Map Locations of contig_37421 (10669 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_37421

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_52291 1 1496 bp AK369948 Available Available None
MLOC_52292 2 1120 bp MLOC_52292.1 Available Available None





CDS Structure of MLOC_52291






CDS Structure of MLOC_52292






Contig Sequence (10669 bp)

>contig_37421 10669 assembly3_WGSMorex_rbca.fasta
GTTAGAGTTATAATACAACTCATGTACCCTTTTGTATTTATCCCAATATATAAGGGGTTT
TCCTGCATATAGTCCACAACCTGTACATGTATATATANNNNNNNNNNNNNNNNNNNNNNT
ACAAGTTGCTTATTCCTAACAATCCTCACTATCTTTGATTTTCTGTCCTCATGCTTGCTG
AAATTCCTATTTTTTTCCATAGGCTGTTGGGTACAACTCAATTGAAGCTGAAGACTGGGA
GCTAGCAACCAATGGTGAAGAAATGAGCAAGCTGGAAGCTTTGCTTCTTGACAAGAACCG
CAAAATGGAGCATGAACTAACACAGTTGAAGGTTAGTATCTAGTTTATTTGCTGGAAAAT
GGTTTGGGTCTTTGGAGGACAATCAATATTTTTCATGTATACTTGTTATCTTCTCTGCTG
GAACTGTCTTGTAAGTTATTTTTTTTGGTATCTCTTAAAGGTTAAAATATCAGAGAAGTC
AAGTCTTCTTGAGGAAGCTGAAAAAAAGATCGCTGAACTAACTTCAAAGGTTGAAGAGCA
GAAAAAATTGATTCTGAAACTTGAGGATGACATACTAAAGGTTGCTCTCCTTGCTCTTGT
GATATTTCACATATTGCCAGTTGATCCTATTGTCCGTTTAATATATTCGTTATGGGTATA
TGTCTTCTGCATATATGGTTACCTCAATTAGCGCTACAGTCTGAATAGTGATATTATGTT
ATTACAAGAAACTACACAATCCTGGATTTTGATACTTAAGAAACCAAAGAATTTGTTATG
CCTTTTGTTTTCTGAAGGACATATGTAGCTAATATATTTATTAACTTTATTACAGGGCTG
CAGTTCAACTGATAGGAGGAGTTCACTTTTGAATGATTGGGATCTTCAAGAAATAGGCTC
AAATGAAGTATCAGAGGTAAAATTCTAGTTTGGGTTCACTTATAGCGAACCATCTTGCTT
TAATTCTGCATTACCCTTAGAAGAGGCATAATTTAGCTGTGGACAATAAATGCACGAGAA
ACACAATTCAAATGATCAACTTTAAGTGCTCACAGACATCATCTTAGTGTTAGTATGCCG
ATCTGCATTGTCATAAATGTTACCGTCACAACTGTTAATACACAACACTGAACCATTGAA
GAATTACCAAACACTGGTCTTTTTTGCACCATAATTTTCACAATTCATACTGTAGCTGGT
TTCAAATCAACAAGTGCTACATTTGGTTGGTGAATTTACTGTCTATTTCTGAAATATATG
TTGCTTACGAGGCCCACTAGTCACTAGTGGTCTTTGTTAACCATTTCTTGGTAAAGCACT
CTTTCTCCTTGAAACAAAATAACTCTTAACATAAACAACCTTTCTTTATATGTTTTAATA
TTTAGCGCCTCTACCACTGTTTCCCAGAATAAACTACTGATTTTGCGAACATGGGTGTGA
