morexGenes - Barley RNA-seq Database

Contig contig_375338

Source Contig contig_375338

Contig Data

|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|

morexGenes

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Map Locations of contig_375338 (1231 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
	No map location	No map location

Predicted Genes from contig_375338

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_52442	1	275 bp	None	Available	Available	None
MLOC_52443	2	222 bp	None	Not available	Available	None

CDS Structure of MLOC_52442

CDS Structure of MLOC_52443

Contig Sequence (1231 bp)

>contig_375338 1231 assembly3_WGSMorex_rbca.fasta
CTCATCCGCAGACTTGAGCTCATCTTATTCTTCTGTATGAGCTCCATCTGCACCTGAATT
GATTCCATGGCAGGGTGCAAAACTCAGCATCACCCCCTTCTCCTGCACCGCTCCCAAAAA
CAAAGAACCCTAACCCTAGAAATTCAGAAATTCATGGAGGAGAAGAAGGAAATAAGAGGA
GGAAGGAGATCTCACCAGCGAGAAGAACAACCGCCATGTAGAGGGACACCGGAGAAGGCC
GTTGTCCCTGGAGAGCTCGGGCAGGACCATTGCACCACCCACGCCGCCTCCGGGTCACCA
CCGCATGACAGAAGATAGGGGAGTAGCCTGCACCTCCAGGTCGTCCCTCCGACGCCGTAG
CTGCTGTCGCCTTCGCAATCTCTAGAGCGAAGGAAATGGGTGGACATAGGAATGCCGTGG
AGCCGCCTCCGGTCACCGTGCGTTATTTGTCCTCATCAAAAGGTAGCGGATCACGCCCAT
GGAGCGGATCATGGAGCGGATCACGCCCAAATCTCGCAGTTCGTCACCATGGACAGAGAG
AAAGAGGAGTACTCCAGACCATGGTGTGGTGGGATGCTACTTTTTTTTTCCTTCCTCCTT
TTCTTTAGATGGATGGATGGATCGGTGGACGGTGGGATTGCTGGGAACGGATGGTAGGAT
GTTTGCCATGTCATCAATCCGTGGCACAAATTATTCCACCGATGAAAATTAAGCATATGT
AATTCTGTGTTTTTATTTTGAGAATTAAGCATAGTTAATAAGAAAACGTTATACAACAAC
CGATGGATAATTTCGGTTGGATCCGCCCCTCAGTTATAGGGAATTAATGAGGCGGGGACG
GGACAAGCGGGGGGTGCACGGAGATCGGTCGATGGTTGTTTTGCGAGTTGTTTGTTATTT
CAAAAATTAATGTGTCAGGGAGGCGACCGAACCACGCCAGGAGTTAGATCGGACGGCTCG
CGCGCGAAGATCCGAAGATTTTGGGAAACATTGAGGGAAATATGATACATTACAATGAGC
TAAAATATAAAATACAAAGATTGCATTGTGAGCCTTGTCAACACCAATATATACAAGACA
CGTAGGTGAAATTATTGAGTTGTCTGCCTAGTAACCTCTATTTAAGCCTATTACCTTCTT
AATATTGTCATGGAGGACCTATAATGCGGACATAAATAGAGCTACACATGCGAGTGACCA
TTTTATGCAATGGGATTATGACCTTCTTGAT