morexGenes - Barley RNA-seq Database

Contig contig_37547
Source Contig contig_37547
Contig Data
|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|
morexGenes
Links
Map Locations of contig_37547 (7524 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
	No map location	No map location
Predicted Genes from contig_37547

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_52466	1	243 bp	AK369753	Not available	Available	None
MLOC_52467	1	1018 bp	MLOC_52467.1	Available	Available	None
CDS Structure of MLOC_52466

CDS Structure of MLOC_52467

Contig Sequence (7524 bp)

>contig_37547 7524 assembly3_WGSMorex_rbca.fasta
CCCCCCCCCCCCCGCGCCGCCAATCGCTCGCCCTCGGCGCCAGCCGACCCTCTGCACGCC
GCAGCCAGCCGCACCACGAACGGTTGCAAAATTTTCAGCAACCTGACCTTTCTTGCAAAA
CTTTTCTGAAACATAACCTTTCTTGTAAAAAAAATTCCGCAACAGTACCTATGTTGCAGA
AAAAGAAAGAAAAAAATTACTGCAACAAAGCGATTGTTTCTGGAACTCGACCATTGTTTC
CGAAATTAATGGTTCAAATTTTATTTTTTCAATAAAGCGATGGTTTCTACAACTCGACCG
TCGTTTCAGAAATTATTGGATGCCCGGCCGGAGCCCCACGCGCGGATCGTACAACTGCGC
GTGTAGATCGGGATATCAGCAAATGATCCATTCAAACTATGCTGCATTCTCATCTTTGGA
GTTTTGTCCGACTAAATCCATAACGGACGAATTGATGCAAAGGAACCGGCAATTGATCTG
TTTGGAGACCTTCCAGAGGTACAATGTTAAAATCTTGTGCTCCAGCCCATCTCTTCAATG
CAGATTACTAATGTCTACCTGTGTTCATTTACGATGTATTTTTTGTTCTGCAGGGTGTAC
TGTGCACAGTTTTGTCAAAATTGTCTCTGGAAGAGCCTGTAAGAACCAGCCCATATACAA
AGGAAGGAAGGTTCCTATTGACCTCATTAAATCACCAGAACTAGTATGTGCAGATATATG
GTTTTCTAGAGTCTCTTTTGAGCACGCCATTACTTTACTTGGTAAAGTGCTTAAAAATGC
ACAACATCTAACCCTCGATATGGACTGTAAACCACCGGAGGTTTGCTCTTGGACCATCCT
TTAAGTCATGAATATCCTATAACTTCACATAATCGTGCCATGACCTTTGGTTGTTCATCT
TTCAGATTCCCCGTTTGATGTATTACCGATGCATGTTTTCTAAAATGACATATTTACAAT
TGAGGTTGGTTATGTCGAAGGCTTGGATGTCTTATCCTTGGTCTCTTTTATGAGGTCTGC
TCCTTTCATTGAGAAGTTAGAGCTGCACGTAAGTACTCATATTGGTTTCTTCTTTGCTGG
TAGTCCATACATTTCATTTTAGTAAGCAAACTATTGTGGTGGACAATTTCTTTTTATCTG
TGTTATTGCATATGCTGTCCTGTAACTGATGGATGGAGATACACTCTTCGACTTGCTGTT
CTTTATCCAACTCTCTTTGTTTTTAAGATTGCTGGACAATTTATTTATCATCTACTCCTT
CCATCTCAAAATAAGTGACTCAACTTTGTGCTAACTTTGTACTAAACTTAGTACAAAGTT
AAGTCACTTATTTTGGGACGGAGGGAGTATATTATTGCATATGCTGTACTGGAACTGATG
GATGGAGATACACTGTTAGACTTGCTGTTCTTTATCCAACTCTCTTTGTTTTTAAGCTAC
