTTCCATATTTTGAGCGCCTGTTTCGCATAC
AACGAAAAATTTCGTCCCTGGAGCATGCCGAGTAACCAGCCAGGTCAGTAACTAGACAGC
GCCAAAGCATAAAATGAAACGGTTAATAGTTAAGGAAACCAATCCACAATTTATGAGCAT
AGTTGGCGGATGCTGATTTGAAACTAGATTCATACCATTTACTAACAACACAAGCTCGCA
AAGATAGTACAGAGAGAAAAACTGAAGGGCATCACACTTCCAATTTTAGAATATCTACTT
TCTCATATCAAACATTTAATATACCACTTCCCAGTTTTGAAACACTGCCTAGAATTCTAA
CCAAAGAAAACTTACCAGATATAAGAGGATAAGTTAGCTCTGGCCTCTGGTTATAGGCCC
CACATTCACTTCCGCATTCGGATAAATTGGTAACATAATCCAGCACTTTCATATGTATTT
TTTGCAGTAGCCATGAACTACTCAATTATATAAAAATACTAAGCTGGTTCATTTCCTAAT
CCTACAGAAAGTGCCCTGTGCTGTGGTTGCTAGGATTCAAAGACCAGGAATAAGGCACTC
AACCTCACCTATCTGCCAGCAAGGCCTAGTCCATATAGTGCAAGGAAATATGGCTTAAAA
TTATTTCTGGTTATTTTATTGCTTCATCATATGGAGTACATGCTGCCCCTTCAGCGGGGA
TGGTGCATAGCCCCTAAGAAAATGATTCCCGCCGAAAGGAAATTTATCTAAGGATATAGA
CCTAAAAAAAAGCACGGATACGGCAACATGGACATGGCTACACACACACGAGGACACGGG
ATACGGCATTTTCCAAAAACAGCCAATCGGGGACACGGCGACTAAATATAAAAATAAATA
GATATATTCCATGTAATATATAGTTAAAGACAAAAAAAAAAGAGAAACTGAGATAGAGAT
TAGAATACTGCCCCATTTTCATTTGTTGTCTCCTTTTTCGAGTGCTCAACGATTGAATTA
ATAGATCCTCTAGACACATGTTATTGCAACTAGCAAAATACATTAGATGCAGGTCTAATT
TTCACCCTCATCCACAGACGACTGGCTACAGTCAGCCAGCAGGTACCAACATGCAAGTGA
GCAGCAGCTCAAGAGCAAGCAGCAACAGCATGGCCGCATGGGGAAGCAAGCAGCAACAAG
TCAACAGCAAAAAATCAAGCAAAGAGATGAAGAGGTTGAGGAGAGGCTGCTGGGGTCATC
TGCTCGAGCGTGGTTGCCATCGGGAGGTCGAGTGCAGGAGAGGCGGTGATCGAGTCCAGG
CAAAGGCGGCGGTCGAATCCAGGCAGTGGCGGTGGCGGTCGAATACAGGCGGCGGCGGCG
ACGACGCGTTCTTCTGGGAGCAGCGTTCTTTTCGTGGCGAGCGTGTGTGCGACCCAGCAA
AATAGGGTCTGTATCAGGCCAAGGCTTTTATTGGGCTTCCCGTGTCCCCAATGTATCCCA
GCCGTGTCCTTGCTTTTTTTCTTTTCTTTTAATTCGAAAATCAGGGGATACTGGGGGGCA
CACGTATCCCGACGTATTCGGCGATATCACCGTGTCCTGCCAAATTAGCACGGCAATTCG
GCAGTTTTGGCCGTGTCCATGCTTTGTAGATATAAACTATCCTAATCCGAGGACCTACTA
CGGGGTGCCTACGCCGCTGGTATACAGTCATGCCACAGAGTTCAATGGGCAAATCTACTA
CCGTAATTAGTATGATTGAAGTGTCAAAATAATGGTACAAGGTGGATATATTGATCTGTA
GTTATGTACCAAGGAAGTTCTGTACTCATGTGTCAAATTCTTTTCATGAACTAGCAGTTA
AAAGTAGCTAGCAAGTGGGAAGCACAAGGAAGCCCTACAGTAGTTCCCGTTGAAGCAATA
TACAACTAATTTCACATATATTGCCCCGCAAAAACAAAAATCCCATATTCCCATCAGGAT
CAAATCCAGAGCAGATTCAACTAGATTGTCAATTGAGTTTTGCTACTGCCTATAGTTTTG
