Contig Data
morexGenes
Links



Map Locations of contig_37402 (4401 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_37402

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_52257 1 1182 bp MLOC_52257.1 Available Available LOC_Os03g08280.2, FRAME:+2, EVALUE:3e-164, 13103.m00946 protein peptidase, T1 family, putative, expressed





CDS Structure of MLOC_52257






Contig Sequence (4401 bp)

>contig_37402 4401 assembly3_WGSMorex_rbca.fasta
TTTTTTTTTTTTTTTTGGAAAACCCGGTGGGAGAGGGCTAGGGTCCGACTCGACCACAAG
TCCCCGAACGGGCCGGCCCTTTTTCCTTCTTCTTGCGGGAGAAGGCAGGCCAATAAGACG
CAGCGCGCCGTCTAGTCCCCCAGCCGAGGTCACACCAGCCCGCAGCCGCGCACACAGAGC
AAGCGACGCACCACCCAGGCCCAGCTCCGGCGAGATCTCCGGCGACCCTTCGAGATGAGC
CGCGGATCGGGCGCCGGCTACGACCGCCACATCACCATCTTCTCCCCGGAGGGCCGCCTC
TACCAAGTCGGTGCGTGCCTCCCCAAACCCTAGCTTTCCTTCCCCTAGCAGATCTGTGGG
GGGCGCCCGGCCCTCGGTTCGTGCGGAGTCTGATCCGTCCGTCTGGTGCGTGCAGAGTAC
GCGTTCAAGGCGGTCAAGTCGGCGGGGGTCACCTCGATCGGCGTCCGAGGCAAGGACTCC
GTCTGCGTCGTCACCCAGAAGAAAGTCCCGGTGAGTCTTCCGGCCCCCGGTCGATCACAT
CTCTTCGCGGCGCCGTCGCTGGCCCGAAGAAATTGCGAATTCGGCCGCGTCCGATCCGTC
AACTGTCTATACCTGAAAGGCTGATTTTTTTTGTTTGTTTGTCCCCTGTGATGTGGTTCT
GGTTGCAGGACAAGTTGTTGGATGACACCAGCATCACGCACCTCTTCTCCATTACCAAGT
ACACCGGCTTGCTTGCCACCGGCCTCACAGGTTTGGCCACCGTGCCTCGTTTTAGTATAT
ATATGCACTCTGTGATACTGATGTATTGTGACAGTAAACTGAATTCGTTTCTGATAATGG
CGACGAATGGCTTGTTCTTTGTGAATTGACGATGATGTTTGTTTCTGTGTTGTTAGCTTT
GGTGGTCTCTAGTAGCATTTTTGACACTTCGGGAATAGACCACCATCATATCATACTGTG
ACTGTCTGTGTTTTACTGTGCTTTCTTTTAGTACCGATGTATTGTAAGTGAATTCAGTTA
GTCTTGTAGACAACAATTTTTTTCTTTGTGAATTTGTCAGTGAAGTTTGCTTTTCTGCGT
GTTATGCTTTGTGATTTCGTGATCTTGACCAGTATTTGCAAGTTTGACACAATAGGCCCA
CCCCCCAACTGTGAATGTCTGAGAGCAGATGATTGGATGCTCTGGAATTAAACTAGGCTT
ATGTAAGATTCTCTATTGGATTGTAGTTATGTGTATTTGTGAGAGCTGATGGTCAAATGT
GGGACCATTTTATGTGTGTCATGATAGGCTGGAGAAGTTTTTATTCTTGCAGGATCTGGA
CATGTTTTACTCTTAAGAAATTATCCCAAATCTTCTTGAAGTCTTGTGTAAAGAAGGAGA
CTTTAGGTTATTTTTTATGTTCTATTGCTTGCTCTTGCCCAAGAGCTAATTAATAACCAG
GTAAACAGTGGAGGGCTTTGCTAGTTGTTTAAATTTTGTACTCCCCCCGTCTCAAAATAA
CTGTCTCAATTTTATACTAGAGCTAGTACAAAGTTATACTAAGCTTAAGACACTTATTTT
GGGATGGAGGGAGTATGAGACACTGGATAGTGTATTGGTATGTCTACTCTGTTCCAACTT
ATATACCCTTGAAAAATCTGGTATTTGTTTGGATGACAGCCAATATTTTGGCATGCCAAT
GCCTCTTTGCCCACTCTAGTTCGTACTTGCCAATAGTGACCAACTCATGGGCAAGTAAAA
CCTTTACCAAAATTTTGGCTAGCTACATACTCCATCCATAAAGAAGTATAAGAGCGTCTA
GATCAGCTCTTATATTTCTTTACAGAGGGAGTAGTTGGTAGGGCAAACTTGGTCTTGAAC
CAAACATAGCCATTTAACCACAGGCTTCTTCGTTTGGAGAATATATAGGGAACCATAAGA
AACTACACAACTAAATTGTTGTACATCTCCCATGGGTTTCCTCAGCCCTTTCTTTCCTTG