TAGTTTTTATTCACTCTAAAACTTTAATGAAATAAAGTGACAGTTTGATAAAAGTTTATC
AGCGAGTTGCTCATGTACACACAATATGTTCTTGACATTTGAAAATAGATACAGTGAACA
AGAGATTAATCACAAACCTTCTCAAGTTCTCATCATGCTTCATTTTTGGTCCAAACTTGC
AGTTTTGTTTCCCTGGTTATATCCATTTGGTACAAGAACCTGAACCTATGAGGAAGCTAC
CGGAGTGTCTGTTCAACAACTTGAAGAGTTTGCATATTACGGGATTTAAAACATGCACTG
GCCAAGTTGAGTTCCTTATGCATATGGTGGAAAATGCCCTTGCATCGGAAGGTTTAACTA
CAGATCATTCAGACAAATATCTCCTAGAAGGTCATAAAAAAGATGCGAAAACAGTTATTG
ACCATGTCCATAGAACTGCTAAAAATTATCTTGAAGGGAAGATTTCGCCCAAGTGCATCT
TAATATTACTTTGACAAATCTGTTGACATTGGGATGTACAGTGCATATCTAGCTAGGGCT
GGAAAATCCAATGCGTCAGCAAGTTACTTCTATGTATTCTTGTGCACGGTCCATTATATA
TTGAATAAACATACCTCCCTTTTGCATAAATCTGCACGCAGTTAGCCCTTCTCTACAGTA
CTTGTGTACAACTCTATTTAAACCTCGTGAGTTTCACGGTTTCAGCCTTTCAGTGTGTTT
TGGACGACGTATGCTTTCTCCCTGTGTGATATGTACAAAATCAAATCACAGGTCTTGTCT
CTTTTACCAGACACGCAGCCCTAGTTGTTTTAGTATTTTTCACCTTGCCGTCTCCTATCC
TATGCTATCAGGTGTGGCGCTGGATGTTACCCGGTCGCACAAAACATTCCCGCCTGGCCA
GTAACAAGTTACCTGTATATAACAATATACGGAACAAAATGATTTAAAAGACTTATATTT
AGAAACGGAGGGAGTAGAATCTTGAGCACAATATTACTATACTTGCTAAAGTTCTTACAA
ATGTGCGGCATCTGACCCTCAGTGCAGGCTGTACCACCAGAAGTCTGCTCTTCGATCATC
TTTTAAGTCATGAATTATCCTATAGTATCATATAAACGTGTCATGACGTTTGGTTATCTA
TCTTTCAGATTACCTATGCAAGCTTTCCCCTATGACATATTTACAATTCGTTTGCCAAAA
AAAAAAAGTTTGCCGAAACAATATATTTACAATTGAGATTGATCTATTTAAAGAATTCGA
TCGATAGCTTGTCTTTGATCTCTTTTCTGAGGTCTGCTCCTTTTATTGAGAAGATAGAGC
TGCATGTAAGTGCTCACATGGTTATTTAGCTGGTAGACGCACTTCTTATCAGTGTCACTA
CATTATATCTTAGGGCATTCAAGAGAAGCAACTCTAGAGCTAGAGCTTGCCGCTCTGCAA
GAGTAGGAGGCCGAGCACGGGCCTGAACCTTGCTGTGTGGCAAAACACCCACCAAGTGCA
TGATCGACATTCAGAGGCCGTATACTCCAAATGCGAAGCAAACCAAAGTTTCTGACAAAA
CCAACCATGCGATTGACAAGTAAATTTCCCTTTCCAGCATCATTTGATCAAATCAAAACT
CTTCTCTAGACCAGAAAACAACTGCACAAACAAACCTGAACCAACTGCACAAACAACTCT
TCTCTAGTGCTAGAGAAGAATTTTAGCCAACCAAGTGAAATTCATAGTGTCAGCAAATCC
TTCCTTGCTTGCTCAAACCTCAGCTCGCATCGATCACAATCAAATCAAAACTCTTCTGTA
GACAAGAAAATAACTGCAGAAAGATTTGAAACACTAACAAATGCCTAGTGTAGCTGCTGA
AATCAACAAATAAGAAGCTGAGGAAAACATGACGGAAATCGAACTCGGTTAACAGTTCTG
TACTCTCTCCATGTCCATGAAAATGACCACACCAGCAAACACCTCAAGTTTGTCATCAAG
CACATTCAGCTAGAGATCCTACTCTTGTCATCAAGCACATTCAGCTAGAGATCCTAATCA
