morexGenes - Barley RNA-seq Database

Contig contig_37638
Source Contig contig_37638
Contig Data
|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|
morexGenes
Links
Map Locations of contig_37638 (6544 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
Predicted Genes from contig_37638

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_52583	2	818 bp	None	Available	Available	LOC_Os11g14170.1, FRAME:-3, EVALUE:2e-35, 13111.m01449 protein OsDegp12 - Putative Deg protease homologue, expressed
MLOC_52584	10	1587 bp	AK355135	Available	Available	None
CDS Structure of MLOC_52583

CDS Structure of MLOC_52584

Contig Sequence (6544 bp)

>contig_37638 6544 assembly3_WGSMorex_rbca.fasta
CCCCCCAAAAAAGCCCCTCTACAAAAAAAAAAAGATAATTTGACCCCCCCCCCCCCCCCC
CGAGTTGAGATTTGATAACCGTGATCTAAACGATCTTATATTAGTTTACAGTGGGAGTAA
TATTGTAAGTGGTAGAAATTTAAGAAACCCACATAACCAGAGGTTACCCTAGTTACCTCT
TTGATCGTTTCCACTGGTTTACCATCAAATTCAATGACTACGTCGCCAGGAGCAAATCCT
GCGCGTTCAGCTGGTGATCCTGGTGTAACCTGGTAATCCACTAATCTAGTGTTAGCAACT
TAGCATGTCCTAAGTACTATCAGAATAAATAACATGTCAGGAACAGCAGGAAATATAAGA
AAGAAAGGCATTGAACTGTGAGAATTAGAATTGTACAACAAATTAATTCGAGCACACCAA
AAAGTCACACTTACAAGAATAAATAATACTGTAGGTCAGAAACAGCAGGAAATATAAGGA
AAAAAACAATGAACTGTAATAATTAGAATTGTACAATAAATTTAATTTGAGCACAGAAGT
CAGAAACTTAAGAGTAAGTCTTCTGGGCTGCACAACATTTCATCACGACACGAGACGAAT
TATGAATAGCTTACCATTGGAACAAGCACACCTTTGCTTACATCTGGGAAAGAACTTGAT
CTTTCTTTAAGTTGCGCAATGACCATTGGATTAAGATCAAGCATCTTCAAACCAAGCCAC
GGCCGTACAACTCTCCTGCATTGCACAATAGAAAGTAACATCATGCTGGATTTCAGTAAA
ATTATGTAATACTGATGTTCATTCGTCACTAATCAGGTTACTCACTGGTAGAACACAAAC
AAATAAGAGTTCGATAACTCGATCAATCGCATTTTTATCAAGTGACCTTTCAGTATCTCA
ATCTAAGTTCCAACTAGTGGACTAAACCAGGACAAGTTACCATGTGACAAGTATGGCCGA
TAATTTGAATATGGTTTTGGCATCAACATTTGATAGTTGAGTTGTCACAAAATGATAAAT
AACGTGAACAAGAGATGATTCCCACACAAGTAAATTATATATAAGATATCTACAAAATAG
GAAGCAAGTGTATCACAAGCATTGGCATACTGCAACAGAAACAAAAAGATTGGAGGTAAT
TGCATGGCCATGTATGTTCTCATACTTCATAGTATCATCAGTGTGCATGCTTCATCTTGA
ACACTATACTTGGTGGTGGTATGCGTACGGCAACATTTAAGTAATCCAAAAGAATCTACT
TGCAGAAGGTAAATGCAAACTTACTACCTACTCCCTCCGTTCCTAAATCTGAAGTCTTTT
TAGAGATTCCACTACGGACTACACACGGAGCAAAATGAGTGAATCTACANTCTAAAGTAT
GTCTATATACATCCACATGTAGTTCGTAGTGGAATCTCTAAAGAGACTTATATTTAGGAA
CGAATGGGGTATCAACTTCTTGTATACAAAGCGGAAACACCAGCATCATACCACTTTCGC
TTACCTCATACAACGCATGTTCTAAGATCATTCCAAAAGTGTACATAATAGCCTAAACTT
AAACAAAGAAATTTCCAAAGGCAAGGTGAAATACAAGACAGTGCAATAGTTAAATGCAAC
CTGAGCCATACTTCCTCCGTTCCTAAATATAAGTCTTTTTAAAGGTTCCACTAGAGGACT
ACATACAGATGTATATAGACATACTTTAGAATATAGGTTCGCTCATTTTGCTCCGTATGT