TCAGTGTGATATAGACATATAGTTTGGGTCATTTCTTTCTTAGTTAGTGTGGTATGATAT
GGGCCCTTTCTTTCCTTGTCAGTGTCGTTTGATTAGGGTTAGGCCTTAAGATTACCATAT
TTACTTCCACTCATTCCTTTTGCTGCTCATTGATGTTGAATATTGTTTTTTGTTTCCCAG
CTGATGCGAGGTCCTTGGTCTCCCAAGCAAGAAATGAAGCAGCCGAGTTCCGTAAAAAAT
GGGGATATGAGATGCCTGTGGATGTATTAGCAAAATGGTATCGCATCTTCCTTATTGAAG
TTCCTTTTTTAGTCATCAAAGTGGCAGCAATAACACTGCATGTCTGATCAATGTTTCAGG
ATTGCAGACAAAGCACAAATATACACGCAGCATGCATACATGAGACCCCTTGGTGTAGGT
TAGTACTTATCACGTTACATCTGTTTGTACTATGATGTCGTTGTGTTACATCAATTAGCG
TAATGCCTATTGCCCACCATAATCGTTTTTTGGTATATTTGGTATATTCTTCAGTTGCTA
TGGTCCTGGGTTATGATGAGGAGAAAAATGCTCAGCTCTTCAAGTGTGACCCCGCAGGTC
ACTTCTTTGGACACAAGGTATACAGTAACTTTCTGCACTGCACTATTTTACTTCCTCTGT
TCACAATATAAGATGTTCCAACTTTTTTATGAATCGGATGTATATAGACACGTTCTAGTA
GTCCATATTGAAATATCCAAAANNNNNNNTATTTGTGAATGGAGGGAGTACTATTCAATT
ATATACCAGCCAAATGCTTAATCTTTCTCCTTTTATGTGTAGCAAAACCACTGACAAGTT
TTTTTTCAGGCAACTAGTGCCGGACTTAAGGAGCAGGAAGCAATAAATTTTCTGGAGAAG
AAAATGAAGGATAGCCCGCAGTTCACATATGACGAAACTGTTCAGGTAAATGCATGTCTT
CTCCTTTTGAGGAAAACAAGCAGCTCTGAACTAGGGTGTTCGTATATACTGAAGCTGATT
CATTCTTAGCTCGAAGAGATATTTTGTGTTCTTTCACTTTGGTACTCCACTAATATTTTC
ATGTGCTCTTAGATTGCGATTTCTGCATTGCAATCTGTTCTGCAGGAAGATTTCAAGGCT
ACCGAGATCGAGGTAAACACAAAAGCCCCTTTTTCCCAAGTTAAAATTTCTGTTCTGTAA
TATGTGGTGTTTATATCAATACCCTATGATTGGCAGGTCGGTGTTGTGAGGAAAGAAGAC
CGTGTCTTCCGGTCACTCACGACAGAGGAGATTGATCAGCACCTAACAGCCATTAGCGAG
CGCGACTGAGCTATGTGACTGTAGCTGTCAATGCACCCATAAACTGTTATTTTGTTTCAT
GGCCAGCCAAGAAACATTCAGTGAATCATTTCATGTGTAGCAAGAAAGACGGGCCTCCAC
TCTGCCATGTATTAGTCGGATCATCCTTTGTGTGGTTGAATTTGCTACGATTAAATTTGA
TGTTGCTGGCAGTTGCATGTTTGGGCTGTTTTATTTTCTTCTCCTGTCTCTATGTGGTGC
TGCCACTCTTTCGATGTTAAGTTTGGCCATCAATTTGACCAAGGACACAACTCTTGTAGT
TTTCCAATGGTACCGCAACATCTGGGCAACCTTCTCAGAAGCGTTTTCAGGGAACGCCAA
GCTTTATGCTAAAACAACTAAAGTTGACATGGCATTTTTGTAGGATTTGCCATGATTGAA
GGCGAAAATTACGTTTTGCAGAAAAATTGTTCCTTCGTTCTAACGTGATTCCAGGGCTTT
GAAGACGTTAGCTGGGAAGCCTAAAAAGTGGCAAAAAGAAAATGCCATGTAGCCTCGAAA
AACAGGAAAAATTGCTACGTTTCGATGGCTTTGGCGGCGTTGGCTGGGAAGCCTGAAAAA
TTTGAACGTTTGTCAGTTATCATTTCTTGTTTATTTACAGAGGGACTAGATTAGATTAAA
AAGCACTGTCACGTGCAAATATAATCTAAAAATCAAGGCTAGAGCGGCATCCTTGGTTTA
GAAATCACACTAGAAAACATTGGCACGTGCAAATATACTCTTAAAACTAAAGGCTAGAGG
GGTAGAGAATGGCGCTTTGGAGCTCGGCCCTCATAGAGGCTGAAATTTTTGAAAAAATCA
AAATTTGAAAAATCGGAAAAAATAATCTTATCTTATCTTACCTTTTACCTACTAATAAAG
CAAATATTGTTTCTTCCATACGTCATCCAAATTGCTTTTAAAGTTGACTAAAATTACCCA
CCAATGTCATCTATAAGTCATAAAAAATGTTTCAAACAGGAAAATCTATGGACTGAGCCG
GCCCATGTAGGCACCTTCTATATTACGCTCTGGGCGTTGGAAAAAGATGCAGCACACCTT
TTTGGGCCGGCCCATGCGTGG