AGCATGAGTGTTGTCATCAAGCAGAGATACTAATCGAGCATGAGAGTTGTCATCAAGCAC
ATTCAGCTAGAGATACTAATCGAGCATGAGAGTTGTCATCAAGCACATTCAGGTAGAGAT
ACTGATCGAGCATGAGCGAAAGAAGGGGACCAAGTACCACAGCATGAAGTGTCCCGGATG
TCTTCAAGTAGTTGAGGATAGCGGTTGCCTTCTTGCAAGGCAGGTCTGACGGGACGTCAA
TGGTCAACACGGAAGTCGGCGTCCTCAGATCCCGGCGCCGAATCATCTCTCGGGCATCAT
CGACACTGGTAAGCACAATGATCTCGGCACGCGCACTCCCCTCCAGAGCTTCTGCGTCAA
CCCTGCATGCAAGATCTTCATCAACGGTGGCAGGCTCGATGTCGGTTGCCCTCTCCTCAA
TGTGCTCCTGGAACTGGAAAGTCTCGGCCCTGGCTGCGCGCACTGCGGCAGCCGCACGCC
AGATCTCGGCGGCAATCGGCTCGGGGCAGGGCTCGACGGCAAGCGGTGCTGGTGGCGGGG
GTGGGAGCAGCAGCACGGTGTGGTCGTCCTGGCTGGGCGGTGGAAGAAGCCGCAGGCTGA
AGGGGCGCAGCAGGTTGGTCACGTCGCGCAGGAAGCCGTGGGAGCCCGGCGGGAGGGCCG
CGTCGACCCGGCGGAGAGCCGCGTAGAAGAGGACGCCCAGAAGTGACGCGGAGGCAGGGA
TGGGGCCGCGGGCTTCGGTCGGCGGAGGAAGCAGGCGGGCGAAGTTGCGCGCATGGATTC
GGAGAAGCACGCGGAGCGCGGAGCGTGAAGCAGGTTGTTGAAGATGCCAAGGTCGAGGTT
GACGTTGATCGGAGTGGGAGGCGCATCCTCCTCCCCCGCCACCGCGGCCTCGTGCATCGG
AGTGGGAGGCGCGTCCTCCCCCGCCACCGCGGCCTCGTGGATCGGAGGCGCGTCCTCCCC
CGCCACAGCCACAGCCACCGCGCCCTCCCGAACTCTCTGAAGGAAGAAGCCGACGAGCGC
ATCCACGGCGCGCGGGTTGTCCAGGTCGATGGTGAGCGGAGGCGAGCGCGGGAGACGGCG
GATCCCGGCTGCGAGCAGGACAGCGAGGAGAGTCGTCCCGTCCTCCGAGCCGACCCCGCC
TGCTCGGGCTCGGCGGCGCGCTGAAGCGGGAGAGGGAGGAGGTCGGCGGAGCGAGCTGGC
GCGAGGAGCAGGCGGACGAGGAGCAGCAGCCGCTGCGCCATGCCCCCCGCTACGGCGAGC
GGGGCGCTGACCTGCGGCGCCACTCGGGCCGCGTGGATGTGAGCGGGAGCGCGAACGCCA
ATTCGCGCGAGGACGAGCCCAAGGAGCAGCTGTCGCGCCTCCTCGACCTCCACGAACAGT
CGCGGGTCGCGGCCCTCCTCCCCGTAGAAGGTGATCCGAGTCGGGAGGCGGCGGAGCGCC
GCGGCGAGGACCAACGCCAGGATGCTGTCGCTCGCCGTCGCGGTCGCGGCGTGGTCGGCG
CCGTGCAGGAGCAGCGGGAGGAGGAGGCGCAGAAGCTCCGCGGGGCCCGACGGCGGCGGC
GCGAGGCGGCGTCGACGACGCTGGAGCAGCACGAGGACGCCGCGCAGGAAGAGCAGAACC
CGGCGGGACATGGCGGCGGTTACGGCGGCGGGAGAAGACGGGCCCGTCACGCCTCTTTCT
GCTTTGAGCGGGCTTTTTGAGTTTTCGGGATACCGCCTGGGATTTTGGGGGATAATATGG
TCATTCTCCTCTCGGTGGCTTTCCCAAATCCAGTTCCCTTCCGTTTCCGTTTGTTCAAGA
TTCGTCCAAAATTCCACATTTCAAAATTAATAAAAATAAAATAGTCGAAAATTCTCTTAA
TAAAATACAGAACTCAAAACCAGGACAACAAGTTTAATTACAAAATCTTTTTAGCAACGT
CTCAACATTGTCCCTTAACTTTTCGTCGTCATATGGTAGCCGAGCGTGTGATTCTACAAT
