Map Locations of contig_37584 (7876 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_37584

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_52518 3 1878 bp AK359713 Available Available None





CDS Structure of MLOC_52518






Contig Sequence (7876 bp)

>contig_37584 7876 assembly3_WGSMorex_rbca.fasta
CCCTGTCGCGCAGTGCTCGCGCAGTGCTATATAGAGGAGGTGGGGACCATGGCACATAAT
ACGAGGTTTGCCGCCGCCACTGTTTCCCCACTTCTAACCCTAATCCGATCCAGAGGGAAG
CACTGAAGCGATGGGAAGCCCACCGCCGCCGCTACCATATCTCTCTCCTTCCCCACTGTC
TTCACCACCTCACGATGGACGCTGGAGGGAGCTCATCGAGTGTGGGATAAGGTAATATCC
ACGGCTACTACTGTGACCCATCTAACCTAGAAGATCCACCGGATCTATCAATGGTATCAT
GAGCCACTAGGCATTAGATGCGTTTCGGTTTAAAGACGTAAAGGAAAAAAGTTTCCATCC
CCATTAAGAACCCTAGAAGAGGGCAAAGAACAAGATCAAAAGCAAAAGACAGGTAAAGGG
CCACCGGATTCCTATCCGACAAAGAGCGCCGCCTCGGCCGCGCTTGTTCCCCTCGATCCC
CACACGCATCGGCAAGCCGAGGTGTGGGGAAGAAGAACACCACCCCTCATCGGGGCAAAG
ATTCTACCCCTTCAGGGGCAAAGCACAAGTCGGACTGGATCCGAAAAAGCAAACAAAAAA
AGGAGAGGGAGAAATGCAAAGCACATCCCGAAGGAAAAAGACCCACTAATTGCCGAAAAA
GGAGCAAGGGGCGCCGCGGCCAACCCACTCGACGGCGGCGCGCTCACCACAAGGGAGCGC
GCCACCGGCGAAAGGGGAGGCAACGACGCTGTCAATAGCGCCGGCGAAAGGGGCAGGAAG
AGCCGATGGAGCGCGCGACGCGGGACCCTTAGTCGCCGCTGCCGGCGGCCAGAGCTAGGC
GGGACAGTGCACGAGGCAGCGCGCGGGGGAGGGAACCGCCGGTGGCCGAACCTTCTTCTG
CCTTGAGCTGCTCGAGAAAGAGAGCACAACCGGTGGCCGCAGCATCCCCTGCCTCGAGCT
GCTTGAGGAAAGAAGGCAGAGGAGATCGAGAGGCAAGCGAGCGGCGCGCGGGGAGGCAAC
CGCCGGCGGCCGCCGCTTTTTTGCTCGAGACAGGGAGCTGGCCGAAGGCCTCGCGCACGG
GAGGAGCTGCACTCATGGGAGCAAGCAGCGAGAGGAGGCGAGCGACGTTGGGGGAAGGAA
ATGAGCGATAGGGTTTCCTCCCAGCCCGGCTCGGCCTGGTTTTTGTTCTGGCGATTCCAA
CGGGGGACTGTCAGATACCATGGACGGCCACGATCCCCCCTTCGCCAAACCCTAGCGCCA
GCAGGCCGGTTGGGCCAACCGAAAGTGGAGACGGACCAGGCCGAGGCGGCGGGGTGGTGT
TTGGCCGTCGGCGCAAAGGTGGTGGCCGGCAGGGCGGTTTGGAGCGGCGCGTCGGAGCAG
AGGTGGCCCGTCGATGCGGCTGCGGGACGACACGGATCTAGCTGGTTTTTTCGGCACGAC
GGTCAGGAGGGGCGCGTCGGCGTGGTACTGACTCGTCGGCGCAGCTGCGGGACGGCCCCA
TGTTGGGCGTAGGGCGGCATGGGCGTGTAGGGACGTGGGGCTCGGGCATGGTCTGGTGCA
AGGGGGCGCGAGTACGCAAGGGGCGTGCGATGGCCTCCAGTGTGGTGGACGAGGGGCTCG
GGCATGGTTGGTGTTGCTCGAGTGTTCATGGTGCAATGGTCTTCGACGAGGCGTGCGGCC
AACAAGGGCCCGTGGCTTCGTGCAGCGGGGGCAACATATGTGGTTCTTCGTCCACGGGTA
