Contig Data
morexGenes
Links



Map Locations of contig_37557 (4477 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_37557

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_52485 4 3587 bp MLOC_52485.4 Available Available LOC_Os05g48370.1, FRAME:+1, EVALUE:0.0, 13105.m05144 protein expressed protein





CDS Structure of MLOC_52485






Contig Sequence (4477 bp)

>contig_37557 4477 assembly3_WGSMorex_rbca.fasta
CGCACCCCCCGCCCCGCGCTCCCCCCCCGCCGCGCCCCCCCCCCGCGGGTCCGCCCGCCC
GCCCCCCCCCCCCCCCGGCCCCCGCGCTCCAGCTCTCCTCCGGCTACTTCTCGGGCGGCG
GGGACCGCCTCTTCGGCCCGGACGCCGCCCGCCTCCCGCGCTCCTTCGCGCTGCTCCCCA
CCTCCGTCCTTCGCACCGCCGACGCCTCCATCCTCCGCGTCTCCGCCACGCTCTCCTTCT
CCGGCGGCGGCCGCCGCCGCGTCTGGCCTCCCCAAGGCGGCCGCAACCGCCGCCTCTTCG
ACTACGACGGCCAGTCGCACCGCTTCCGCCCGCGCCTCCCGCGCTTCGTCGGCCGCCGCG
GCTCCCTCGTCTTCGACCTCGACGGCTACTACTCCTCCGCCACCGGGGACCTCTGCATGG
TCGGCTCGGGCTCCGGCCGCGCCGCCGACGGGCGCCCTGTCGCCCTCCTCCCCGCCGTGC
TCCGCCTCCGCTTCCCCAGCCCCGCCAACCTCACCAGCCCCTTCGTCACCGGCCATCTCC
AGAGCACCGGCCCCGGCCCTGGCCTGTCCTTCGACCCCGTCTCGCTCCTCGCCTACGCCG
AGGAGGGGTACGCCTACGCCGAGAGCGCCTCTTGCCCTCGCCCGCCCGCCGACGGCCGCG
ACGTCCGCCAGCTGTTCGGCGGGAGGGACTTCACGTGCCCCGGCCTCATGTCGCTGCTCA
AGTCCGGGTTTAGGCTGGACTACGGCAACGGCGGCATGTCGGCCGCCTCCTCGCTGGGGA
TTCATCAGACGTACATGTTCGTCAACAGGGTGCACTGCTCGGCCGACGGCGCTGTGCGTG
CCTATGTGGCCTTCTCCAACACGTCAGATTTGTCCAAGTTTTACTTGATGGTCACCGAGA
AGGCGATTGTGGCAGAGGGTTTCTGGGATCAGAATGCTAACCGGCTTTGTCTGAAAGGAT
GCCATGTCGTAAACTCAGGATCATCCCGTGCAGAATTGGCGGTCGGCGAGTGTGGGATTG
GGATGACCTTCTGGTTCCCTGGAGTGTGGTCGATCCAGGAGCGGAGCTTTTCTGCAGGGT
CGGTCTGGAACACCAGCCTCAAAGGCGACGAGGGCATTGCCGGATATTCAACTGCAATCA
GGGGTAACTTTGCCGGTTTGAAGTACAACTACACTAAGGTTGATGAGGCAATCAAGTATT
ACAAGCAGTATGGCCTGAACAAGAAGAGGAAGGGCAAGTTCCCAGATAGCAACACGTATC
TAGACTTGGTGTTCCGGTTCCACTTGAAGAAAGGAGGTGGTTCTGGATACGCGTCACCGA
TCACAATCGGGTCAGTGTTCTCTGATGGGTACTCTTTTGTGCTCTCAAACCTTTCCACTC
GCCCTGCAGTGCTGGAGAAGGAGAGGCTACTTAAGGTCAGCTATAATATCCGCTATGTTG
GGAATTGGTCACTAGAAACATTTCAGCGTCAGCATATTTCGGCGGAAGGTGTCTATGACA
CCGAGACAGGCTCCTTGTGCCTGATCGCGTGTCGGGGGGCTAATGTCTCCTCCTCAGACT
GTAAGATTCTGATAACTGCTCGCTTTGCTAGTTTGGACTCGAAAGCAACACAGCATGTTC
AGGGGGAAATTAGAAGCTTGAGGGACAAGGCTGATCCTCTTTTCTTTGAAACACTGGAAA
TTTCTTCATATGGGATGTACATAGGCCAAGTGGAAGACTCAATATGGAGAATGGACTTGG
AAAGCACCATGGCCCTGATCTCAATGACGTTATCGTGTGCTTTCATTGCTGTGCAGCTGT
TCCATGTCAAGAAGGTCCCTGAAGCGCTTCCTGCCATGTCGATCACTATGCTTGTCGTGC
TCGCTCTGGGTTACATGACTCCTCTCGTGCTCAACTTTGAGGCTCTTTTCAAGCACAGCA
ACAAACAGCCTGTTCTGTTCTCGGGTGGTGGTTGGCTTGAGGTGAATGAGGTCATGGTGC
GGATCATCACAATGGCGACGTTTCTGCTGCAGCTGCGCCTTCTTCAGTTGGCATGGTCTG
