Contig Data
morexGenes
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Map Locations of contig_37511 (4189 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_37511

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_52403 1 1278 bp MLOC_52403.1 Available Available LOC_Os06g07780.1, FRAME:-2, EVALUE:5e-126, 13106.m00810 protein vesicle-associated membrane protein, putative, expressed





CDS Structure of MLOC_52403






Contig Sequence (4189 bp)

>contig_37511 4189 assembly3_WGSMorex_rbca.fasta
TGTCGATCCACGGGATCTATCAGTGGCCACACCTGCGCTCATGGACCCAAGCACGGATTT
GGGCTAAAGGGAAAAGTGGTCAATGCTATGATCGTATTTGACCTCCGAAACTCTGTTCAT
CATGCAGACGCATGTGTTTCTTATGCGGGTGCGACGGTGGCATTGCGCCTAACTGAACCT
GTTAGGTTTTCGTCAAAAAGAAAAAGGAAAATTTGTTAGGTTGGTAAGAATCGTATCAAA
TTTCTCTGCCTCTCATACTGCAGCTCCATGTAAGTCAACTTTTGTCGGGGCGCAGCGAAG
CCCGCAAAACGCTTTAGTAGTCTGTTTGCACGGGCGCTCAAAACCGCATGGTACAGGATC
CGTGTCAAGCGTCTCCAAGATACGAATATGGCAAAAGTCCTCCTCGATCCACCCGGCGTC
ACGATCCCATGGTTACATAGACGCAAATGAAGAGGACGGAGTGCCGTCCAAAACAAAATA
GTTGCAACCTGGACAGACTATACTTATTGGATTGGAACCCTTGTCAGCATCCAAGCTGCT
GAAACCATGCAGCACACCCACCCACAGCAACGGACAACGGTGGCCACACAACACAAGCAC
AGCACAACGGTCCCACTCCAGCGTTGAATGAGCAAGGCACTCGATTACGTTCCAAACGGA
GTCTTCACAATCCAAGGCGTCACAATTACAGAATAAATAGCAGGCCCGTCTCCTTTCTCT
TTCTACACACACAAAAAATACTTTTTGCAATGCGACCGGTTGCGCTGGCGCTGCAACGGT
CGCTCTCCTGGGCTGGGAGACAGACAAGCCATGGGCACAGGCACACCACGAGACGAAATC
GTATGACCCTGGGCCCTCTCACCGGATGCAAGTCGGCAACGTGAAGCCGTGGCACACGAA
GAAGAGGGCGATGTATACTACTATAAGGAGGAGGAGTATCAACGCGGCCCTGCAGGAAAA
AAAGGAGGAAATATATGAGATGTTTATTTTAGTTTTGCCGACAAGAGGTTGGAAAGGCAG
CCGACTGAAGGGAACATCTTGATGGTTTAGGTAGCCACCCTTGGCATATAAAATGCAAGT
CGTTGTTAGGTCGTGTAAAGTGCATAAGCAAGCTGCTTGACACGGGAAAAACAGAGGAGG
TTCAGACTAAACCTACGCCCTAAGTTCATATAGTACATGGCTGCGTATAAGATCATCCAG
AGATGTTTTCTGAAAACAGTCAAGAACACATTTCAGATAGCAGAATCATCTTTTTTTTTT
TTGCCAATCAGAATCATCTATTTACATGAAACAGTCTCCAATCTTTGAATAAACCATAAG
ATAATTCATGTCCGGATATATATTGCTCGCTTTACCATTGATAGAACTAACAAGTACTGC
ATACAGGGGCCAGTCTATGTTGCACTCAAAATGCTACCACAAAGTTGCCTATACTAATCC
TGAATAAAAACATGTCAGAAAGTGCTTACAACACAAATGATGGCCATGAAAATTGCAGCT
GTCAATTCATATAGGTTGAAGTGAATATCGGGACAATTGAGGAAAAGTTTATGGTGGGTG
TACAAGATTGGGGCAAAGAAGTTCATGAACCAAACATAGTAACTAATGGAATGAAAAACG
AATGAGAAAAATTAATAGGAGAGGACAACATACGTGAGTTTGACATTTCTCCACCAAGTT
GTGCTTCTGTAGCGGCGAGCTTGTCTTTTGAATCGAACTGTATTTCCTTGCATAGTTGTA
GTCTTGTCCACCAATAGGTCTAAACGGTCACCTCTTTCAAGGACTTTATCAATATTATCA
ATCATAACACTCCTAACCTGCAAGAGAATAATGAAGAGTAGGTATCATTCTGAACTGCCA
