Contig Data
morexGenes
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Map Locations of contig_37581 (4785 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_37581

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_52515 3 2184 bp MLOC_52515.2 Available Available LOC_Os03g03720.1, FRAME:-3, EVALUE:0.0, 13103.m00369 protein glyceraldehyde-3-phosphate dehydrogenase, putative, expressed





CDS Structure of MLOC_52515






Contig Sequence (4785 bp)

>contig_37581 4785 assembly3_WGSMorex_rbca.fasta
CCCGTCGGTGGCCAACCTAGGCGGCGGCGCCATGGATCCCGTCGGTGGCCAACCTAGGTG
GCCGTTGCGCCATAGATCCTATCGATGGCCACTGGAAGGAGGCTAGCGGGGGCTACAACA
GCGGTGGTCGGTGCCCAACCTTGGCGCCTGTCGTGTGGACAAGGTCGTGGTGGCCGCGGT
CGCACCGAGGTCGCTGGATCGGACTCCAATGCCACAAACGAGCTCATCATCCTTCTCTCA
TTCGACGGCTCCGTTTCCATTTGCTCCGGCGAGCTCATCCTCTTTTTTTTATGATCCGGC
GAGCTCATCTTCCTCCTAGAGAGTGCGGCTTCTAAGCATTGGCATGATGTAATTAGCTAG
GGATTTAACTAGTGATTGTGGACTAATGTGTAATTAGTTGTACTCGTATGTGGGACTACC
ATGTTTTGTGTTAATGAATGCTATTTTGATTGATTAATATTGTGTTAATAATTGTATGAA
AATGTTATGGGAAATAGATGTGGTGTTTAAAAAATGTCAGTGTCCATTAGATATTTGGTT
TTGTTCATCACGGGCTCACACATGCTAGTGAGATGAGAGAGGGATGGTTTCCTCAATGAT
TGGTCCTACTTGGGAGTGCCTTGGCATAGTGTGAAGAAGCACGGGCAAAATGGTCTAAAG
AAAAGTCCACAGATAGTCAACACACGGTCAAACGACACTAACCGGATGAAATTGAGATGG
AAGGGCAAAAACATAATACTAGCAAAGTGGTTTGGACAGAAACGAGTGTTTTTGAAAACT
AGGTGTAAAAATGTCGAGTGTGACCCAACTAAGGACATAAATTCAATTATCCCTTTTTAA
GTTATTCATTTCATTTTCTTTCTTATTAAAGTGTAGTGCCAATGCCACTAATCCATTCTT
ACTTGGAAACCTTCATTATTTTGATTTTGATTTTGATTCCTTTTTATGGGTAATACCAAC
TCCACTAATTCATCCCTTCTTAAGAAACTTCTTTTTTGTGTGTGTGTGTGTGCAAAAATC
CCAGGATGTATATATAGATCATTCATCACCAGTTTTGAGAGAGAGAGATTTGATGGAAAA
CTTGCCATCAGGAGTAAGCATCCATCTTACACGATCTTTAGACATTCGATCCAAGCATCT
CAAAGCGCATGCTATACAAAACTTGGCACAAGAACACTTTGAAAGTCCCAAGAGAAAGTC
TGACATATCTGAATATATCGAGTTCAGTACAGCTCACAGAAGAAGGGTCAATTTATTCTG
CCCGAATCCTGTCTGATATATAGAGCACCAAGCCGCAAGCTCGGCGAGCAATCTCGAAAC
GAATGAAACACAATCCAGCAGGTCCATATTATAGGCTATAGATAGAGGATAATAATGTAC
TGTAGTTGCTTCGTTGCGTTTTCTGATCAGCCTCGACCGGTCAAGCCAGCAACCAGCTCC
GAGCTCCGTTCACTCGTCGAACACCTTGCACTCCACGGCGTTGGGGTCGGTCTTGCAGTA
GTCCTCCAGGGGGTCGCCGCTGCCGCCGGTCCCGGCGCCCGGCCACTTGGCCGCCACCAG
GTGCGCCAGATCAACCACGCGCTGGCTGCACACGCACACACCAAAAACCACTCACAGGTT
AACATCATGTTTACAGATGCATGCATGCATGTAATTTCGCCGTTAACGATCTCGCCGCCG
GCCGGCCGTGGCTCACCTGTAGCCCCACTCGTTGTCGTACCAGGCGACGACCTTGACCAT
GTCGTCGCCCATGACCATGGTGAGGGAGGCGTCGATGCTGGTGGACACGTCTGAGCAGCG
GAAGTCGACGGACACGAGCGGCTCGTCGCAGACGTCGAGGATGCCCTTGAGCGGCCCGTC
GGCGGCCTTGCGGAACGCCGCGTTCACGTCGTCGGCGGTGATGCCGGTCTTGACGGTGTT
GATGACGAGGTCCACCACGGAGACGTTGGGCGTGGGCACGCGGAGCGCGATGCCGTTGAG
CTTGCCCTTGAGCTGTGGCAGCACCAGGGAGACGGCCTTGGCGGCTCCCGTGCTCGTCGG
CACGATGTTCAGCGCCGCCGCCCTCGCCCTCCGCAGGTCGCGGTGGGACGCGTCCAGCAG
CCTCTGGTCGCCCGTGTACGAGTGCGTCGTGGTCATGGTTCCCTTCACGATTCCTGCACG