GGTTTGATAATGATGAGGGTGGTGATGTTTGGTGGGCTTGCCGATGCCAATGCAGGATGA
TGTGTGACTCAGGTGGTGTGGAGCTGGGTGAAAACCATGTCTTGGCCTCGTGCTATGACC
AGCGATGGCAGCGGCTGTGGCCGTCGTTGACCTTCTTGAAGGCATCGTTCCTTCGGTCAT
CCACCCCTCCTGCGCGGATCTGGCCATTTCGATCTGTCCAGGAAAACCTTGATGTGTGAT
TGGACGATGGCGGCGCCTTGGTGTTGTATTCCCTCTTGGGGCTTCTTCTTGGGAGCTTGG
CGTCAGTGAGCGGGACCAGTGGATGACGGTTGGTGGCGGATGTGGCGCCTAGACTTCTGT
GACAACGATGATGGTGGGAGCGATGTCGGCGTTGCAGTAATGGTTGCGGTAGTCGGCTCT
TCTTCGGCGTGTTCATGGTTTTGTCTCGGTTTGTTTGTTGCTATGGAGTCAAAGTTGCGA
CGGTGAGGCCCTGCGGTATACAATGACTGGCTACAGGTAACCCGTTCGGCAATTTCCTGT
GACACCAACCGTGTCTGGTTTTGTCCTTCAGAGTTCTCCGTTAGAGTCGGAGCTGCGTTG
TGTGGCAGTAGGTCGACGTGTCGTCGATAAGAGGGGCTTTGCCGTGTGTGTTTTAGTCAA
TGGGAATGGGCTTAGTCCTTGTTGTATCGGTTTTTGTCCGATTTTCCGTAATTAACTGAA
CATTTTTTTCTTTTGTTTATTTAATAGATAAGACAATCTTTGCCATCGTTTTGGAAAAAA
AAAGTTTCATGGCCCGTACTGGAAGTCAGGAAGCACAGAATGGGGAAGATGTGGGATCCA
GCTTTGATTGCTCCCAGCTGTCCTCCTGTCGGTACAAAAGCCAGCCCCCGAAATTTTACA
TATCTAAACCACACGCGAGAGCTATTTTACCATCTTCATCATCTAAACCGCTGCAAAATC
ACTAAAATCGTAGCATCGAGTTTACATCCAATAAGTTAGGTGGAAGCTTTTAGCTCCAAC
ACTTTGTCGTATGGCACACAATGCAATTCATATACTCCCTCCATTTCTAAATATAAATTT
TTTTTTAAAAAATATATAAATTAAATACGAAGTAAAATGAATGAATGTACATTCTAAAAT
ACATTCATATGTACTCCCTCCATTTCTAAATATAAGTTAGTTTTTTAAAAGGTTTCACTA
GAGGAGTACATATAGATGTATATAGGCATATTTTTCAGTATAAATTCACTCATTTTGTTT
CGCATTTAGTTCCCTGATGAAATCTCTAAAAAAAACTTATAAAATTTCTAAGAAGACTTA
TACTCCCTTCGTTCCTAAATATAAGTCTTTTTAGAGGTTCAAGACTACATATAGATGTAT
ATAGANNNNNNNNNNNNNNNNNNNNNNNNNNTTTTGCTTCGTATGTAGACACCTAATAAA
ATATCTTAAAAGACTTATATTTAGGTACAGAGAGTATTTAGGAACGAAGGGAGTAATCTG
AATTGAAATCTCTAAGGGTTTGTTCGATTAATCCCCGCAAGAAGGGGATTGGAGAGGATT
GAAGGGGATTGAGGTGGAATTTGACTTGCAGGGGATTTAATCCCTCTCAATCCCCTCCAA
ACCCCTTCAATTGGGAAGGAACCGAACAAGCCCTAAAAGGGCTTATATTTAGAAATGAAA
GATGTAGATTTCACAAGGCGCCTCTTCATCTCAGGGCTTTTGGGGCAAAGGTTACAGCAG
ACCTTGGTTTTGCACCTCAAAGTTACAACATTTAGCCCAACATTTTATTGAATGGTACAC
ATTTTGCCCTTCATATAGATCCGCACAGGATGCCTCGTTATCTCGGTGGTAAAGTTACAT
CAGACCAGGTTTCACCTCGACCCATTGTCCACAGACGAACGACAAACTTGCAATTGACAC
CAGAAAGACCAACCTAAGGCAAAATCCAAACAAGCAAAAAAGCTCCTTTTCTCAACTTCT
GGCTGCACGTCTGCGTGCAGCAGATGACTAAAACCCGTCTTACGCTCCTTCTGCTAGGTT
