morexGenes - Barley RNA-seq Database

Contig contig_37653
Source Contig contig_37653
Contig Data
|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|
morexGenes
Links
Map Locations of contig_37653 (5817 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
	No map location
Predicted Genes from contig_37653

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_52605	1	1036 bp	MLOC_52605.1	Available	Available	LOC_Os05g42120.1, FRAME:+3, EVALUE:4e-96, 13105.m04479 protein heat shock protein, putative, expressed
CDS Structure of MLOC_52605

Contig Sequence (5817 bp)

>contig_37653 5817 assembly3_WGSMorex_rbca.fasta
CCCCCTCACCGGGGCCCATCTCGGCGACTCTCCTCGCCAGCACCACCACCACCGCCACCA
CCGCCCCCGCCCCCGCCCCCTCCCCCTACACCCCGCCGCGAACTCCACCACCACCGTACG
TCCCCTGTACTATATAAGACGAGCACCCTCGCTCAGACCCCCTCAGTCCCCTGCCTGCCT
TCCCCACCAGCCAGCCAGCATCAATGCCGAGGCGGGCGATCGAGGTCCGGGCCGACGGCG
CCGCGCCCAAGTGGTGCATGTCGCTGCTGGAGAACACGTTCACGGCGTTCCTCAAGTCCC
CCGGCGCCGACGCCGACGCCAAGGCCGTGTTCGCGGAGGGGTCCCTCTTCAGCCCCTACC
TCTTCGGCAAGTTCTTCGACCCGGCCGACGCGTTCCCCATGTGGGAGTTCGAGTCGGATG
TGCTGCTCGCCGCGCTCCGCCGCGGCGCCAGGACCTCCGTCCACTGGTCCGAGAACGACT
GCGAGTACTGCCTCAGGGCCGACATACCTGGTACGCACACGGCTCGCTCGCTCCATCCAT
TGTTTCTAGTACAAGTACCACATACATAAAAGATTAGATGCTTGTTCAGGCTGAGAGGCT
TCACAATGGTTAGTAGTATTTCGTTCTAGCTTCAAACTGAAATCGTCTGTTCACTCTTGT
TGAAGACGACTTAACTTCAGTGACAAAAGCACAGTAATATATATATATATATATGGTTAG
TATTTTGTGCAAGCTTCAACTGAAATCTCTGTTCCCATGTGACAAAGGTACCACCAAAGC
TTTAGCATAGATTCGCCGTAGTAGAAATGCATGGACGATCTGACCCCTGTAACAAGTGCA
CGCATGCACTCCTGATCGTTTTCGTTGCGTCGATTCTCTGGGAATGCATCGATCAGCAGA
TGGTTAGTAAGTTACCGTGCTCCTCTGCCGTCCATCGATGAACACTCCACCTCAGAAGAT
GCCACACGGCTTGTGTTCCAACACCTTTGAATTCCTCCACATAAAAAGATGTTCAACTTG
CTAGCTAGCTATCTAGGGGAAGTTCTCGTGTGTGCTTTCCCCGTTGCTATCTCTTTGCTT
TTTTCCAAGCACTATGGTCATGGTCACGTGCAGCCTTGTGTCGCCATCACTTTTCTTGGC
AAATTATTCGTTGCGTCTGCGTGTGGCGCACCACTTCGATCCGGACCAGAGCTAGCTGTG
CCGCTTACGGAAAAGCGAGCGGAAGATTGTGCCACACGATTGCCAAAACCAACAATGCCA
AGCACACTTGCATTATCATATCGTATTGTACACATGGTACTTGTGCAGTATCTAGCACTG
ACTTTTGCTCTCTTGGTATTGATGATCATCAGGTGGAAGGAAGTGCGACGTGGAGGTGAG
CGGCGACGGCGCGCGGGTGGTGGACGTGAGCGGGCTGTGGCGGGTGCCGCCGGCGGACGG
CCGAGACTGGCGCGCCGGACGGTGGTGGGAGCACGGCTTCGTGCGGCGCGTGGAGCTGCC
GGAGGACGCGGACGGGGGCAGGGTGGAGGCCTACTTCGACGACGGCGCGGGGTCGCTGGA