TTTTACTCCCTCCGTCTGGAATTACTTGTCACAAAAATGGATATAAATGGATGTATCTAG
AACTAAAGTACATCTAGATACATTCATTCCTACGACAAGTATTTCTGGACGGAGGGAGTA
ATATTTAGCAGTATATGCAGTTGGTATCAATAGTATCCACAGTTCTAGATGTTAAGGGCT
TAAGGCAAACACCAAATGTGCCTAAAAATCATTTCAAGAATCATGGGGCATCGTCTTGGA
GTCTGACTCGGTCAGAGGGACTCTGGGCTAGTGGAGGTGGTTGACGGCGGCTTGCGTCAC
ATCTCCATGTGAGCAGCAGAAGCATCCGTCATATGCAAGGTGTGCCAGGCGAGCTATGTC
CGCTAACGTCATGGGATTGAAGTGGCATATGTTTGCTCTATCGAACATAGCGGTCCCCTT
CGATGTCATCGAGCTTCGCGGATATGCTTGTGGCAGCTCGGATCGATACAACGGTTTTTG
GTGTCTACTCTAGTAGCAGCGCAGGCGCTCGAGTACCCGGCCGGGTGTGTTGTGGAGTGT
GGCCTTCTGCCGTGTTTTATGTTTTGTGTGCTTTATGCCTAGTCTATAGTACAGGTTTTC
GCCTGCTTTTCCTTTAATAAACCAAGCAGTTTGGGTCCTTGTACCATCTTCTTCTTCACA
ATGAATATGACAGCTCTCCTATTACCGTTAAAAAAAACTCATGTTTTTTTAGCAGTACAT
TTGATTTTGAGTTGTTTAATCAGATCATCAGTACATCCACGTCTAGCTTCATTTGTTTCT
TTCCATTTATTTACAGGGTACTGATCCAAGGAATGCATCACCAGACCAAGATCAAAGTTC
CATGCTCAAGGTCATCTGCAATCAGAGGGACCGCTTCCGTACACGACTACGTGAAACCGA
GGAGGTATATATATTATAGGCTTCTATTTTTGACAAGGTTTGGTAATGATATTAGAGGGT
TATTTTCCTTGATTTTCTTGAAAGCTGTGGATCTGTTATGCTTTGCTTGTGATTTTTTTT
ATCCCGTGATGTTTCTTTGCTTCATGAAATATGAAAATGCATCACCATTGACCATGTATT
GTCATTTTTTACGTATCCCAGGAACTAAGGAGATTAAAAGAGAAGCATGAAATGCTAGCT
GTAGAATTGGAAAAAACAAAAGCTGATAATGTGCAATTGTACGGAAAGATTCGATATGTC
CAGGACTACAGTCATGAGAAGATTGTTTCTAGAGGACCAAAGAAGGTTTAGCATAAATCC
TTATGATGGACTTCACATACTCGACATTGTCTAGCATTTGACCTTTGTTATGTTGCGCCT
TGCAGTACGCAGAAGATATTGAAAGTGGTTCTTCAGATGTTGAAACAAAGTACAAGAAAA
TGTACGAGGATGACATAAATCCTTTTGCTGCTTTCTCGAGGAAGGTAGATATATTGAACT
TATCATCAGCAACACGTGTTATCTATGGTACTGCACGCAGCTCAATTTTTTTTCCATATC
CAGGAAAAGGATCAAAGATACAAGGAACTTGGTATAAGAGATAAGATCACCCTCAGTAGT
GGCCGTTTTCTCCTTGGTAACAAGTATGATACTTCCAATTTTTTTGGGTGCAGTTCAGGT
TTTCCTTTTCTTTGTATTTGTTGTAGTTACCGATCTTTGATGATAACTATTAAATTGCTG
TAGAAACAGCAGAGCTACACTTATTTGACCATTCCCACCGTATATATTTACAATTTGTGT
AAAAAACACAAAATGCTTGGAATTTGAATTAAATAAGTACAACACCGATGACTCAGGGGT
GCATGGATCTGCCACTGAGATGTAGTTAATTTGGTTCTAACTTCTTAAATTATACCCTTC