AGTCCCGTAGTACAATCTCTAAAAAGACTTATATTTAGGAACGGAGGGAGTACAACTAAA
GACATACCCATTTTTCTTGAAGTGCTCCACTATTTTCACGACATAGTCAATTGGTACTGA
AAAGCTCAAACCATCAGCAGCCCTAACTTTCATCACATTAACTCCAATGATCTCGCCATC
GAGGTTCACAAGAGGACCTCCAGAGTTACCCTACAGCATTTAAATGCGTCCACAGTTTGT
CCTAGAGAAACTGAGACCGAACCAAAAGCACCAAGAAAACAAACCACATATGTTTGCATT
ACATATATATGAGGATACATTGGCAAAAACAAAATAGATGAACGAAGAAACAAATTCAAC
AAAAACAAAGGATGCCCTGTTCTTTAACATTAGTCCAAGAAGAAAGCAGGTACACAAAAT
TTAATTATGTAACAGAAAGCAGATAAAAATTAATCGATACTGACATCTATGGCTAACACC
CGAGTGACATATGGATCAGAATAGAAAGTTGAACGTTGCAACAGGAAGGTGCACACTAGG
TGAATAGCTTAAGCTGCTACTATCTTTTTTTCAGATTTTGCTTCTGTAAATTTTTATGTT
TTCCTCGAAGCTGTTTGGTGCATGGTCCTCATTCTCATAGGGGGCACTTAGGATTATCTT
TCTCAATTCATGATTTTCACAGCTATATTGTCCCAATACAGATTCAAATATATTTATACA
TTCAGTGTTAGTGTTTCCAATCAAATTTTTTTCATATCTCCGCATGTTCACAGAAGAAGA
AAAAAGAGTGTGACCGCTGGTAACAAGACCTAGTAAAATGAGATAATAATTACCAAACAG
ATCAGAATATCCAAGAGCAAGAAGCATGTGCACTAAAATCATGTCCAGGAAGATGAGGTC
AAAGGTCTTACGATATTGATGGCACAATTGGTTTGCAGATACTCCCTTCGTATTCCTCCA
AGACCCAGATCACTACTTTTCCGGTCAACACAACTACAGGAAAATGGGGTGAAAGTGGAA
CATTGAAGTCAGCAAAACAAACAGCAAGTTAGGGGATCAAAAGTGGACCAGTAGTGTTAA
AGATGACCAGTGGATGAGAGAAAATTAAAGAAAAAAGGGTCAGGTTTTACGGAAATCTTA
ACCTTACAATGCCAGCTGTAACTGTATTCTGAAGAGAAAGTGGGCAGCCCAAAGCAACAA
CCCAGTCACCTGGTCGAAGCTTACATGATGATCCAAGTCTTGCAGCTGGTAAAGGTGTCT
TGGACTTGATCTTCACAACAGCGATATCTGAGTGGATGTCAAAATTGAGAACAACGCCTT
CAAATTCACGACCATCTTGTAAACTCACACTAACCTGTTATAAATGACCTGTTTTTAGGC
AAGACTGAGGGAGCAAACAAATATCTATCAAGAACTATTTACCTGGATGAACCAAGATGC
TGGCACAACATTTTAACAGTATGAGGAAGAGGATAGAAGTGTAAGTAAAAAATCTATCTT
AAGCAGAGCTATTTGTTAGGAAAAACGCTGAATTGCATATACTACGGCTTGGATCAAATT
TGACCCTATAAAATTCCAGAATTTCAACCTTGGTACTTGGGTTACAGACTACTGTCCATT
TTTATAGGGTTATTGACTGTTGTTGACTGTTCTAGTGTTCTATAACTTCAAAGAATGATC
AAGGACCAAGGACACTCCATTCATCCATGATAAAGTCAAGGGACAGATTCTAACTTCAAT
TCTGTTTTAATTGGTCACAATGCATCTGTCTTATTCTGTAAAGAAAGTGATGCGGGTAGA
AACAATGAATACCAGTTAATTCAAAAGCTTTGACTTTGTGAGATTAGAGAAGTTTCTCAT
GTCAATTTTTTTTCTTCCGATGTACAGATGGGAAAAAAAGGTGCTATGACTAACAATGAT
ATGGAAATCATTTATGTGAATTTTTACCAATTACAAAGAGATGGTCTCAATTAACTGTGA
TATCCAAAGGTAGAAAAGCATTGTTTATAGTTTTATACTGTATACACATCAACCTCAACA
CCAACTGTCTATGGAGGTATGGCAAGTGATAGTAACCTCAATACTAGCATTCAAGATTTA
TCAAGCATCATAACCAACATATAATATACACAGCTATACTGATAGCTCAACGCTGCACCA
AATTTGGAGATCCTCTAAGAGTGAGGGAAAATGGCTCCCTTGTGAACAGTAAATTCCAAA
GAAATACTTGGAATTATAAAAAGTCACACATATTTTGGGTCTTTGATAAGCCTGCGAATA
TTTATCGAAAATAAAAAGTTTTGCGTGCTAATTTTTTTCCAAGCCATAAAAAGGGAAACA
AAACATTAATAGCACTAAATCATTTTTTAGTAGGACGCATAGTTAATCCCCCCCCCCACA