GATCAAGGTCCCCAAGAGGAACAGCGACGCCCACCAACAAGCCTGAAGGAATCAGAACCT
CGATCGACACGCGCAACTGGGTTGGATCAGACTAACCGGAGGACGGCATGCATTTGCCGG
TGAAAGGCAATTATTCTCCTTCTGATGTGATGATGAGCAGTTGATGGCGACTAAAAAGAA
CGCGTAATCTCGGTAGAAATTCGGAAAGATATGGCCGAGACGAAAAGGGGCAAAGATTAC
CTATCTATTGCATGATGTTACAAATGAACAAATCCGATGTAGTAATAGTGTATGTTCTTC
AGTTCCACTGTTAAAATGGCTAATTAATCAGCAGTGTCGCTGTCAGTTTCGGTCGTCGAT
CGAACGGGCTAGGGCATCGATATGATTCTAGACCAGATGATTATATGCAATCCGTGACTT
TTGATTTTTGAAAGGCAGATTCTCCCATTTCTTTCGGCACGATGTATCTCCATCAGTCGT
CAGTCATCACCCCTGCCCCTTTATCCCCAGTGGGCACATGAGCATCAGAGCTGTGAGGAA
AGCTGCCGTTGGCTCTTTGAGATCCTCAGGTGATTATTCTCAAGAGAAGCACGGTGTCCA
GATGATATTCGATGGTTTCAAGCGACGATTTGCTTTTAAATATCTTCTAAAAGAGGCCTT
GTTTTTTCTCGGGGATACTCATGAGACCAGTGCATCATTATTTTTGAAAAGAAAAATTAA
AGCTCAGGTTCCAAAACTATCGCAGAGTCCAAATTTGGCACCTCAACTACTTCCTCCGTC
CCAAAATAACCGTCTCAAGCTTAATACAAATTTATACTAGACCTAGTATAAAGTTGAGAC
ACTTATTTTGGGATGGAGGGAGTACATAGCAAAAATTCCTGACCCCTTAAGTACTGAAAC
AATTTAAGACCCTCTTAGCTCGCGAACGTTCATAGGGAACGATGGCATTTGTGAATGAAT
TACATGACAATTTTAGTTGTAGACTTGTAGCGGGGTGACGATATTTTCACAGTAGGGTGA
CAATTTTCCCGTTCCGAAATAAGTGTTTCAATTTTGTATTGGTTTTAGTATAAAATTATA
CTAAATTTAAGACACTTATTTTGAGACGGAGGGAATAGTAATAAGTGTGACAATTTCCCC
GTCCCGAAATAAGTGTTTCAATGAAGGCACACTTCTTTTTAAACTGTCATCCTTTGATCA
AACGGCTGTAAGTGCATTCACTGGGAGTTCCAACCCAACAAATATTTGCTAGTTAGCATT
GCTGTTTATCTGTTGCTCCATTGAAACCAATTTTAATTGCGACGTGGCAATAATTTCACA
TTCATGGTAGTGTAGTGAACGCAAAATATCCACGTACACAAAAACAATTAAATTTGGAAA
GTAAAAAGCAATAGAAAAAACAAAGTTATGAAAGAATGACAATTTAAATTATTTTTGCAG
GAAAAATAATACCTTATTTATATAAGAAGGATTTTAAAATTCAAATTATTCTGGAAATTT
TTTGACTTTGCTAAATTTGGGAGCCCATGGAAATTTTGGTAAAGTATCTTTTTATACTAT
TTTCCAGTTCCATAACTTTTTGCAACTTGCATTTTCAAAAAAAGTTTTTCTATATTGTCC
TTAGTATTCAGATATTCTAAAATATCTAGTGATATTCACTTAAAATGTTTGTAACATTTT
TTCCTAAACAAACAAGTTTTCTGTATTTCATATATTGAATTTTTTAAATTCAGTTCCCTA
CTTTTATTCAAATTATTCGAGTTCTTTTAGAAAAATAGTTTTAATTTTTCCATTTTTCAT
GATGTTTTGTGCTAATTGGGGTGCCACACGTGCGGAGTCATAGTAGCATCATTGTTAAAA
CTATTTTGAGTTGGTCAAATAAAAAAAATCAAGATGGTTTGGACATTTGAGATCATTAAT
AATTTCTTGTGTTGAAGCTTAAGGACCTAAGGGGAAACCACCTAGGGCCAAGGTCTTGAC
GGAAAGCTATATATGAATATATTTTTCAGAGTCCGTTCGTTGTTCATAGTTTTGCTAGTC
CTATTTTTTTAGACGGAAGCATAAGATTTGCCTCATCAATTAATTAAGAAGAGAATAGAG