AATTTACTGGGTAATATCCAACTGACACAGAAGCAATGCAAATCTGTGACAAACTAGCAA
TTTAACCAAAATGCCAGTTCAAGTACTCCACAGACCACAGCATGTTTACTAGTAGATTTT
AAAATGACAGCATGAGCTTAATTAACTTCTACAACATATGCTTTTCAATATTATACTCCA
GAAAATACCTGCATATTGGCCAAAAAAGTCTACCGTGTTCACAAATTAACAACTGGAAAA
GAAGGGTGTACCTGACTGATTTCGCCTCTCATACGGTTGATTTGATCTGCACTAGGGTCA
TTTGAATAGTAGTCCATTTGCTGACTGAGAACCCTTGAGAATTCGTCATTCATTGCATAA
GCAAGAGCTGTCAGTGCAGCGCGGCCATATGTCTTAACAAACTTTCCATGGATATCCTCG
AGGAAAGCAAATGGGATACGTCCTGCAACAAAAAGAAGCTCATAAGGAGATCGCTAGCTA
GGTGATACATATTACAATTCACAAGAGGGAGATAGTAAGCTGCAGAAACAAAATCTACAG
GTATGAACCTTTAGACGTCAGTCAATGCTTAATGTGATAGATTTGGTTAGCACATAACAG
ACTCAATTTGCTACAGAGGTTTTGACAAATTGCTGTTAGCAAAGAGCTCTTATGAGTTTC
ACCTCTAGCCTACNNNNNNNNNNNNNNNNNTAAAGGCTTTGTTGTTGTTGTTGCTGTTAG
CAAAGAGCTCGATTGTAAACCAGGCGGGGGAAGTGAGATAACGTAGCTGAAACACCTCTG
GTTGAACATCAAACAATCATCACCATCCCCACCAAACTCCATATACAAGGAGTAGATGAC
GAATTGCAGCAGAGTTTTGCCAAAATTGCACAGTTTTCCAGACTAGAATGCTTAGGCGCG
ATAATAATGTCCAATTCGAGTTGACCGAGATTTTAAAAAGAACAGACAGCTAGAGTTAGC
TAAGCGATAAACACCAGTAGCACTTTTACAGCATCTGATGCGTTTGACCTCAGGTTCAAA
ATCCAGAGTGGGGGCAGCCTGGACTCCATGTGTGCTCGAACGGACGGCAATTGGCGAGCC
CTGAATCAGTCTGAACAATTTGCCCCGTTTGACCCGATCTAGCAATCCCCCAAAACAGCC
CTGCAGCTCGGGCAGCAGCAGATAGAGAGCGGAGACGCGCGTACGGACAAACCCCAGCCC
AGCACAGCGCATTAATTCCCCCGGATCTCCGATATTCCCCCGCTGACGAAACCAAAACCC
CAGCAGAGAGATTCGAAACTCCCACCGCCCCGGACGCTTCGGTTAATTATTAAAAAAAAA
ATTACGGGGTCTCGCCGCGGCGCGACGGACCAGCAGAGCAGATTGGGGGGAGGGAGAGGA
GGGGCTGGCGGCGCGCTTACGTCCGGCGGCGTCGTCGGCCATGCAGAGGGCGGTGATGCC
GTCGGTGCGCTTGGCGTGGAAGACGTAGCGGTCCTGGGTGTAGGAGACGTGGCTGTCGGC
GCCGCCGTCGGGGAGGCGCTCGAGGACCTGGCGCGCGACGGCGCCCGCGTTGGTCGCTGC
CGCGCTGTGCTCCGCCAGCACCGTCGCGCCCCGCGCCACCACCCCGTACAGGATCGGCAT
CCCGCCTCTGGCCTCTGCCGTGTGGACTCTGCTCTTCCTTCCTTCCTTCCTTCCTTCTTT
ACTCGGGGCAGGGCGCGGGGGGAGGAGAAAGGGGAGGGGAGGGAGACGGGGTATGTAGGT
AGGAGTAGGAGTAGGAGGATGATCTGGCGAGGGACAGCTCGGGTTGGGTGGAGCCGTTGT
TTAATTGGCGGCGGGGCCGGGGATGAGCTGACGTGAGCTGTTGCGGTTGGGCCGCGGCCT
CGCCTCGGCTCGCTGGCTGCTCCGGGTTCGCTGGGTTTGGGGAACGGAGTCGCGCTCGGG
CCCGTTCCTGTCCTCGGGAATTCACCGACGTGCTCTGCACGCGGCATACACCCGCCAATT
TCAGCGTACGACCCCCATCCCGTACCGTCCTGTTCGTTTAAGCAAAACAAACAAACCCCA
CGACCCAACATGTAACGGTCTATATTCATCTTGTCTGTTTTGTATCCAGCCTGATCCATT
TCAAACGTAAACATGCGTTCGGTTCCGGTCCACGCGGACAACGAACGGACGCGTCTCTCG
TCCGCATCGGGACCGCGTAGCAGGCGACCACCTACCTCCCGCCGTCCAAATTAACTGCGC
ACACGCGGCCGATCCCACATGTCATCCGCCCAAGAGGGCGGGCGCCGTCCGTCCTAAATT
AGAAGTTGCGGCCTCGTGGGAGGACACGCGTCCACACCACCCATGCTGC