ATCCGTATCTTTGTTTAGATTTATATATTTGGCCATTGTGCTCATGTCCAAACATTGAAA
CTGGTCACTATTTAGTTATAGCCCTTCATGGATAAGAATCCGTAAGTGATTGGCATTTTG
TATTACATGATGCCTGAGTTTCTCTATCGTATGATTTTATCCATGAAGCGGACCGAAAGA
AATATAGCATGTGTTTTATTTGTATTCACAGATTTGCCTGTACTTTTATATTCCCTCCGT
TCACAATATAAGATGTTCTAGCTTTCTTCTGGATCGGATGTATACAGACATGTTTTAATG
TGTTTGTTCACTTGTTTTGGTCGGTATGTAGTCCATATTGAAATATGCAAAACATCTTAC
ATTTGTGAACAGAGGGAGTATTCTCCTACACTATTGGATTGCATGCATTTCTTTATTCTA
TCAATGAAGCGTACTGAAATAAGAAATTAATGTAGCATGTGCTCTGTTTGTATTCACAGA
TTTGCCCGGACATTTATATTCTTCTACACTATCGGGCTGCATCTCCTAGTGTTCACGCTG
CTGTACAGAATGTCAGCTTTGAGCTATCTGAGGTAAGCATGCATCACATCGTCAATTTGA
ATTTGATGCCCTGAGCATGAACTTGGCTAACTTGAAACACCTATGCAGCATAACACCTGC
ACATGATGAGATCATTGTGGACGCTGGCAATCAGACACTATCACATACACTCTGAGCCAA
GTTTGATGTAACAGTATTATCACTTGATCAGTACTGAAAACGAAGCGTTCCTGGGATTTG
GTCTCGAGAATCTCTGCATAGGATCATGACTGAAGTTTTAGTTTTACTATGCCCTTTAGG
TGCCTTGATATGTTCTCTTCTGTAGATAAATTTCCAGTAAAGCGGGTTACCAAGGGACGA
GGTGGCGGATGAGGTGTGTGGTGCTCGAGTCATTCTGTAAACTGTTGTATTACCAAATTG
CCCATTTGATGACAAATGAAAGCACATATGTACAAACACAATGCCATCCAATGTACTCCC
TCTGTAAAGAAATATAAGAGCGTTGCAGAGGGAGTATGTTTCAGCATATATGGTTGGGAG
TTTGTGGCGAGGACAGCTGTACAGAATTCCGGAAATAAAAAGGATTAAATGAGTAATATT
AGAGTTGTCTTCACATTATTTTATCAGAGACAGTCTTGAGCAGATATTTGGCAAAATCGA
GTTATCTGGAGTCCCTTGTATGTGAAAGATGAAGTATTCAAACGTTGAATTCTTGCAATT
GAAAGAGATTTTTCCTGGCTACTTTGCATCCAAAAAACTGAAAAAGGAAGAAGAGAAACC
AGGGGAGGCGGAAGGGTTCTTTTGACAAAGAGGCGTCTCTGGAACCCTATTTAGAAGAAC
TAAAATTTATCTTTTTCGCAGAGAGAAAACAAAGGCATTTTTTCATAAAACTTTATGCCG
TCCAACTTTGTGAATATGCATGCGTGGAATTTTTATTTGAATATTTTGACACTTCAAAAC
ATGCTTAAAATGCATTGTTTAAAAAGTGGATTCATATGCCCATGGGTTGGACGTGCCCTC
TTACTTTGCATCCAAAACATTGAATATGACGTGCACTCTCCTGCTTTGCATCCAAAACAT
TGAATAGGAAGAAGAGAAATCAGGGCAGGCCACGGTCCTGTCGACAGAGAGGCGTTTGCG
ATGACTTTGTTAATCTTAAGACCCGTTAGCTTTTAGTCTCTCATGTGTTTACAGGGATAG
AATATGCGCATATGTACAGAAAGTGCTATTCTACACCCGAGCTCAAATGAGCTCGGGTGA
ACAGTAAATTCATAAAATATTTTAAAAACATTTAAAAAAAATCTGGTTTTTTTACCGCAA
