Contig Data
morexGenes
Links



Map Locations of contig_37548 (4871 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_37548

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_52470 1 294 bp MLOC_52470.1 Available Available None
MLOC_52471 3 1215 bp MLOC_52471.1 Available Available LOC_Os12g39370.2, FRAME:-1, EVALUE:7e-65, 13112.m04074 protein expressed protein





CDS Structure of MLOC_52470






CDS Structure of MLOC_52471






Contig Sequence (4871 bp)

>contig_37548 4871 assembly3_WGSMorex_rbca.fasta
CGCGGCGTCGGCGGCCGAGGCGCCCGCCGCCCCCTCGGCGACGACCGAGTATGCGCTGCT
GTACCCGGTCCTCAACTCCAACGCCGCCGGCGCGCGGGCCGTGTTCATCCCCACCGGCGA
CATGCTGCTCTCCACGCCCCTGGCAATGGCGCACGGCCACCGGTGCCAGCAGAGCGACGA
CGAGAACGACTCGGACATTGACCTGGAGCTGCGCCTCGGGTGGCCGTGAACGGGAGGGAC
GTGCCCGCGTTTTGCTAGTTGCTTCGTGACGTGTGATTCTTTATTCGTCTTCGAGTTCGA
GTCATTTTTGCATCGAATGAATAATGGCATAAGATTACCCGACAACGACAAAGCCTCCAA
ACTGGAGACGACGACGAGAGGGGAAGAAAAAAGGGTGCAAAGTACAAAATATATACCAGG
TCGTATAATATATATATGGGCTTCGGCGCCTCGATTGATCACAGATTTGATTTCAATCAC
CATCTTGTCATTTTCGCCGGCAGGGTTTAGGGGGTATATATTTTCCCGACAGTTAAGATG
TGACACCGAGGAGTTCTGTCTCAGGATGCCCATCTAGAGGCCAAAGTAGTCCATGGATTT
TTTCAATTTGTTTTGGTTTTCTTAATCTACGATGAAGTGACATTACATTGCATCGACAAA
CTTGCAGATTTTCATGTTGGTTTCATTATAGGGGATACCAAATTCAGACACAACATGTAT
GAAGCAACACTAGCTACAACACAAAGGATTGCAAATCATATGCAAATTACTCCCTCTGTT
CCTAAATANNNNNNNNNNNNNNGATTTCACTATAGACTACATACGAAGAAAAATAAATGA
CTCTACACTCTAAAATGTGTCTTTATACATCCGTATGTAGTTCATAATGAAATCTCTAAA
AGGTCTTATATTTAGGAACGGAGGGAGTAGAACCCAACTCATCTACCTAATGCAGGTCCA
AACCGCTAATCCACATATACTGAACTCTAGATGTCAAATTTTCATCATTCGTTCCGGACA
ATCCTACCAAGGTTACTGGTACAGTACACAGTGGATTCAGTTAATCATACGCCACACAGC
TATTTTGGCCACCAATTCTAAATTTTACAATCTCCATGGAAGTTTTGGAGCTGACGCAGC
AGCGGAGTATACAACAATACATCTTGAACACCAAGAAAATGTCCAAGGAAATGGAATTTC
TAGTTGATATCATTCTGATGCCATCAGTTGATTTCTTCTCAGACAGTTTAAAACACGCAG
ACCATTGCCTACTACTAGTAAGTACTACTCCCTCCGTCCCAAAATAATTGTCTCAAACTT
AGTACAAATTTGCATTAGAGTTAGCACAAAGTTAAGACACTTATTTTGGGACGGATGGAG
TAGTACACAATAGATTCAAAGAATCACATGCCACTCAACTGATTAGACCACCGGTTCTAA
ATCAATCAATTTTCATATAAGTTTTGGAGCTGATGCGGTGAAGAGTATACAGAACTACAG
CAACAACAGCTGAACACGGGAAAAATCTCCAAGGACCTAGTTGCAATCATTTTGGCTGTG
CCCGTTAGTTGAATAGAGTGCCATCAGCTTGCCCGCCGAAATATTACCTGTAGTTTCAGT
TCCTTAAGGTTCATCGTTGACTACAGTTTTCGATTCAGATGTCTGCACTATATGAATTCC
AGGGTCAGTGACTCACCTGGCAATGCTGCTACTCACACGATATGATCATTATATTGCACT
TTCTCCTTGCACAAAACCCTGTTCACTCAAGTTTTCCTCCAAAACTCCATTATCATCCAG
TGTTGACATTTCAATCTGCAAAGTTAAGTGAAAATTCTATTAATTTTCATACAGCAACTT
AACAAAATAGCACTCATAAGCAATAACATTGAACAAATTTAAAACTGAATTTCATTGATT
CATACTTCCAGCACTAGCATAGACTATGTGTAAATTTTAAATTTCAACTAGTATCATTTG
AAGAGCCTTTACATTAACTTGTACATTTGAGAGTACAAAGTGCAAGCGAAAGCACTTTGT
TTGCAAAGAAATATTAATTTACATATTATACAGAAAATATAGCACTGTAAAGGTTCTATA
ATGGTTCTACTTCGGTTTCATCTTTAACAGCCTCTTTTTCGACACTGCCAGTGACACGCT