CGCGCAACCACGGAGCAGTCAGAACTTGTTCTGATCAAGGTGAAAAAAAGGGTGACAAAC
AGTCAGGTTCTTACCGAACTCCTCGTCCAGGACCTTGGCGAATGGCGCGAGGCAGTTGGT
GGTGCAAGAAGCGTTGCTGCAAGGAACAACAGAGTTTGATCAATTTGCTCCATGATCACT
CCATCTCCATGCATGAGTCGCTGACTGGAGTACAAAAAGTACCTGATGATGTTGGCAACA
TCATGGTCGTAGTCGCCCTCGTTGACACCGACGACGTAGGTGGGGATGTCGGCACCCTTG
GCCGGAGCAGTGATGATGACCTTCTTGGCTCCGGCCTGGAGATGCTTCCCGGCGCCGGGG
CCGTCAACGAAAACTCCGGTACCCTTCAACACAGGACACGAGCAGGACGCGTTCAGTTTT
CGTTTGCCGTACGTGCGATGTTCATAGTAGCAATGGGGTTTAGTTTTACTACCTCGATGA
CGATGTCGATGCCGAGCTCGGCCCATGGCAGCTTGAGGGGGTCCCTGTTGGAGACGACCT
GGATGTTCTTGCCGTCGACGCTGATGGTCTCGTTGTCCACGATCTTCACGTCCGCCTTGA
AGGTGCCCAGCATCGAGTCGTACTTGAGCAGGTGAGACGCCTGCAACCAAACCACACGAC
CCGGCCGACCATGTTCATCATTTCGGAACTGCTGCCCTGCTCCTCTACAGTCTACAGTAC
GTTGTTACGAATATACTTACGTTCCTGACGCCTCCGCTGTCGTTGATGACGATGACCTCG
AGCGGGGAGTTCTCGCGTCCGTGCCAGCACCGGAGGAAGTTGCGCCCGATGCGGCCGAAC
CCGTTGATGGCCACCTTCAGCTTCGCCTCCGCCGGCGCCCTCACGGCGTTCTCGCCGGAA
GCCTGCCACGATCAACGACCTGTTAGGACGGACACCCTACATACACTACACACCGATCGA
TCTGCTGTAGCTGTGGACAAGGTACGTACCCTGGCGACGAGCTGCGCGCCGAGGACATCG
GAGAAGGAGGCCTCCCTGGCGGCGGCGCTCACGGAGCACGACCCAGGCCTCAGACCGGAG
AAGTCGGCGAAGTCGACCCTCTGCCTGGAGGCGGCCTTGCTGTGCAGACGGGCACTGGCG
GGGATGCGGGTGGCGGCGAGAGCTGCATGGGCGGCCATTGTTGACGATGCTGCTGCTGCT
GCTAGGCGGAAAGGAGCAGGTGGTGCGCCGGCTTATTTATGTGGCCGGCGATCGATCGGG
GAAGGAGGCGGCGTGATCACTGCTTGGGTTTGTGGCGTTGGGACGGGCGGGGGATAAGGC
GATTGCATGCGCCGCAGCCACCCGTTCGGGCCGGGCGATATCCTCACCGGTTTGCCTGTG
GACTGTGATGCGAGTCGGCGAGAAGGTGGGGTGTCCACGACGTGCGTAGGGCTGGTGTTT
CCCTTGGACCTTTTGATCGGGTTATCCAGCTTCTTTTGGAGCCGTCGGTATGCAGACAGC
AGATATTATTTGATCCAGTGATCAACAACCACGGGACAAGGGGAATGGGACGGGTTAGTA
GCACACCTATGCTCCCTCAGTGTTTCGAAGGTCCTCATAAAGATAGGAAGCTTTCGTCGT
AGGCAGGGCCAAACATATATATGCCCTTCTCTTCATTGCTTTCCTGAAATGCGTAAGTAA
TCACCTTCGAAATGGTACCAAAAGGCCGGCTCAAATCGTCTATCACATCCTGATGGAACC
TATTCTTCGACTATACTTCTTCCTTCGACTAGCGTGCTTAGATAAAATACAATGATACCT
ATATCGCTCTTTGTTGAAATTGTAGTTTAGGTGGACTATATGCCTTTACATCTTCTCTGG
CCGATCGGGGTCTCCAAAGTAAGCAAAAAAAGGAGTATTGACAGCTATCTTATGTTGTTT
GTCGAGATTCATAGTGTATGTGTGTGTATATGAACGTTTGCGTTTGTACTGTCTTAAAAA
AACTTTCTGATTTTCAAGTCAAAACCTTTTATTTTATAGGACTGGATAACGTACGTGTTT
TTCTTACTAAAATAAAAAAAATATAGGAAAAAAACTTTTAATCTATTCATCAAAGTAAAA
AAACATCAAAAGTAAAAAATACATCCAAATCTATAGACCAATTAGAGACGACTACAAACA
CTAACATCTATGAGTACGACACAAACCTTAACAAAACTAAAAAAAATCAGAAAACAGAGC
CCTTCCGTCGGCAAGGGTCGTGATCCACCGCGCATCCATGGTCCTGAGACCACAGGAGAC
GAGGTAGGCCGGCGCCGGCAGGAGGCAGGAGAAACCCTATCACAGGGTGCACGGTACAAA
CGGTCATGTGTGGTGTCCTTACGGTGTTACTAGTTGCTCCACAACGTATCTTAATTGTCA
ACCGGTATTTTTTTTCTTTTGAATTGTTTGTGTTGCTTACCATGTATTGTTGGAATTATG
CCCTAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNAATTGTATTGAAAGAAGACTTATATACATGTGCGGATANNNNNNNAA
AACACTGTCCCTAGCAAGCCGCTAGTTGGCTAGCCAGTTGATCCA