Contig Data
morexGenes
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Map Locations of contig_37685 (8183 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map locationNo map location




Predicted Genes from contig_37685

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_52653 2 4484 bp MLOC_52653.1 Available Available LOC_Os01g24480.1, FRAME:+2, EVALUE:2e-89, 13101.m02589 protein DUF1399 containing protein, putative, expressed
MLOC_52652 8 3846 bp AK353843 Available Available None





CDS Structure of MLOC_52653






CDS Structure of MLOC_52652






Contig Sequence (8183 bp)

>contig_37685 8183 assembly3_WGSMorex_rbca.fasta
GGGGGGGGGTGGAGGAGGAGAGGAGGCCGCGATGCTGGTGCCCCCGCCGGACGTGCACCT
CGTCTGGCTCTGCCACTGCTTCCACCATGTAAGCCTTCTTGCCGCCATGTCTTCTTGTAC
TGGTTGCGTCACTTCTTCATGACTTGCTCATTTTTCTGGAGGTTACTTTACTGACAGCAA
GGTCAACGTAGCCTCAATAGTTACAGTCACAGTGTAGGAATACAAGATTACCTTGCTTGT
TCTTAACAGAATTTGTATTTTGAATTAGATCCCCTCTCAGGACTTCATTTTCTCAAAACC
AAACCAAAAAAAAAAACACTAAACTTTAGGATCTTGTTATATTTGAGCCTTTAAAAATCT
CTGACAAAGTATACGATTTCAAGTGGATTCTTCTGTTCCCAGGAGAGCTATGTCGCATAC
TGTGCATCAAGGTTTGGACGCCTCATCAATCGACCTGCAATACTTGATGCTGAGAATGAG
GAGCATGCCGCTGACTGTTGTCGGGACATCTGGGACGCACGCTACCCATTGGAGCCGTTT
GACTTTGGCAGCAATGAATTTGATGGAAATAATTCGAATGGCATTGAGAACGATGGTGCT
AATAGCGAAATTCTTATGATGGTTCAAACATACGCTGGCCTAGCAGACCACTTTGCCTCG
CCCTTTGTCTCCGAAGGCGTCTACCATGTCGCTGCAAGAAGGCGTTACATGTGTTTCCTT
GACCTCATCAGAAAGGGTGTGTGCACAACCAGAGAAGACATTCGGCTCGTGCCTAGCCTG
GATATATTACTGATGTGGCTTGCTCATCAGGTATGCGTAGTGACGACTTCCCAATCATGT
TAAGCTATGAAGCAAAGTAGCAACCAAATGCTTTATTGCCATCTGTATATCAGTATATAT
ACACTTTACACAGTTGTTATGTATCCTTGGCAGAGCTTTCCAGTGAGCTATGCAATCGAC
ATGACAGGGATGTCTATCCAGGACAATGTTATGAAAAGGGTCGTCAGTTATGGGGAGGTG
GCGAGTGAGGAGATGGTGGAGGGGACGAGGATCTTATGGGAGGAGGCATATGATGAGCCA
TACGATCTATCTGGTTCGGAGATTGATGCGGCAGCAGTTGGCACGGCAAGGGAGGCGTTC
CACTGGCAGGCTGCAGCATCAGAAGAGGACACCAACCGGCTGTATAAGGGGTTGCAACCT
AGATTTCTTATGGAGGTATTTCTTAGGCTGTCCAATCATGTTTTAGCTTTGTGAGGAACT
TATGATACAGATTCATATTAGCTGGATTGATAGTGTTCTTGATGGCTGGCCAGTAAAAAA
CAATTTCTACTTGGCCACTTAATTCCATTCAACTCTTCTTCACAGAAATTCCATCTGCTT
TGGCATTTCCTTATGTCTTGGATTGATAAAGAACTGAGAACTTGGGAATCTGCCAGGCAT
GATGTCCGCAGGCCATCATACTGTGGCAAATATTAACAAAACATTTGTCAAAAAAGCAAA
TAGTTTATTCCACATGGGCACTTCAAGACAAGAAGCCCAAGATGCAAGATTACCTATATT