GATAGACCAAAACTGAGCTCAAAATGACTAGAGTACATCAATCCATCAATGGATAGAGCA
ATGTGGCACATGAGACAATGGTAGAAAGGCGGTCACTTCAGTAGCATTTCGGCAATCTGG
ACAGCGTTCAGCGCCGCACCTTTACGTATCTGGTCTCCACAGACAAATAACTCCAACCTG
CCATTGAGGAGCTGATTAGGTTCGAGTATAAAGGGACGATTTAAGCACAAGCGATGCATC
ACAAACAGATGGTTACGAAGTAACTGTTAAACATGAGTATTACCCTCTGTTATCATCTTG
CGACAAGTCCTGACGGATCCTGCCAACTGATACATCATCTTTATCCGATACCTGAAAATC
AGGGTTGTATTAGAATAAAAGAAAATCTGCTCTACTTTTCTAACTAATTAGGCTAGTACA
GCTCCGTGAAACGGTGTATGGTTAGTAAATAACAAATCTCCTGTCTTTGAGATCGCAAGG
AATCTCATGGGTGGAATGTGCATGAATAAAAACAAGGAAATCACCAGTCTAAATATGTAC
ATTTTCAGAAAATGAAACTGCCTGGTTACCTCCAGTGGTGTAGGGAAGCGATTGGCAGCA
CGGTCGTCGCTAATGGTAACACCAGGAGCTGCCCTCAAGATTTCTCTGGCAGTGTCCTTC
AAGAACATATGCAAACAATTTCAGAACTTGAACAACAATCATTAAGAAGAACAGAGGATC
ATCTCATAAGGTGTGTTGTTTTTGTTTGACATGGAACAAGAAATGGAAATTGTAGTAAGT
GTCAAAAGTGTTGTAACATTCTTACAATGTGAAATTTAATTAAATGGCATACCCAACAAT
GACAACGGACAAATTCCACAAGAAACAATATACAATTCTACTTACCAAAAACAATGGAAA
CAAAACAATGCTAGGCCAATAAACATATTACTTATCCAGTGACTCTGGGTCTGAGATTGC
AACAGTTCAGAGAAGAAGTCTATATACTAACTGATATATAACTCAATTATAGTATGCTAA
CCTCATCAAGTGGCTTTTCAAACTGTAGATTCACACTTTCGGCATGTGCACGCATCGTAG
GAACCCGTATACAAGTTGCAGTTACTCGTACATCCTTGTCATTCTAGAAATAGAGCAGAG
AGTTAGTATGGCATTTCTGTCTGCTCAACAGTCAAGTCAAGAGAAAAGTTCGATGGAGCA
ATGCAAAGAACTTATGGGGCATTGATCAAGCTTTCACTTACCCAGATTTTTCTGGTTTCC
TTCACCATTTTCATCTCTTCCTCGTTATAGCCATTTTCAACAATAGGTGCATTATGCGAA
AATATATTAAAAGCATACTGCAGAAGGAAAAATACATTCAGCATGTCTCATGACAGTAAA
GAATAAACTCAACATGTGCACAAGGTATTTTAGTTATAACCTGTTGACTGAAAATGTTGC
AGGTTGGTGGCTTTCCTTCCAAGACCTAAATAAAGTATACAATGTCAATAGCTAAACTGA
ATTTAGCACCGCGAGGAAGATAGCAAGGGAGAAAAGCCCACCTCTTGAGTCTGAAGTTTG
AGTTCTTCCATGGCTGCAGCACCAGCACCACTTGCTGCTTGGTATGTGCTGACAACCATC
CTTTTGACCTGTCACGTTGACGATCGGAAGATTGCATCAGTTTATTTGGCAGTCCATAAA
TGCACCCAACAAGCATACTTTTACATGACACATCGGTAATTATATTATAAAATACCCGTG
TCACGGTAAAAACTATGCTAATATATGAATCAGATCAGCACACATAAATAGGTATAACTA
ATCATGCATAATCAGGACAAAGGCAATTGACAAGCTTCATGAAATTCATGAAACACTACT
AAGTAAAAAAACGTCTTGTATTTAGTGACAGAGGGAGTGTCTACCAAATTGCAATGTCCG
TAGCTTAAAAGGCATCACAGTTATGGGAAAGGCAATGAAATGTGTGGAATTAAATCTGCC
TATGAAGAAGCATGTCTAATACCAAAGATGAGTCTAGTTTTTATTTCAGGACTCGAATTT
