Contig Data
morexGenes
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Map Locations of contig_37526 (3594 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location No map location




Predicted Genes from contig_37526

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_52430 2 745 bp MLOC_52430.1 Available Available LOC_Os11g38870.2, FRAME:+1, EVALUE:1e-47, 13111.m03824 protein helix-loop-helix DNA-binding domain containing protein, expressed
MLOC_52431 1 358 bp MLOC_52431.1 Available Available None





CDS Structure of MLOC_52430






CDS Structure of MLOC_52431






Contig Sequence (3594 bp)

>contig_37526 3594 assembly3_WGSMorex_rbca.fasta
AAAATGAGTGAATCTACACTCTAAGGTATGTCTATATACATCCGTATGTAGTCCACTAGT
TGAACCTTCAGAAAGACTTATATTTAGGAATGGAGGGAGTAGATTATTGTGTTTCTCAAA
CAACGGGGATAATTTATAGACCTAACTCCAAAGGGGGCCAAAATGGTTTAATGAAGATCT
GCCAAACACAAACATGCCTTCATGATAACTGTTTTCCTTCTTCACTATAAGGATGAACGT
CTAGCTAGCGTGCATTTATCTTCTAGAGTCCATGAAGTATCTGTTGTACTCGTAAGCAAT
GCCTTCACTTAAATTAACTGACACATAAATAAATTTCCATTGACGTGTCTCCTTTCCAAC
TGGTGGTTGATGCCTGCTTGATTTATCAAATGACATAGTTGTTTCAGGTTATTTGCTTCA
TTACCTTCAAGGTTAAGCCTATGTTACACCTATTAACAGGTCGGTTCAGAGAAGACCGAG
CTGCAAGATGAGAATACTACACTCAAAGCCCAGATAATAGAACTGCAGAACGAGCTTGGT
GCAAGGATCAGAAAAAATAACCTGAATTTAAGCAGCCTTGGGGTGTCACATCCAATAGGG
AGCAGCTGCACTGCTAATTTAGCAACTCACCCAACGCGGCATGATATATGGAGCAATACT
TCTAATGTAAGCACCATGCGCATGGTGCCCCCAACAAACACACTACCTCCAGTGCAGAAT
CAGCAGCATCACTCTGTTGTTTCTGGTCAGGTTGCATCACGGCCTCAGGAGCTCCAGCTC
TTCCCGGGGACAACAGCATCCTCGGACCGAGAATGTTCCGGATATAGAAGCAACCCAGCT
ACTTCTTCGAGCCTTGCGGATTCCTTGCCTGGACAGCTTCGCCTCAGCCTTCCACCAACA
TCACAAGAAGAAAGCAGCAGCAGCGGTGCATCCGGAAATTCTCCCTCTGTCAACTAATAT
TAAAGCGTTTAGATTATTAAAATAGTGTTCTAAATGCTCTTATATTAGTTTACGGAGGGA
GTAGAAAAGAAGGAGAAACCGGTTCGCCAATTGAGGGGTTACAAATCAGTTCTTGGTGAT
AACAGCTCTCCTGTAAATACCAACAAACTACTCACCTTACTGATAAAAAAAAAAACAAGC
TACTCACCTTACCGATCCAAACCTACTAGTTGCTCTATATGTTTAAATAACTTTACAATT
CTGTTTTGATATAATTTTGCTGCAGGCTAATCATATTTGCAATATAGAACCCACTAGTTT
ATGATAATATATTCGCCAAGGTTTTCATTTGTAAGAACATCTACAACTGGACTCGGCATA
TCCGGCCCCCTTAATGTCACAGCGCCGGACGGCACTTCATTCATCCTCTTGGACAACCAC
ATCCCTTGTATCCAAACTCTCAAATCCATCATATAGCACACACCAATTCAACAATGCAAG