GAATCTGTTAAGTAGTGAATGTAATTGGTAGACCTACAAATATTAATACTTTATCGCTCA
TCATGTCGTGAAATATGCCGTGGATTTTCATGTGCCAGAACCATGAGTTGGTCGCGAGAT
CTTATGGGTTTCACCTCTAGCCTACCCCAACTTGTTGGGGACTAAAGGCTTTGTTGTTGT
GTTGTTGCTGTATAATTCAGTTATTTAATTATCTGATCACAAGAGTCCACCAATATAACT
GCAAGTAAAATGTTAATTCTTGTGTGCTTCTGTTCTATCCTTGAAAGAACACAAAGCTAG
AGTTTGCACCGTTGTTGAGTTAATGAGCATATCTGCACCTACTTATTAGTATTTGCAGCT
GATACGGTATTCGGAAACTAGACACACATATCTTTTTGTACTTCCACTGAAAGTTCTTAG
AAATAATATCATACCTAGAAGGCATGAACTTGATACAGGAACACTTAGTGCCAATTGAGT
TCGCTGTGGGGGCGTCTCCCACCGCCTTTCTATTGAATACTGAAAAGTAGAGAATTGGCC
CATGGTGCACTACAAAATAAGGTAAATTAAGTTATTATCTTAACTCATTATTTGATACCC
AAAGGAAAGCTCACAACTATTTCTTTTTTGGTTTTACTAGATAATTGCCCCATGCGTTGC
AACAGGGTAACAAATAATTTGTATGCCGTGATTACATACCAAAAAATGGACTTTAGCTGC
CAATTGAATCGGCACTTCCTTAAAAAAAAGAATCAACATTTATTGACTTGACAAAAAAGA
CATGGTTTAATTTGGTAAACCAATAAGATGTGTGTGGTTTTCAACGAAAACATGTGGGAA
AAAACCAGAGAGAAAAAATCAAAATGGAGAGGGGGAGGAGGAGATGATGTATGTAGTGGG
TATTAGACAAAGGTGACGAGCGAAACGCTGGTGGGTGAAATAGGGAACCTTACATCATTT
TTAGATAGTAAAGAAAAGATGTTAAGTATGTACCTATTTTGTTTGTTGACAACCATATCA
TTGATTCTTGATAACAGGTATGTGTGTTCCTGAAAGGAGAATTTGACAGTGAGCACATTA
GCAAGGAATTTCTGCGTTTGCGAGCACAGAGGTGTTACAGATCATTGAAGCTCGACAAGT
CAGTGTCCAATTTATCCTGCAAAAACTGGCAGAAAATGTGGCATATGTATTGTGAATTTG
CAACCCGAGGTCTCACCATTGAGGTAAGGCGCAGCATGGGCGGGTGCTTCAGGAACAGCA
AGATCCTCAAGAATATATCATTCTCATGGAACGATATGCTGCATGAGAAATCACTTATGC
TTACAGAGGAGCTTGATACCAGGATTAGGGCGATGGCATCGATTACCCCTCCCATTCAAG
CACCTTACTTATTGAAGTGTGTACCTGACAGAGTCACTGATGATGGCGGGGCAATGATTT
CTGACGTCATATTGCGCATGAGAAGTTATCGTCCGCAGGAAGGACGGTGGCTGACCCGTA
CAGTACTTGATTATAGTGGGAAAGAATGTTTCGTTGTTAGGATGAGGTATTGTTCAGAAT
CTATATGTTTTTGAGTTTCGGAATCTATAGCTTAACACTATTATGTGGCACATACCACAC
CCCTTAACAAGTTTTTGGTGAAATTTCTAACAAAATACGTCATGCAGTCCAAAGTTAACC
CTTTTGCTTTGATATGAAGTAACAATCTGGTGTTGAGTGATTATGTTACTAAGCTTATGC
TGGGGGGAACGACATTTACTGCTATATCTCAATGCAATTGTGCTAAATTCAATTGCAACA
TGTGTAGAATAGGCAGAGGGATTTGGCGGAGAGGACCAGAAACTCCCATGGCAGTGAAAT
GGGAAGATAGGATCATTGAGGTCCGAGAAGGCTCATGGTCCTATATTGCAAGTGCAACAT
CCGTTGGTTATGCTCCAGGTAACTTCATTACACTGAATAATTGCTTGATGTCAGCATTAT
ACCTTGTCTTGAGAGGTGCCTAGTTTCCCCTTTGTGATGCAGAAAAGGTGGTTGGCACAG
CAACGCCAACGAAATATCAACAGGAGAATAAGGTGGTTTGGCGCTTTTCAACTGGAGATG
TAATGACAGTGTGGTTGGGAGATGACCTCAACTTTCAGCTACAAAATGAGATTTCAGAAG
AAGAGGTATGGTCCCATAAGTTTCTTTCGCTCGATTTCTTGATGCATCTTTTTCTCTGGA