TCAATCGGGCGGCAGCTTTGTCAATCGCAAGGTTCAGTTGGCTTATCTTGTCACCCAGTG
TCTGACGAGTTTTCTGGACAAATCCACAGATATTTGGTTGTCAAAATAATACCTTTTAAT
CTTTCACATACAGAAGTCTGGAAATATGTCACTGCATTTGGCTCCTTACCTCTAAACCTT
CATCATAGTATTGAGCATTACGTGGCCTTGGTACACTTTGGAAGCCTTGCTCGTCAGGCT
TACCATCTTGCTCATCGTCATTCAGCAATGTATCTAAAGTTTTGCTGATCTGCTCAAGGA
GGTTAAGTTGTTAATAAAAGTCCTCCGATGGAAAATTGCCAATAGAACAAGCCAAGTAGA
TAACAGACTGGAGCATGGGACCAGGGCCACTGGGCCAGTCATACACCTGTCTACCAAGCG
TTAACCTGGCATCAGAGACAGAAGCAGCAACTGATGCGGATTACTAGAGAACTAGGACTC
CTTTCCCTTGCCCATTAAGCTAGGAGTTGGATTTTCAAATATTTGAATCAGGCCAAGACA
TATTAAATTAGTTGGATTTTAGGTTTTCTTCATTACTTCTTACTTGCAGCCTGGTATGTG
AGGGGTTGAATAATCAAATAGGGGAAGCAAGATCTGGAAAGATCACCCGTGTTCCTTCCC
TCCCTTTCTCTTGCGGCGGCAGGGACACACCTGGCCTCTGCAGAACGCCACAACAGTGCA
CAAGTGCTAACCTGCTCCTTCTCATTCCTATTTTTCTTTACTTCCGCTCAAGACCATAAC
AAGCATCTAGACTAAAATTAATGTGTACCACGTATATACAGAAACTTGCATCATGCTTGG
TTAAGAGTTCCAGTATTACATGTGGACTTTGAGCTTGTTGAGATCACAACTTTTTTGTTT
GTTCTTCTGTAGGACACCAGATGCTGTAACTTCTACTATTTGCTAGTCAGAGCATTGTTA
ATTAATGCATGATGGTTCTATATTCCCTTTCTGAAGTTGCACACGTGACAATGAAGAATA
GTCCAAAGGTTCGATAATACCTGAGGAGCAAAGACATAACCCAGTGTTCCAAAGACTGCT
CCCCCTATAAGAAATCCAGTCAAGAATCCTCCCCCGCCTTTAGAATCTTCACTGCGAAAT
CACATCACAGAAGGCAAAATTTCAGAAAAGCATACAGCATGCGGGAGAAAACATATCACG
GTACTGTAATGACTACAAGATATCAAAACATAGCAAAGCTCTGTCCAAACCGAAATACCA
GAAGATGTCATCGGTGAAGATGACACTCCAAACTCAAGGTGCAGAAAGAAGATGCCATTG
GGGAATATGTCCTCCACCACTTGTGTTAAAATGTAACCGATACCCCCTACTTGAAAAGAA
TCTCAACAAGCACTTTCAACAAAAAATGTGTTTCTACACCAAAATGCAGGCATGCTGTCT
ACAGGGCAAACCATTTTCAGCCTGATATAGTGATATGAATTGTAAATTCAAAATATTATA
GCTCCATTTCTGTGTGCGGGTGCTCAATTCATATGCAACTGGAGCAGAACATGAACAAAG
ATTTATGATTACCAGTCATCTCAGATGTAACTTGAGCTATACAAGACTAAATGAACCAGG
CTACTCGTTGTCTACCACGACACAATGTAATATAGATGAAAACTGGGAGAAGCTGCCTAT
GCTCGATGACTTCAAAAACTTTTGGTGCTTCATATGCGATTAGTCAACCGTAAGAAGAAC
ATAAATAATCAAGTAACACATTGTAAACAAGACCTTTCTGCTCTGCAGACGGTTAACTTT
CCATAATGATTTGCATTTTGGGAATTTGAGGGAACTGCAAGCTGCAAGTAATTTCTGTTT
AAGATCAGCTTCTTCGGCCTGCAGCCAAATGGACTGGTATGCGCCACACCTGTGACAGAA
CAGAAGGAAATAAAACTCTCAGAAAACAACTGAGTGGCAACTGGGTACTAAGAACTTCTA
CAGAATGCATAAAAATACTAAGATGCCAAGCTCCACTTATACACCAGGCAAGAACAAGCG
CTCCATGAGTTCCTAAGATACAAGAAATTGGATCTCCATATCTTATTTACATAAAGGATA
ACCATCTGTAAAATCCACACTAAACAAGATACTACAGTGTTACTCAGTTACTCTGACCAC
ACCATAAGTGGCACTGCAAGCAGCAGAAGCGGCAGTTCATTGTGCAACCACGCCGCAATA
CAGATCCAAAATTAATAGTACATCTGCTCCTAGGCCCTTAGCATATAGAACAAGTAAGGT
GCAAATCTCCTTGGTCCACTAACTCTAGTGAATTTACGGTGGCCAATTGACACGCATCTG
ATTCTCATAAGCCAATACGTTTCCAAGAAGAAAGTACCGAAGCCATGGTCGAAGAAACGA
GGCTTGAGGAGCTGAGGAGTGGCTCACCGGATATGGAGAGGGCGGCGGAGGGAGCAGCCA
TCGCCGCCGAGCAGATAGAGGTAGGTGCGGAAGAAATGAGAGGGGAACGGCCTCTGCAGA
GGAGCCGATGAACTCCGCCGGCTTCCAGCAGAGCGGGGTGGACACGTGGCAGGATCAGAG
CGGGGGATCTATCTCTTGGCGAATGGTGTTGGGCTCTTGCATTTTTCTACGAGCAGTTGG
GCTCGAATAGGCTACGAAGCTAATTGGGCCTAGGAAAAGCTTACGTTCTTTTTGGTGATG
CTAAAAAGAAC