CACACACACACAGTAAGGTTTACAAGCACATAAGAATACATTTACATGCATAAAGCATTT
CGATTTATTATTTTCTTTACACCCAGGAGCAGGTGCTCCAGGTTAGAGTTTTGACTTTCC
AATGTTTTAAGAACTTCAACAAGTCATATCCATGCATCATAATAGTTTCATTTGTCAACG
ATAAGCATTGTACGGTATTAGCGAAGTCAGCCCGTACTGGATAACACAAGATGGATGCAA
AAAGTACTGGTAGTACCAGGTTACTAACCTTCCCCTTTAGAACTGGTTTTGTGCTTTGAA
AATCTGCAACAACATGGGCACATGTCAATATGGTCCCATCTGGATCTATTATAGTCCCTG
ATCCAATGCTCTTCTCTAGCACCCATCCATTTTCTACTGAAATAATTGCACAAGTTAACT
ACATGTAGCTAGTGAAACTGGTCATAAGTTTAACGATTTCTGTTGCACCTGCATTCCCAC
CTTGCATACAAGAAATATTCACCACGGCAGGACCAACTGCAGCTGCAGCATTGGCAATTG
AATTTCTGCCTAGACATCCTGGGGAACATCTCGAATCATCTGAGTTTCCACCAGAGCCAT
GGTTGCTCAGGTTTGCGGGTGGAGCAGATGCGCATGCAAAAGAATTTAGTATAGCGAAAT
CCCCTGTACACAGAAATTTGATCACAATGAGCTTTTTTGAAAAGTAAGCTCTTAGTAAAG
AGCAAGATATGGAGGCCATTATTGGGCGAAGAAAAGTGCAACACACAAACATTTATGTGA
CATGTATCATATATGTGCTTGCACATAGTGTTCTAATGTTCAAATGCAGGCCTCCACCAA
ACTGGTCTCCAACTATGTTTATTAATTCATAACATTGTTGAATCCAGAGTCCAGATAACA
CCTCAATTCAGTTAAACCACTCGCTCAGAACAATTGCACGTCCATTAAGAACATTTACTA
CGTACTCTCAAGAAATCATCACCTAATAAGGTAGAAAAGGAAAAGATATATGACGGCGAA
CAAAAAAGGGACTTGGTACCCTAAGACAGCATATAAGAAAATAAACTAAACCAGTCACAT
CGTTTGAGAACAGTTGTGCCCCAAGACAAAATTTATTTTCCAAGAAATGTTGTTACCCTT
TTCCCAGCAAAGAACTTCAATGGTAAATTATGTTTTTAGCAAAATACATAAATATGTTTT
ACCATTTGAAACTGTACATTTGCAAGTCTATATCGATACTCTACAAACAAAAGTATGGGT
TGCGCTGGGAGATTAATCACCTTAACCATCCATAAAACCTGAACTACTATTAAAAAAATC
CTTGTGATTGCTTACTGTGTTATGATTATCTTCATTGCATTCAGAGCTAATTAATCATGT
GTTTTGCTTTTTGCATTTCGTTCGGTTTTATGCATCAAAATTAGAAGCCCCCAAACCCTG
TCTCCACCTCCTCTTATGTCTCTCCACCGCATAATGAACGTCCCTTCCTCTGTCTCCTCA
ACAACAGGATTTAGTGCCAATTTGGGGCAACTAATAACCATCAGCAAGGATGATCTAGTG
TCACTGTTCCAACAAGCGTGTTGTAAAAAAATCTAGCTTAAACTAATAACCATTGGTAGT
TGGCACCACAAAGCATTCGATATACTACTGGTTAGCGAATCGCGAACCAATGACACCCTG
TAACTAGCCCAGGCAAGCAGATGAGGCATCAGCAAACCGAACCTTGCCACGGCGCGAGGA
AGGGGTTGCGGGAGAGGAGCCCCGTGGCGGCGGTGGACAGGAGATGGCGGAGCGGCGCGG
AGGCGGACACGGTGACGGAGTGGCCGCGGTCGTGGAGGCCCCCGGCTCCCGCTGCGGCGG
CGCCCGTGGCGAGGAGGAGGGCGGCGCGGCGCGGGTTGCGGAACATTCTCGAGTGTGCGG
GATCACTTTGGACTGGGAGAAAAAATAAGGTGTATTGTGGACAAAATCTATTTCTACAAA
AGTCTTTCGTCCCGCTTTATATATAAAGCAAACCATCAGTCCAAAAATCTCTCCCTAATA
ATAAAGCGTCTAAGGCTTCTGTCGTCCGTAGTGCCTATTTTACATAAAGGCCCTGATGTT
TGCTAAAATCAACCCGCAGTCTTGTTTTGAGTCAGAAAAACGAATCGTTTTTTTAATGTT
TCAGAAAACCCCTGATATTTCAGGTAATCAACCCGCAGTCCGNNNNNAAGTCAGAAAACG
AATCGTTTTTTGCTTTTCTCAGAAAATCCACTGATGTTTCAGGTAATTAACCCGCCCTCC
ATTTTTAAGTCAGTCAAAACGTTTTTTTTTAACAAAAACAACCCCAACTTTTCAGTTAAT
CAATCCACATTTTATCTAAAACAAAAGTATTCATATCTTTTAAACCGTAACTCCGATTTT
AACA