ATTGGAGTTAGTATAGATAGATAATAGGTGACGTAGCTTTCCTTCATTTTGTGTTCATTG
CTGAAAGCTCTGGCGGTATGCACATTCTATCTTAGTTGATTTAGTAAAGCAGTTACCAGA
CAAAAAGGATTAGTGCACTCATCTTTATTGCTTTAAAAAATGCAATATAATGTCATTTGA
CTGATCAACCATATTTTTACATGTTTTCTGTCTAACGCGGATGTGCCGCTATTTTCATTC
CGTCAAATATTTTTTTCATCTTAGACTAGCTAGATTCATCTGTGATAGATGGCATATGAC
TTGCACCACACATGCAAGTGGAAGTTCAGTTCGCTACTGATATAGGAGTAGTACTTGATG
GACTTTACAGTGCCATTTTGTAATACCTTCTAACTGTACCGCGATAAAAAATTAGCAGGC
AAGGGTGCTTGTAGGGAGGAGATTGAGTTACAGCGTAAAGAAGGACATCACATCAAATAA
CCACAACCACAATGAGGAAGAGCAGTACATCACCCTTGTCCGTACATCACCAGACTATCC
TGATGGCAGAGCAACCGCGCTCCTAAACTGGAAACTACTCGCAATTGAGTTTCTACCCAA
AGAGGATGCAGTCTTTGTGCTCCTCTTATGCACGGCGATCGCACGAACAATGACAGAGAT
CAGAAGGGAAGATGTGTCCGGGCTTCTGGTGCGGCGAAGAATGCGCGAACCACAGGTAGG
GCAGAGAGACTGGGGCTCGGTGATGCTGCCGGACGCGCCTTCCCTTGACCCTCATTTGCA
GCCGTGGTACCGGAATGCGGCGCGTGTTTTGAGCTCCGCGGAGACTGTGCTGCCTAACAG
AGCGATGCCCGTTAAATACTCGCCTACCGATGGCAAGGATGAGCTGTACAGGCAAGCTCT
TATACCCTGAAGCCCTGATGGGGATACTTTTTGTGAAGCAATGTACATTAGCCACAGATC
TTTTTTTATTGTGGCTGTACACGTCATCTGAAAATGGCTTGATTTGTTGTTGTGTATGGT
TTGTTTGTCGATAGATAAAGATCTTGTATTGCTTTGAGTATATTGTATGTAATTCAGAAT
AATACGGGAGGATATCCCAGAACATGTTACAAAATTGTCGCAGAAAATATGCCTGAAACA
GTGGGATTGAATAACATCTTCACATCAGCGATCTTGAAGGTTTGCATCATGATTGTTGAA
CATATCTATCCCCATTTTCTTGTCTCTGTTTCGGAAAGACTATCCCTGGCCAATTCTACT
CTATTATACTCCCTCCGTTCCAAAATAAGTGACTCAAGCTTAGTACAACTTTGTACTAGA
GCTAGTACAAAGTTGTGACACTTATTTTGGGACGGAGGGAGTACTACTCTACGTACAGTG
GGTTTGTATCATGCAAGCATCAATCCACATCCACAAATTAACCCACGCTGCGTGTATGTA
TGATTGTTTTCCTCGTGATTCTTCCTTGGTGGTGCAGCCGGCTGGATTTGATGAAAACCG
ACCCGGCCATGAAGCCCAGGAATCTGCTAGGTAGATAGTGTTAGTTTCAGACTTTCCACA
GTGAGTCATGAGGAGGAAGACTGGGTCTGCTGCTGAACCCAGGAATGGTAGTCCCTCAGC
AGCTGCTCACCCAGCATCGGCACAAGCCTGTCAAGCAGCCCTTGCATCAGCCTGCCAAAG
TGAATGCCTATGTTAATTAAATAAAAGTAACACCGATCAAATTCAGTTTATTTATTTGTT
TGTTTTTGAAACAGGTGAAATTCAGTTTCACAACAATTCAGAAAACGGCGTAAATCGAGG
CGTCCATTAGGCGCTTAAGCATCTCGATGGGCGCGCCGATCCGTTCAAAGCTAAGTAGTT
TCTTGCCACTCTATAATCATCAGGAAAGCACTTGATTGTACATTACAGCAACTTCCAAGG
AATGCAGGGCCTTACAGGTTGCCTGGTTTCTCCACTGCCGACAGCGGGAGCAAGCTGAAT
GGCTTCGTGTACACCTGAAAAACAACATACGAGGAACTTGAGGGCTCGTCTTGTAGGAAA
CCCTTGCCATCTACTCATCTCCCTGGGAGCTGGGATGGTGATAATATTCAACTGAACATA
TCATCTTAGTGCCATGCATTAGTGTGAATTTTGTGATGCAAGCTAGTGAGATTGTGATCC
CATCCTCATCTAGGTGCTATGCTGTATCACTGAACTGAATGCCATATTACCTCCAGGGTG