TGGGTACGGGTCTACTCTAGCATGACTTGAAAGTTGAATAGAAACAAATTTGTTATGTTA
GTACATAACAGTTAATGCACATCATTCACGAAGGAATGGTTATGACCTACAAGTCCAAGG
ACTGATAAGTTTTGTTTCTGCTAGATGGCAAATAAAAAAGATAAAGTACATAATTCAATG
ACGTCACTTAAGTCAATACGCACGTATTGTGCTCAAAACATAACTTCTGCAGATAATGGA
GAGGCCACATGTGTTGCCGTTAATAATTTGCATTTGCATGAAATTATATTCTGAAAATTT
AGAAAAGGTCAAATTGTGTATGTTTAAGGGACCAATTGTGAACTAGTAAGTGCAAAATAA
AAGAACAGCTTGTACCACTTAACTTGAAAATGTCCACTATTAAAACATCATTCACTACAA
CACATTCACTACAACCAAAAAAAAAAAACATCATTCACTACAACCCAAAAGGTACATAAA
CCCACTAGCATAAGCAAGCGTGTGGTGAGGATTTATCATTATCAAGCACGTGCGTACAAC
TTAGGGGAACTGAATACCTGTGAGGGATTGGAAGCAATGGAGGTCAAAATTGTGGGCTTG
TAAGAGGTCAATGCCAGTACAGCCAGTGGTAGGGGACAGCTGCTGGGAGATTGCGTGCAT
AGAGTGCCAGAGACTCGCGAGGCGTAAACTGTCGTTGGTGTCCATTCTCCCTGCCGAGCC
ATAGTCCTGGGGAGATGTGCATGTTGTTCAGACTCTATCTCTGGTTCTGTACAGAATAGA
AGAGGAAGAGAAGAACAAGATACCTTGTAGTATATGAGGCCACCAGACTTATTGATGATG
AAAAGGCTGTAGATCGCAACTGTCCCCATGGCCACAGGAGAAGGCTGAGGAGAATTAACA
GCTAAATTCCTGTATCAGATGTAGATAGAAAGATATACATCAGATAATCAACGACAAATA
AAAGTTTGGTATGTCAGTACGTGTATATACAACTAACCAATGAACTGGCCACATAACTTG
TTCAGAACTGAAATTGTTCAGACAGATAGCTTTAACTTGGACATCATAACGATACAAAAG
ATTCAAATTAAGAAATGCTAACTCCACTGCCTTGCGTACAACCTACTTATACCATTGCTG
CTATCCAGGGAAATGCATAATCCGTCGTTCAAGTTGATGCCATATGTTTAATTTGGTGGT
GCACAATTAAGCAGTGGAGCGTCAATCTGATCCAAACTACTACATACAGACTAACAAAGG
CTGTGTTTGGTTGAGCTGTGGATTGTATACAAACTGCTGTGAGCTGTGAGCAAGTTGCCG
TGAACTTCCAGCTGTGGAAAAGCTGGAAGCTATTTGATTGAGACAAGTGTGAAATTGTAG
ATTTGGCTGTGAATTGTCTGTAATGCCTCTGGGGCCTGAGTGAATATGTTTATATGCAAA
TAGTACATTGGTCAATTTTACCAGGAAAATGTTAACAAGATAACAATAACAGGAAGAAAC
AAATTTATCTTACAAGCCTCCTAAGATGTACGCTTCCGCATTTGTAATGGCCACATATGC
TGTCACCAATGTCAATCATTTTCATACAAACACCTTCCAGGCAAACTCCATTACACAATA
TAATCTCACAATATGCAGGAGCACATAGGAAGTAATCATCATGTTTTCCAATACATAACA
TGCACCGCAAACATATTTAATCATACAAGAAGATCACTGCCTGCAGTTTTTTTAGAGGAC
ATCCATTGCAATTCATACACTGCAAAAAACTTAAGAGGACATTCACTGCAATTAGGACAA
CATAGAGTCGGCGCCGCCTGCAGCGAGCCAGCAGATCCGGTCGATGAAGGAAGAGTGGGG
AGAAAGGAGGGAGGAGGGAGTACCTGGGCCGGCAGGGGAGCGCTGCTCCGGGCGGCGGCG
CGGGCTGGAAGTTCGCCGGAGGGCCGGCTGCAGTGTCGGTGGCGGAGAAGGAGAACC