morexGenes - Barley RNA-seq Database

Contig contig_37464

Source Contig contig_37464

Contig Data

|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|

morexGenes

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Map Locations of contig_37464 (2472 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
No map location		No map location

Predicted Genes from contig_37464

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_52349	2	771 bp	AK250804.1	Available	Available	None

CDS Structure of MLOC_52349

Contig Sequence (2472 bp)

>contig_37464 2472 assembly3_WGSMorex_rbca.fasta
CATGAGTTGGTCGCGAGATCTTATGAGTTTCACCTCTAGCCTACCCCCAACTTGTTTGGG
ACTAAAGGCTTTATTGTTGTTGTTGTTGTTGTTGTTGTTGGGTGCAATGAAATTGGCAAG
TAGCAGATGCCTTATTGCTACGATGTGCACTGCAAATTGAAGGTTACCTCTTTTCCGGTA
GAAATGCAACCATTTATGTTATGAAAAACACCACGGTTTAACATTTTGAACAAAACCATG
CGGGTTCTTGGGTCAATAGCCTGCATATAAAGAAAAAAATGTTCAGAAAATGTACTTCAT
TAAAACATCATCCATTACACAAACTATAGAGTTAAAGCATGTTCTTGTATTTCTCAATCA
AAATTTATAACTTTATCTGAATGGACGAATGGGCAAGTATGCCCTGCCTATAAGAACTGA
AAATATAGTGTGGTCATCAGATCAAGTAATCAAATCACATGTGCAATAGAGAACATTCTT
TTGATGGCCCACATTGACAGGAAATATTAATTAAACAAATTGCAGAAAAGGAAAAGAAAT
AGATCAGATTAACCCCCCCCCCCCAGCGGCTTATCAGCATCGAAGCAACGGTACCTAATC
AGTCAGGAGAACTCATAAACAAAAATGCAGTAGGCTCAAAAGACAGCAATGTTCAAACTT
CAAAGTAACAAATTTCTGCTTCACGAACTTACACAACAAGCAATAGAAAATGAAGCAGAA
CTCGAGTCTGATGAAGGTACACACTAAGTTACAACTGAGATTTATACTTTTTTTTTTGCT
GAAATAGTCAGAGGATTAATGGTGCCATTTCAGCCACCTATATACACAGGAATGCAGTGG
GTTTGAGAACATGTTGCGATGGGAGGTAGAGCAGGAGCTGAAATAACTTCAATAAGAATT
CTTATTCATGTTCATCAAACCAAACATTCAATAATCTAGTAAATAAATTTTGATTTACTG
CATATTTGATGAGGGGAGAAACTTCTAAAAAAAACAACCTCTGGACAGAAAGCAAACTGG
GGTGAAAGGCTACCAGATTGATTCCTAATTTGCTAAAGAAACATGAAAGTGCACGGATTC
AATTCCCGGGCAAAGAATGAAATAAGCATCACCAAACAGCAAAAAAATGTACAAACCTGT
TCAACTGTAGCACGATCTGCCTTCCCGGTGTTCCTTGTTTTCCCAATTGCAGTATCCCTG
ATGCTGTCCCTTATTGCAGTTGTCACAGAATTTGACATCCCCACGTTCATTCTACCTTCC
CACTCCTGAGTGGTTCAAAACTCAAGAGTCAAGACATCAAATAATCAGCAAAAAAATAAA
AAATACCGCACCCAGATGTATAAAGCATGGTAGGTGTTTCGTTCGGATAACAATATCCAT
ATGTTAAGGCACCAGGTGTTACATAAAAATCAATGCTGCAACAGACATCAAAACTTTAGC
AGAATTATTTCAGTTAGTGGTTTGCAGGGTGACGTTGGAAATTTAGAACTTCGCTGGCTA
ATACTACTAGGCCTAGCTCCAATATGAAGTGCAACTGTTCCCTTTAGTAATTTCTGGTGA
CCAATTTTAACCAGAAGATAGTGAACCACTGAACCCTAGTCCTTTGATAGCATACGTCCA
ATAAATGTTACAGCACAAGTCGATCAGTGTACTGATCCAAGGCGAGGAGTTGAAACCGCA
TACCTCCAACGGAGCGGCGCGGACGTGCGAGGCGAGCTTCTGTGTGCGGTTGGAGAGTGG
CTGGAGTGTGCGTGCGAGCATGCCGCCGTGCGCGTTCGGCCTCCGCGCCGCAGCGGCGCT
TCCGGCGGCCGAGAATGTTGAGGAAAGACGCGTCGAGCCATCCGGGCCCTCCGCGGCGTC
GAGCCAGTCTAGGGCTTCACCCACGTCATGGTAGGACCAATACTCCTCGTCATCGTCCTC
CTCGTCGTCGTCCTCCTCCTCCTCCTCCGCCTCCGCGGGCGCCTCGGATGGTGGTGCTGG
TTTCTCTTCGGCATCCGCAAAGCGCCCATCCGATTCGCCCTGCTGCAGGGCGAAGGTTCG
GGGGTCGTGCAGCGGTGAGGCGACTGTGGCGGCGGCGGCGGCGGTGGCCATGGCTATGCG
CTTCTGCGGGAGCAGCGAAAAATCGAGGGCACGGTGGGAAGTGGGAACTACCCGTGTAGG
CCGATATACCAGTAACGCAGAGTCGCGTCCACGCCCCGCGATAGAAATTCGGCCCACCAA
GCATGCTTTTGGTATATCCATTTATGTCTCGTTTTCAAAAAAAAAAAGTCCCGTGGACTC
TTTGCCTCGTGTCAAAGTTGATTTTTAGAGCAACTTCAACCGCGGCGCAAAAAACGGCCC
CATACGGAAAAAACCGCCAATATGCCGCGCGCACGGGAGAAAACGACGCTCCAGCACCCG
CTGCATAATTGCCGTGTGATTTTTTTTTACCGGCGCGTGGGATCGGGGGAGGCATATTTT
AGGCTTTCGCTC