CGCGGTCTTCTGTGGATGGAAACAAACATGAGGCATGGGCTGCAGAGAGGAAAGTGCTCT
GGATATGCTTGCCGCTGTACATCATAGGTGGAGTAGTAACTTTGGTCGTCCACATGATGA
CCAACCACAGCAGTAGAAGGATGCTGAGGCAAGTTGCCCGCTTAATGCCGCCACGACATA
CATTCTGGGAGGACATTGTCCCTTACGGGGGCTTAATGCTCGACGGGTTCTTGCTCCCAC
AGGTCATCTTGAATGCATTCTCAGCCTCCAAAGTCAGAGCCCTTTCCCCACTGTTTTACA
TTGGAGGCACCATGCTGCGAGCGCTGCCTCACGCGTACGATGCGTACAGGACTCATCACT
TTGTGCGCAGCATGAGGCCATCTTACATGTACGCAAGCTCTCGTGACGACCTCTTCAGCC
TCGCATGGGACATCGTCATACCTTGTGGTGCGATCCTGCTGGCGACGCTCCTGTTCTTTC
AGCAGTGGCTCGGGGGCGCCTTCTTCCTCTGCTCCAAGAGCAGGAAGCCGTCGAGCGAAT
ACGAGATGGTTTCCACGGTCAGCTCTTAGCAAGTTCCTACAGCTTCGTCGCAAGATGATT
AAATGAATGTAGAGGAGGGGTTTACATATAGATTGAGGCATATTGTTTTTCCTGTTTCCT
GATGGATGAATATCTACCTTACATTTGCGGCCTGTTTGGGGTGAAAACTTATACATACAT
GCATGTATACGGCAGAAGGAAACAAAGATCAGGCAAGGTTCGCAGTTCCTTTTCCTATTG
CCGTAATCCGGTTTATGGTTTATCCTCGTTATTCTGGTATTCAGTCAAGGCTATCTAAGC
CCAGGTGGATTTTCGGTCTGTGAATTCGTTGGAGTTTATCTGCATCTGTTCTTTCTGCGA
GCTCTGGGTCTTCGTGTGTATGCTATGTAGTGTATGCATCTGAGACCTGTCTGTCTGTTT
TCCTACTCACCCATATACAGTAGTTTCTTGACTCGTTGCTCCATGTGAGATGCATATTCA
GCTCTACATATGATTAGTTTGGATAATGCCATTGTGACAGTTTTAAATAGTCGAAGTAAA
GCACATACCCCTATTCAATCAGTTCAAACATATTCAAGATAGTTGTTATATTGGAGATAC
TTGTTGTTGGTGGTATATTATTAAGAGGGACAAACATATCCCCCCCACATAAAAAGTGCG
CAAATGGGATAAAAAACAAATGTATGGTAGTTGCGTATTGATCGCAAAACCTGCATTTAC
CGTTCCAGTTTTTGCTTGTTGAAATTGTCTTGTAAAAAGACTTGCCAGGTAGTGAGCTCT
TCCTTCTTATGATCTTTCTTACTAATAAACCTGCTCTTGGTACTAAATTTTCTGGTCAGT
ATCTTGCTGTAATTACTTCAAGTGTCCCTTATAATGAAATGTCCTTTCCCAGGTCAATTT
TGGTATTCACCCAGGGCTAGCTAGCCCAGGTGGATTTTATGTCGGCGAATTCGTTGGAAG
TAATCTGCATCTGTTTATTTCTGTGAGCTCTGCGTTTCTGTGTGTGTTTGCTGTGTAGTG
TGCGCATATCACACCTGTTTGTTTGTACTGTTTTTCTACTCACCTGTAGTTTCTTGATTC
AGTTGGTTCATGTGAGACTGCCTATTCAGCTCTGCACATGCATTGGTTTGGATACTGTCA
TTGCGATGGTTTCAAACAGTCTAACACAAACCACATGCCACACAATTCAATCAGTTCAAA
CAAATTCGAGATACTTGTTGGTGCTGCTATATGAAGAGCCAAAAACAGAGCCCGCCATAG
AAACGTGCAAATGGGAATATAAAAAAAAAAATATGCATAGAAGTTCCGTTCCATCTTGAT
GCAAAATCTGCATCATCTTACAAGCATTCCGATTTTGGCTTTGTCCAGTGTGTTAAAAGC
CACCGCTTGATGTAGACACCAAATAGAGATATTGATTTTTGAAGGGATGGTTGAGCTTTC
AAATAAATAAAGATATAGGTTTCGACACACACAAAAAAGAGAGGAAGAGAAGAATGAAGT
TCTGTTGACAATACACTAGTATATCTCTATTTGATAGCCATGATTCCTCTCCTGGATCTC
GAATTCGAATTACAAGGATAAGAATGGAGAGAGGAGGAAGAGATACAACTCTCTAATGAT
ATTTTCCTTCCCTATTTAACAGAGCCTGTGGCCCACTCCTTGGCTGCGTAGCGAGTGGGC
GGGCGCCGAATCCTCTTGCTTGGTCCACTGTCAGCGACGGAGGTCGAAGCTTTGGCGACA
TGAAGTAGTCGAATTTTTGTCCAAAAGGACCATCTCTCGAAACGATTTGCTAAAAAGAAC
CACATACGGTATCCAAAGACAAAAAAGACCCCTCCTCGCATGGCGGCAGGCGCGCCAGGC
GACATGTGGCACCTGCCGCCGCCAGCCGAGGCGGCTG