ACTTTGACAAAATTTTTAGTAGCTTGCAAAATTTCAGTACGAAATCACATTTTTTGAAGT
TGTGACAAAAAAAAAATTACTGCTCCAAAATGCTTTTAAAGTAACATTTTTAGAGTTTAG
ATTTTGTTTTTTTTGCCACGACTTTCAAAAAATGTGATTTCATGATGAAATTTGACGAGC
NCTTAGAACATTTGTCAAAGTTTGTCCAAAAAAAATTCAGATCTTTTCAAACATTTTTAT
AATAGGTTTCGAATTTAGTGAGCTCATATGAGCTCCGGTGCTAAAACATCACGTCCCTCC
GTTTTAAAATATAAAACCTTTTAGTAATTTCACTAGAAGACTACATACGGNNNNNNNNNN
NNNNNNNNNNACTTTAAAATATGTCTATGTACATCTTATGTAGTTTATAGTATAATCTCT
AAAAGGTCTTATATTTAGGAAGAGAGGGAGTACTTGTTTGTGTACCATGTTCCGGAGAGG
CAGGGAGCGAAGGCGTGCAAGAGTTAAACTAGGCGAGCTTTATCCGCCTTTTCTTTCTTT
CAAAAACTTGTCGAGCTTTATCCGAAGAGCCATCCACACCCGCGGATTACCTGTCGAAAA
CCCACCCGCACGCACAGTAAACTAGCTTGTCCCCGAGCACCGCGCATGTCCACCGCAACC
CGCAACCTCTCCCGAGCTACAAAAACTGAGATTCCGCACCGTTCTCCCCGTCCCCACCCC
TCCCTTCCGGCTGCCGGCCCTACGGCGCCCGCAAGTGACACCGACGACAGCGACGGCGCC
GGGGAACCTGTGGACCGCCGAGGAGCCGAGGGTCGCTGTCTGCGGTCAATTCACGGCGGC
GCGTAGCGCCGGATCGACCGGCCGGCGGCGGCCGCAGGTGGGCTCCGGCCGGCGGTGGGG
CCGGGAGGGAGGGAGGGACCTCGGCCTGGCTACTACGGGCCATGCACGCGCGGTCGTGGT
CTCCGACGCCCACGCGCCACACGGGAGCACGCGGGGCGGGCCGGGCCACGTCGAGCCCCC
GGCGCCGTCGTCGTCCGCCGTGATCTGGCGCCGCTATCCGCCGAGCCGTGCTGGAAGCAT
GTGTGGGGCGGCAGGCCGGAGCGGCCGCGTTGGGCCGACACGTCGGTCCTTGCGTACGTG
CGTGTGTAGGTGCGTTTCGCCGTACTTGTGGTGCGCTAGCATCGCTGTCCTGTGCCTCAG
CTCACATCACCCATAACTAATTCGGCCATGGTACAGTACTTTTTTTCTTTTTGATGGGAG
GCTGTCCTGGGATGTCATGAAGCTGCGAAAATGCTGTGGAAATGATTCTACATGTATACA
ATCGGTGTACGAATATTTCGATGCAAAAAAAAAAAAAATGTAAAACACACTATTCCATAA
TAGAAACTGTAAATTAATATGACCATTTACAGGACGTGCAAAATTTTAAAATGAATCATA
CTATTTCATACTTCCTCAGTCCCAGAATAAGCGTGTGAAGTTTAATACTAGCTTTAATAT
AAAGTTGCGTTAAACTTGAGACACTTATTTTGAAACGCAGGGAGTAGTATTGAACTTCTT
ATAAGTTTATGCAACTTATTGTGCAACAAAGTACCCCTTGAAGATATGGAAGTAATTGAA
AAAATGAACAACGGAGGATACTCTGTAGGAGCGGCGGCTGCAATCTTTAAGGAATTTTTT
ATGGCTTGTGATTTTTCTTTTACTAGTTTTGAGCATTGTAATATAGAAGCAAACAAGATA
GCTCATGAGCTCGCGAGACTAGCAAAAAGTTTTGATACGATGGAGTGGATTGAGGAGCCT