GTTGTCCTCATAGATTTCTAGATCTAGGCATGTGCGACGAGACTCTTTCCTATACAGATG
AAGCATCCGTTCTCTTCTTTCCGTACAAAATCAAAACGGTCAAGAACTTAACGGCTTATA
GTTTCTTCTTTATTTTCTTTGTTTGCTGGTGATTGACAACCTAGTTTCTAGAAGAACAAT
GCAAGTCCAAGAGGCATCATTGATACATGATCATACTGACATCACATAAGTTAGCCGTTA
TGTTCACAATGCCTCATCTTTCTTAGATCCAATGACACTCAAAGTAAACCATCAGAGGTA
CACCGTCTCAAGCTAAGACGTCTCTCTCTCCCACTCTCTCCCTCCCCCCTCTCTTCCTCT
CCCTTTCCCTCCCTCCCTCCCCCCTCTCNNNNTCCCTCTCTTTCTCCCTCCCTCCTTCTC
TCTCTATCTCTCCCTCTACGAGTTAGTCGGGCGTGTGCTCCTGCAATGTTGGCCTCATAG
AGTCCTAGATCTGGGCGGAAGCCACGAGGCCCCTCCCAATGTAGATGAAACACTCGTCCT
CTCCATACAAAATCAAAATGGTCAAGGCTTGAATAGCTAATAGTTTCTCCTTCCGGTTTC
CTTTTTTTTTGGAGGTGAATGGCAAAGACTTGAATGGCTGATGGTTATTGATCTGGCAAC
ACTAACCGGTGCCTGTGTTGTTGCACTTGGGCCTAGCATTGCTGGTAAGCTCAAACACAT
ATTTTCCTCTCAGCCAACTTCAATTTTGTGTGCTTCTAAGATGGAAATAGTGGAGTACTC
TCAAGTCATGCATACTAATGAACATGTCTCTTCAGGAATCTTCACACCAAGTGATGAACT
AGCCCAGGAAGTCACTGTTGCATCTGAGTTATCCGGGGAGAAGTTTTGGAGATTGCCTAT
GGAGGAAAGCTACTGGGAGCAGATGAAGTCTGGTGTGGCTGACATGGTCAACACGGGCGG
TCGACAGGGCGGTTCCATCACAGCTGCCCTGTTTTTGTACAAAAAATGTTTGGAACATTG
AAAATAAATGTTTGGCAAATAATAAAATATTCATGATTTTTTTAAAAGTTCTTGTGTAAA
AAAATGTTAATGAAATTGAATAAAATTTTACCAATCCAAGAAATTTTTATCGATGGAAAA
TATCCTAAAAATTCAAAAACTGTTCGTGACTTACAAAAGAGTTTATTCATTCAAAAAATG
ATCATGCATTTCAAAAAATGTTTTTTTATTTCAAAAATATTTGTTAAATCAAAAAATGTT
NNNGAATTTCAAAAATTGTTCCAATAAATTTCAAAAAAATGTTCGTCAATTCCAGAAATG
TTCGGCAATTCAAGAAAATTGTTTAATTTTTCCCAATTTCAAAATTATCTTCCAATAGTA
TTAGATATTCATGAATTCAAAAAATATTCTTACTTATAGAAAATGGTTATGAATTAATAA
GTGTTCACTAATTTAGAAAAGTTTCACGCTTTCAAATATGTGCACGATTTTAAGAAAATG
TTCAAGATTTCATGAAATTAAAAGTAATAGTGTATCCTGATGATTCAGCAAAATTTGTTC
GTCCATTAAAGATTATGATCTTTTTTCTTCCGTTGCAACGCTCGGGCACTTTGCTAGTAC
TTATTAAAACGATAGAAAGCGAATGGTTAAGATTTATCTATACAAAGTTAAGATATTGAA
AGGTTGAGATTTGTCAAATAGAGACTCATGAAACAGCTAGGTCCAACATTATTACATAAA
ATAAGAATTTAAGAAAAGTTTCAATCGGGCAAAGACCAATTAGTCTACGTATATGTGTGT
TCCCATGTAATTAGACTAGGCAAGAGTCAACACGTAAAAAAAGAGAAGGGTCATCATGTA
AAAAAAGGCTAGCAAGAATTCGGAATCACATAAAAATTCATTTGGAACATCTCTCGGCCT
GTACCTGTACGCACAGAAAGAATTATAGCATGGATTACCTCAGAAAAGCTATCATGGAAA
CGTACACAACCTGGTCGGGTATAAAAGGAAAGTATATCAAGGAATGAAGGAATTAAACAA
GGAAAAGTCTTACGTCCCACCGGC