GCAGACTTCGATTTTCTTTGGTCACGAGTATCCCTTGTTTCAAACTATTTTAACATTAGC
TTCAAGTGTTAGTGTTAGACGAAAGCAGGGGACGAAAGGCAACATTTGTGCTGTGCAATG
GCACCTTGGCGTGGCGATGCAGAGGCGTGACAGCCATGAGGCAGATGATGGTAGAGCAGT
TGGGGTTGGCCACGATAGCCCCTTTCCCGAGCCGGACGTCGGCCATGGCCTCGGGGTTGA
CCTCCGGGATGACGAGCGGCACGTCGGGGTCCATCCGGTAGGCGGAGCTGTTGTCCACGA
CGACGGCACCGCTGGCGACGGCGGCTGGCGCGTGTGCGCGGCTGACGCCGCCACCGGCGC
TGAAGAGCGCGATGTCGATCCCCTCGAATGCCCCGGGCGCCGCGAGGTCCTGGACGGTGT
AGTCCTGGCCCTCGAACTCGATGCGCTTGCCCGCGGAGCGCTCGCTGGCGAGGAGGCGGA
GGCTGCGGTAGGGGAAGTCGCGGGCTGTGATGACGCGGAGGAACTCCTGCCCCACGGCGC
CGGTGGCGCCCACGATGGCCACGGACGGGCCGTCCTCGCGGAGCGCCATGCGGACCGTGG
AGGGCCGCCGGCTGGCGCGGGCCCCCAGCGGGGACGCCGCCAGGAGGTGCGGCCGGTGGA
CGGCGGCGGTGGCCTGCATTGCGGCGGCGGCCTAGGGTTTTAGGGAGGCTGGGATTTGGG
TAGGTGGGTGGTGGGAGAGGGATTGGGTGGGGTTTCTCTCTGGATTTTTGTTTTGTGGAC
GCGCACCGGGAGGGGAGGGGAGGGGAAGGGGAGGGGATCGTGCGCGGATGCCCGTTCTGC
CCAAATTGGTGTTTGCTTGCTGCTGCCAAGCCAGTGGAAAGTGGAAACAGTGTGCCGTGC
CCACGGCCACGGGCCACGGGACAGCGGAATGCAATGCTTTCGAATTTTGATCATGTTCTA
ACAGTCCAACTCGGGGACAGAGTACGATTTTTTAAAACTTAAACACGGTGCAGAAGTTCG
TACATACTCATATACAATCATCTTTTTGAATGCACCGACACACACCCCGGTGTCAATGTA
AACTAAGTCGGCACATCATCTTGGATGTGTTTGCTTACGTGCATTGTTTTTTTTGTCCAT
TTGCATGTTTTTTCAGTTGGGTCTGGTTGAGCATATAAAGGCATAAAACCAACATCCACA
TGTTGATTGGTTGTGTATGTTTATATTTTAGGTGTAAGCAGATGCAAAGCATAACTGTTT
AATTATGTGTATGTACTTGATCTGCTCACTCTTTTTAAATATGATGGACTTACCATTCAT
TTTTGACACACGACACACTATAATCAACAACAGCAGAAAGAACATCAAGAACAAAGCAAA
GCATCAAGAACAGACAGTTAATAAGTAGTATTGGTTATAAGATTAAAACAACACGGCATC
CATGCTCCTGTTGGACCCGAGGATGCTGATCTCTGGGTAAAATATGGACATGTTCACATC
AAAACAGACATTCACACTTAAGTTTAGACCTACATTAGTTCAGTTCAGGCTAGACAGAAA
TACATGGCATGCATGATGTCACCGACGCAATTATGCTTGGAGCATCGGACCCTGCAGATG
TTGGAGGTGCCAGCGTTGAAGATCTGCACCTTCAGCCCCAAGCTGGAGAGCGTGAAGACT
ACGAGGTCGTCGGGAACGGTCTTGTGTCGGCGAGAGAAGTACTTCCACACGCGCCCGAGA
ATCATGTGCCCCTTGAACATCTACCTAGAGTTGACACTCTTTCACACCCACTTTCATCAA
TATAATCATCATAAATATCAGGCATGCTTTCATCATAATAAATTTGCTCATCAAAACTTG
GAGGACTAAAAATATCATCTTCATCAAACATAACATCCTTGAGCTTGTGGCTTTGCATAT
CATTAGCATCATGGATATTCAAAAAATTTATACTAACAATATTACTATCATGCTCATCAT
TCAAGGATTCACATTAAGCATTTTTATAAATTCTTCCTCTAACAATTGAGCATAATTTTT
TGAACCATCATTTTCA