CTCGAAAATATTGTATCTATACTTATAGACAATGTAACAATTGTTTCAAATTAATAAAGT
TGATGATGTTTTTTCAAAAGAAGGTACACCTTGAAGACATTCCCGTCCATTTGTACAGTA
ATGAAATTCTCATGAATATGTTTCTATATGTCCATCTTTTCTCGTAATTGTCTAAGCATT
TTTTGACTTTTTTTTCCTTACCATTTAAAGATGATTTCCGCTGTATGTTATTCAAGTTCT
TTTTGTGGGCATGTTATTCCAGTGTTTGCTAGCCACATGTTCCACGCGGTTATATTATTC
AAGTATACGCGTCATGCTAGTACAATTCTTAGGACATCAATGTATTACTTATGTATATCA
TTTCGTTAGGGCATTTCCAATCAATTACATGATAGGTCACATCATCATATACTTAAAACA
GAAAGAACAACGAGCAACGCGAAAGGAGAAAGGGAACATTCAACTAAGGCAACGCTATAC
CCCTATACCAATTTCCTCCTAATAAACTTTTGTCATATGAAAAATTCCATATGGCATACT
ACAATACGTTTCAAATCTCGTGGGCCAGAGGCAAAGTCCAGCTTTTATTTCCTGATTAGT
GTAACTGCTCCAAAACACGCGCCTACCCATTAACTTCTGGAGGCTTGCTTCCTAGAACAG
AGTTGACCATGGTGCATGGTGCTTTTGCTTCAATCCCTCGACTATGTTAGAATGTCTTAT
CTCAACATAGTAATTGTTTATCTTGGAAAAACTACATTGAACAAAAGAAAAGGGTTCTAA
TGTAAATTTCTTTATCGCGTGTTTTGATGTAATGAAATCTATGTCCAGTGAACGTCTTTA
CTTTTGTTTTGAATAGAATAAAAATTTGCTACCATGAACAACACAATTTGCTTCTATTGC
AATTGAAAATTGCCTGGACCTGAAAAACTTGTGTCCAAGAACTTTACTCCAATCTAATAC
TAAAATTTTGCATCAAAGAATTTGTTTCCATGCAGAGAAATTAGAGTCAAATATATATTT
TCATTATATTTCCAACACAAAACAAACTTTGCTACCATCCACTATAAAAGTGCTTCCATC
GCAAAACTAATTTGCTCCTGACCGAATATAAATTTGTTTCCTTGCTCCGCCCACTCATAA
ATCATATTTTCTTCAAGTCGCCAATAGTATGATGCTTCCACACTGTATGTTTCTTAAAGA
CTAGAGACCTGCTTCCCTTCATGTAGTGTGTGGTCATGTTCATTATGAGGTAGATCCATG
TATGTCCATGCTTTTCAGTGCTTCGCCGCCATATATGCGTGCCTTTTCAACACCTATCAG
CCCCGAAGCCAGCACACAACTGCTTGAGGCATTTATCAGTTAGGCATGATGCATGAATAT
CAAAGGTATGAAGCAAAAATCTGTACTACATGCACATTAGTAATGAAGCACATAACATGT
ACATTAAAATTATACGATTAATTAGAACATTATAAATAAAATTTTGGAAGAAAATGACCT
ATACCAAGAAACATCTATACTATAATATGAGAGCATGGCATGTTTCAATGGTGATACCAA
TGGCAAGAATAAATTTCTAAAATAAGACATGGATCATGGAAGCAATCCACAAACCAAAAA
AGCACACAAAGTGTGATATAGGAACCCCATATGCAGGAAGCAAGAAAATATCCTATCTCA
GTATGACTGATTTTAGGGGGAAGCATAGAACATTGGAAATGAAAACATCGAGGAGTGGGG
CCGGTGCAGGTGGGTTTAAAGGCATGACACAAAGAATCGAATCAGGGACGGTGTTGTTGG
AGGGAACATGGACGGCGCAGTGGATGGCGACAATGGAGGTGATGTGCGTACCCTTGAGCA