ACCTCCAGATTGACATCGATGTCCAAGCATGGCTCCTCATCACCATTGTCTCCCCATGTT
ATTCGGTTCGTCATTACCGCTGCCAACACCCAACACTCCAGCTCAGGCACATTGTATTTC
CAATCCGAACAAACAAACAAACAAAACTTAGCCCAACAACTAACTGGTCATTGTGATGAC
TCTATCTATTGGGCAGATGGAGTTGATATGATTATTGCTAGACAAATTCGAATTGGAGTT
TGTGCATTTCTTTGGGCTATATGGAACTTGATGTGGTTTTTGACAGACATACGAATATAC
ATTTTTTGCAGGTATTTCACAGAGCTGCGGCATTGATCCGTACATGGTCGTTACTCACNN
NNNNNNNNNNNNNNNNNNNTTTGGTTACTGGGTCTATCCGATGAGAGATGGTAGCGCGGG
ATATCTTCAACCGGTTTAGATGGCGGTCCAGTAATAGGATAGATGGTTAGGCATCTAGGC
CTGTTTTACCGGTTGTGGCACCTTTTGATCTACTATTTATTCTTTACTGCTTTGTTGGAA
ACTATGAACCGACATCCGTTTGTTTATTTTAATAAAAGGACCGTATGCATCGTGCTGATG
CAGAGGCCGGAGGTAACACTCTTTTTCTAAAAAAAAAATCTATTGGGCAGGTATACTCAA
ATGTTAAAGCAAAAACCTTATGCTGCGAGGGTGAAACTATGAGCAGAACATAAACTAACT
GAATAACTGATGCAACCATTCCACCACTGGTAGAGATTAAAAAAAAATAGAAAAGGAAGA
TTAGCCCGGCCTCTGCATCTGAACGATGCATGCAGCCTGACAGAGATAAAATGCTTGCGA
AGAATGTTAGCTAAGCATGGGCTGATGAGTGATGACCTGAAAAGAGCTCATTCTGCTGCT
CGATGGAGTCCGAACCCTCAAACTGTCACCAAAGGCAAATCGAACACGGTTCAGCAAACA
ATTCATTTTCATCTGTATGTATCAGTCACAGGGACAGGGAGAATAGGTCCATGGAATGAA
GCATGTGTGTGTTAGTACCCTGCAGGAGAGCATCTCGACGGTGCAGTCGTCGCGGGTCGG
GGTGACGCGGAGGTCCAGGACCGGTGCGACCTGGAAGCCGAGGAAGCCCATGGGGTGCAG
CGTGCACCTGAAGGTGCCGTCCGACTCCGACTCCACCGGCGCGAAGCTCTGCAGCGCCCG
GGTGTTGAGCAGGGACTCCACGCCGGCGGGGTGCCGCAGGAACTCGCCGATGCCGCCCTG
GTCCGGCAGCGCGTCCAGGAGCCTGATGCTCTCCCGCCGCCTCGCCGACAGCCGGGCCCG
CCTTCCCGACGGTGTCGTCGCCACCGTCGACACGGACTGGCCGCGCTCGTCGCCGCCGTT
GCTGCCTGCCGACGCGGCTCGCCATGACCGGATCGCCTTGTTGGGCGGCTTGCATGGATC
GGCAGCTGCTGCTACTCCTGCCGCCCTTGATGATGCCGGGGCCGGGACCGACTGGCATCT
GGGGAGGAAGAAGGAAGGTCCGGTTGCTGCCGCAGTGGGCCTCATCCCATCGCCTGGATC
TTCTAGGACGCGGCAGCTTTACCTGTGCATGGACATGGACTCATGGAGTGACAGAGAGCT
CAGGGAAGAGAGAGAGAGAGAGAGAGANNNNGAGAGAGAGAGAGAGAGGCAGAGCGGAGC
CAGCCACTGATGGAGCTTATCGTTTTTGCGCCTACACCGAACTCGGTCTCTGGTCTCTGC
CAATCACCCGCAGCCGTCGTACACAACTAGACATGGGCGTGAGTGTGTGGTTCCTGACAT
GCTCCGCTGTCAACTTCGTACCGGGCTCATGTCCATCTGTCAGAGCCGGAAATTTTCCAG
GCCAGTTTGGACAGTTTTCTCTCAATTTTTGTATGGAATTTTGGTACCAGCAATTTCGTA
CTCTCTTAATTATTAGCTATCGGTTTTATAATTTTTTTACATAGAAAGTACTACGCCCTT
GGTTCTAAAATAAGTGCTGACACTTATTTTAAAATGGAGAAAGTATATTATAAGTAAAAC
CTTAACTTTTTTTAGGTAACCTCAACCATTTACTTCTTCTCTTTTCTTAGTCAACTCTGT
ATTCACATGCAGTGGCGGATCTAGTCCACTGACCAGGGCGAGTCAACAGTGTTACCACAT
ATATATATATATATATATATATA