AAAACAAAATAAATGACAATTTAACACATGTCCAAAGAAAACACAAGAATTCATAGGTAG
GCAATACAAGAATCATCCATGTGGGTGTGGACCACCTCCTTGTCCGCGGCTTTGCACGCG
TTGCTTCCTTCGCCGCTCCCTTAGGACGACATTCTTTGTCTTGCAACTCAGCTAAGGCAT
CATCAGGGTACTTGGCAACGTCATCTATGATTACAACACAGATGGGAGAAGGGTGGATGT
CGGCGATGGCTCGACCGCGGAAAATGGAGTACATACATGGAAAGAGGGGTTTGATTTGAG
AAGACAACCACATCCCTCATATCCGAACTCTCAAATCCATCATATAACACCACCAATTCA
ACAATGCAACAAAGCAAAATAAATGACAATTTAACACATTTCCAAAGAAATACAACAATT
CATAGGTGGGCAATACAAGAACCATCCACGTAGGTGTGGACCACCTCCTTGTCCGCGGCT
TCATGCTCGTGCTGTTTCCTTCGTAGCTCCCTTAGGGCGACATCCTCTGTCTTGCAATTG
ACCCTACAGATGGGACCCCTTATGGACTCAGCTGAGGCATCATCAGGGTACTCGACAACG
TCATCTACAATGGCGGCGACACGGATGGGAGCAAGGGTGGATGTCGGCGATGGCTCGACC
GCGGGAAATGAAGGACGAACATGGGAAGAGGGGTCTGATTTAAGAAGACAACCACATCCC
TCATATCCAAAACCTCAAATCCATCATATAGCACCACCAATTCAACAATGCAACAAAGCA
AAATAAACGATAATTTAACATATGTCTAAAGAAAATACAACAATTCGCAAGTAGGCAATG
CAAGAATCATCCACGTCGTTGTGGACCACCTCCTTGTCCGCATCTTCCTGCTCGCGCTGC
TTCCTTCGCCGCTCCCTTAGGACGACATTCTCTGTCTTGCAACTGACCCTACAGATGGGA
CCCCTATGGACTCAGCTGAGGCGACATCAGGGTACTAGGCAACGTCATCTACGATGGCGG
CAGCACGGATGGGAGCAAGGGTGGATGTCGACGGCGGGAAATGGAGGACGGACAAAGAGG
GGTCTGATTTGAGGAGCGCAGTTGTGTCGCATTTTCATGATCGGTCACTAAACCGGGTTG
TCCACCTGGACTTTTCGGGACGATATGAGGGGTCGAGACTGCAGGAGCTCTAAGATTAGG
GATGTAAACGGATCGGATCGGATCGGATAAGTTTTTATCATATCCTTTATCACACTTTTA
GATCGGGTTCGGAGCGGAGCGGATAATAACTAGATGCGGATTGCACCGGACCACGGATTC
GGACAGGATGCGGAGCGAAGTCGGACCGGAAATGGAAAAAACATCGGATGATACATGCAA
AGAGACAGATTTATTTCTATTATGCAACAATGTGAAAATATGTTTCTATCCAAGCGAATA
ACACTAGAAAGTGATGCTTTAAAGCTATAACTCGCACAATATAGTAACAATATGTAGTAC
CGATAAATCCATACTGTTTTGTAGTCCATTAAGGAGAAGCTAAACAGTAGTCCATTAAGA
TGAAGCCTGCTCTACTCGGCTACTACAAATTAACTTGGTGTTCATACTTGTACGTGACTG
CATGCATGGAAGAAGGAAGCACTACCACTATTCATACTTGTTTATCCTCAGAATTCCTAC
TTGTATATGTAAGCACTGCCTTAGATGTTTGCAACATAGTTCATGTTGCAGAACTTTTGC
AACAGTGCTATTGTTGTAGATTTTTTTTCAACAGAGTTAAATTGCAATTTTTTCTTTTTG
CCTTCACCTTTTATATGATGCTACGGAAGTTGCAACATGGAGAATGTTTCAAACGAGCTT
GACGATGACGCGGTCTGCAATAGGAGTCGCGTTACGAAAGCGCTTTTGAAACACGAACCA
AGTTGCAGAAAAGTGAAGTGGCGGTGTGTAATGCCCCAAGTGTGTAGTTGTCATATTTGG
AACCTAAATTATGGGGGTCCACCTTGTCATGAACATGTTTGATCTTAATGCATGTATGAT
TTCATGTGGCACTTGATCTTCTTTGGTTGTGTGGATATATTTTTTTGCTTGTCTTGTCAT
TATGATTGAGTTGATGAGGGGTTGGCCTTGTGATCACATGTGATGATGGTGTGT