TTTGAGAGTTTTACAATAACCCCAATAACACGGCATGTCAATTATTCACGCCTAATGATA
TTCCCTAGCCGCTTAGCACCCGTGGTAACCCATAGGTTTGCCTCGTTGCAGATCGCCCTC
AACAAAATAAGTGGTGGAGCGCCCTTGTTCCGGAAAATGCGAGAATTTCTTTCATTCCAT
ATGGTCCAAGATAGAAGCATGGTTATGGACGTCATGGCACTTCTATCACGTGTTTGTAGA
CCAGTCATTTTGTCCCACCAAGCCAGGACAGAGTCTTGCATGTGCCAACCCGACGTGTCA
ACATGGACAAGGCCGAAAGAATCGATTACCAGACGCCACAGCCAGTGGGTGTACCGACAC
TTGAAGAATAGGTGTGGGCCTGTTTCCTGCTCCCTCTTGCATAAAGGGCAGAGTCCGCAG
TTATCCCAACCGCGCTTCTCAAGCCGGTCGGCTGTCCAGATTTGGTCTTGCAGAGCCAGC
TAAGAGAAGAATTTCACTTTCGGTGGTCCCCAAGCCTTCCACACCATGCGTTCCATAGGG
GAGAGAGTCATCCCTAGAAACTGCGCCTTGTAAGCGGTGGAGGAAGAACAAATGCCATCA
CTGGAGTGCTTCCACACAATGTCGTCCTTAAGAAGGTCATCCAAAAAGACTTCATGGAGA
AGCATCCAAAGAGTGAAGAATTCTCGGACGTGGGCACCGGAGACGACAATGTTATAGTTT
ATCATGAATATCCATGCATTATCTTTGAGGGCTTCACGCACCTTCCAATGCACCGGAAAC
GCCCCCACACTATGACCTAGCAGACCTAGGCTCCACGACAACGCCCTCAAGGGGGAGAAT
GACGCCGAGCACCGCCGCCGCCGAGTCCAACGAACAAAGGTCATCACCCGGAGCCGTGAC
ACTAGGAGAAGAACCGCAACAACATCTTCATGAAGAGCACGACACCCACGGGTGTCATCG
TCGTTGGCGCTAAGGCACGGAGCTTTCGCTCGATAGCTCACCCGTTCCACAACAAGGCTG
CCAAGAGGAGCACGATGATGTTAGATCCCCATATTCGGATCAGGACGCCACCTCTCGAGT
AGAGAAAGCACGTCCGAGCTACCCGCCACCCCACCTCCTGTTGCCCTCACAACACGGGAA
GGGGGCCACCATCACCGCAATGCTACCCGCCGGAGAGCAAGCATGCGACCCGCCATCCAG
GGCCGCTGCCCCCGCATCCGTGTCGTGAGATACTGTCGGTCCCGCACCTCATGTCACACA
CAACCACTGTAGGAAGAGTGATGCCTGACCATCAACTCCTAGCCCGGCATCAGTCCCCGA
GTCTGGGTAGATGCCTCCACCGTAGGAGGCATCCACACCTTCATCCCCAACCAATACCCA
ACGGACTAGAGGGGACACGACTCCGAGATTCCGACGGTCGCTGACAAGCTAGCCCCAAGC
CCATGGCCAGGCGAGCTCGCCCGACACCATGCCCATGGTTACTCTCGCCGATCCATGCAC
CGACACACCGGTATCACGACCACCACCTACGAGCACCGTACCCGCGAGGGAACCCGAGCA
TCCGTGCGGGCACATCCTGGGTCACTCCCAAACTCTCCTACCCGAAGCAAAAGCTCTGAT
ACACCGTGGGCCTGATCTGACACACCCTAGCACGAACCCTAGATCTGGCCCATCCTTGAA
ATGCGTGCGATCGGCACCATCGGTAGCCGCCCAGCCTGCGCCCCATCAGACCAGATCCGG
GAGAAGGAGGTTGACACCGCCGCCCCACGCCGTTTGAAGGAGACTGTACACCGCGCCACC
ATAGCCCCGCCCGACACGCTTCATTGCCCAGCCTTGGAGCTGCCCAGACCGAGCCCACCC
CCGAGGCCGAGCACCTTCGCCGCCCGCAGCGCTTGCCACTGAAGGGGAAGCACATAACAC
CGGCTCCTAACGCCATGGCCCGCGCCGCCTGCCGGCCAGACCAGGCCGCCGCGTGAGGCA
CGCACCCCCGCTGGCTGATGTCGTCGGAAATCGCTCACACCTGGCTCTCGCAGCCCTGCC
ACTCCAAGCCCAGCCGAGCCAATGCAGCCATCGCACACCCACGTCCGCCCACGCCACTGA
CACGGACATCTGCATCGCCGTCGCTCCACCCTATGTGAGTGTTGGGGAACGTCGCAT