TACCCTCTGCTTCAGTCTAATTCATTGTCGCATGTCCACTGAAAATGTAAGAAATGAAGA
TACGGTCATAGAGGGAATGAAGAGAGACATGAAGATGGTTGCTAAAAACAGCTGTATGGA
AGCAATGCAATAGAATTAAGAAACTTATTTGTGAAAGAAAATAAGGGAAAATGTAGGAAG
CATGAAAATATGGTAACTGAACATTACCCATCCTGGTTGGAAGCATGGAATAAAATGTTG
ACAATGAGGTAATACGCTCGCGGCCAACATGGGGATCCATCTTTTGCGTCGTCGACATAT
ATATATTTAACGGATTTGCTCTTCATTCATGTGTGAGCAATTATCTAGCTAAACAAAGCA
ATATTATTACAGTGTAAAAGCACCGAAAAATAATACTGGGTACATAAGTGGTGCGACTCA
AAACCATGAAAAACTGATGATGAAAAAAAAACTAGTATCGACACCAACTAGGGAGGCATA
TTTGTATGATGTAATACATACTAATTTCATAGAAATTTATTGATGATATGGTGACGGACT
ACATAATATAGGTCACAATTTCACAGCCGCAGCCAAGAGTTATAAACTAAAATATCCACA
CAAAGAGATCACACAAAAGAATGTTCCTCCATGGGAGATTTTATCTAGCCGAACGAAGCA
ATACTATGACGTTGTAGAAGCACGAATAAATGGCACTGGATACATCAGTAGTGTTACTTG
GAAGCATGGAAATTAGAAACTAGGACAAAAACTAGTATCGTCACCAACTAGGAATCATAT
TTATACGATGTACATACTAATTTCATAGAAAATTATGGATGATATAGTAAATATGAAATG
CACGTCCCAATTTCACGCCCACATAAACGGAATAAACCAAAGTATACACAAAGAGACCAC
ACAAATTTCATAAAACAATTAGGCCAAAATTAACAAGCAATGCATGAATTGTACAGTATC
AAGAGAGGTGAATCAAACCCTTGGTCAGATAGGGAGATGGGCTGGGCGAATGATGTGGTA
GTCGAGCCATGATGGCTATTTTGTTGGCACTCCGGTGAGGTGGACCTCAGGCCATGGCTG
CAAGTGGAGCAGGGCATGATCGTGGTGGAGATAAATACGACCGGGAGTTCGCGAGGTCAC
TGGCTGGCAGGTCATGCGGCCGTCCCTCCTCGGCTGCCGAACGGGATGGCATGTCGGCTA
GGCGGGGCGGAGGACGGGTCGTCGGGGCAGGATGCTAGCTTGGAGAGAGATCTGCGGCGG
CGGGGCAATCGCGAGATGGGGACTAGGTCTGTTCTGTTTAGGGTAATTTATTTGGGAGAA
GGAGAGATTTTCGGGGCTGGACGTAAAACTCGAGCAGTTTGGAAAAATATCTCGCGTAGG
ATTTTTATTGCTTCCCTCAACCGTGAGATCAAAGGGAAATCAATGGCCGATGACCAGTCT
GACGAATGCTACGCATCAGACTTCTGTAGAGAAGTGTTTCCCTAAAAATATTAGACTAGC
ACATGTATTGGTTGATGAATATGTTCCACAGCTCATGGAAATGAAGGCGTCAAACGAATA
ATGTGAACACATGTTATGAACATGGGGTTGGACAGTGTAACGCCCAAGATGCGATCCTAT
CCTTATTTTGGCGCGAGGGCCTAGACAGGGATAGAAGCGCGTCTGGTCATTTCACAAGAA
TGAATATCGTTACAAGTACATGTACTGAAAAGGTGACATATGTGGAATTGGCTTACACTC
GCCNNNNNNNNNNNNNNAGTATCATCAGTACAATACATAAACATCACAAACAAGAGCAGG
GTCCGACTACGGANNNNNNNAAACGAGAAAAGAACGACGTCCATCCCTG